Wall clock time and date at job start Mon Mar 30 2020 07:07:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53001 * 109.47178 * 2 1 4 4 N 1.46901 * 109.47391 * 180.02562 * 3 2 1 5 5 C 1.46894 * 110.99978 * 180.02562 * 4 3 2 6 6 C 1.52998 * 109.47091 * 179.97438 * 5 4 3 7 7 C 1.53003 * 109.47184 * 180.02562 * 6 5 4 8 8 O 1.42904 * 109.47099 * 180.02562 * 7 6 5 9 9 C 1.35670 * 117.00011 * 179.97438 * 8 7 6 10 10 C 1.39317 * 119.81652 * 359.72382 * 9 8 7 11 11 C 1.36442 * 120.18330 * 179.76018 * 10 9 8 12 12 C 1.40836 * 119.81102 * 0.51543 * 11 10 9 13 13 C 1.41216 * 120.17949 * 179.72017 * 12 11 10 14 14 H 1.08000 * 119.99881 * 204.56305 * 13 12 11 15 15 C 1.39893 * 119.99776 * 24.56420 * 13 12 11 16 16 N 1.30880 * 120.00328 * 17.92398 * 15 13 12 17 17 Si 1.86801 * 119.99652 * 197.92340 * 15 13 12 18 18 H 1.48505 * 109.46934 * 90.00185 * 17 15 13 19 19 H 1.48495 * 109.46999 * 209.99650 * 17 15 13 20 20 H 1.48499 * 109.47289 * 330.00281 * 17 15 13 21 21 C 1.40840 * 119.64201 * 359.73675 * 12 11 10 22 22 C 1.36437 * 119.81170 * 0.02562 * 21 12 11 23 23 H 1.08999 * 109.47437 * 59.99494 * 1 2 3 24 24 H 1.09000 * 109.46788 * 180.02562 * 1 2 3 25 25 H 1.09002 * 109.46815 * 299.99527 * 1 2 3 26 26 H 1.09002 * 109.46815 * 240.00473 * 2 1 3 27 27 H 1.08999 * 109.47437 * 120.00506 * 2 1 3 28 28 H 1.09002 * 109.46861 * 60.00501 * 3 2 1 29 29 H 1.08999 * 109.47349 * 300.00559 * 3 2 1 30 30 H 1.00898 * 110.99696 * 303.95309 * 4 3 2 31 31 H 1.09003 * 109.47489 * 59.99952 * 5 4 3 32 32 H 1.09004 * 109.47481 * 300.00154 * 5 4 3 33 33 H 1.09004 * 109.46781 * 60.00270 * 6 5 4 34 34 H 1.09000 * 109.47270 * 299.99733 * 6 5 4 35 35 H 1.08994 * 109.47305 * 59.99872 * 7 6 5 36 36 H 1.09007 * 109.47240 * 299.99558 * 7 6 5 37 37 H 1.07998 * 119.90759 * 0.02562 * 10 9 8 38 38 H 1.08001 * 120.09447 * 180.25025 * 11 10 9 39 39 H 0.96998 * 119.99635 * 180.02562 * 16 15 13 40 40 H 1.07993 * 120.09165 * 179.97438 * 21 12 11 41 41 H 1.07993 * 119.90814 * 179.97438 * 22 21 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 7 3.5090 1.4426 -0.0006 5 6 4.0354 2.8140 0.0000 6 6 5.5648 2.7732 0.0000 7 6 6.1131 4.2016 0.0012 8 8 7.5416 4.1635 0.0006 9 6 8.1896 5.3555 0.0010 10 6 7.4584 6.5414 -0.0038 11 6 8.1024 7.7443 0.0016 12 6 9.5101 7.7849 0.0010 13 6 10.1846 9.0256 0.0005 14 1 11.1897 9.0937 -0.3887 15 6 9.5507 10.1664 0.5043 16 7 8.5049 10.0446 1.2817 17 14 10.1970 11.8637 0.0672 18 1 9.5308 12.3435 -1.1703 19 1 9.9103 12.8041 1.1801 20 1 11.6634 11.7927 -0.1557 21 6 10.2417 6.5814 0.0005 22 6 9.5824 5.3869 0.0001 23 1 -0.3634 0.5139 -0.8899 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3633 0.5138 0.8901 26 1 1.8933 -0.5138 -0.8901 27 1 1.8934 -0.5139 0.8899 28 1 1.6767 1.9563 0.8901 29 1 1.6766 1.9564 -0.8899 30 1 3.8709 0.9163 0.7805 31 1 3.6863 3.3368 0.8904 32 1 3.6855 3.3379 -0.8895 33 1 5.9143 2.2503 -0.8903 34 1 5.9144 2.2495 0.8897 35 1 5.7636 4.7242 0.8916 36 1 5.7637 4.7258 -0.8884 37 1 6.3790 6.5084 -0.0074 38 1 7.5341 8.6627 0.0019 39 1 8.0653 10.8357 1.6306 40 1 11.3214 6.6040 -0.0004 41 1 10.1418 4.4631 -0.0007 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000020525093.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:07:25 Heat of formation + Delta-G solvation = -42.954882 kcal Electronic energy + Delta-G solvation = -18539.165585 eV Core-core repulsion = 15611.055294 eV Total energy + Delta-G solvation = -2928.110292 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 263.163 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -38.82028 -37.36082 -36.36559 -34.10050 -33.27624 -31.13193 -29.61663 -28.99702 -26.37024 -24.77872 -23.60649 -22.02899 -21.44189 -20.75004 -20.12780 -17.33979 -16.94123 -16.48735 -15.53956 -15.48500 -15.09561 -14.81303 -14.18523 -14.05897 -13.91233 -13.17140 -13.00656 -12.70342 -12.47503 -12.34166 -12.05493 -11.88244 -11.78332 -11.48763 -11.24111 -11.15393 -11.07839 -10.99187 -10.87848 -10.75928 -10.48253 -9.84190 -9.76396 -9.34716 -8.99938 -8.67446 -7.63562 -6.99608 -6.71521 -4.23769 2.78185 2.98251 3.08927 3.12485 3.22875 3.70384 3.95977 4.33170 4.62916 4.63830 4.74411 4.96569 5.05591 5.17337 5.26809 5.33989 5.39324 5.45333 5.53512 5.68057 5.69685 5.71677 5.73958 5.86615 5.93735 6.14492 6.17163 6.22311 6.31359 6.75588 6.79122 6.91414 7.08356 7.13656 7.29811 7.43512 7.57786 7.93086 8.01875 8.17310 8.47152 8.67354 8.91587 9.01238 10.23215 Molecular weight = 263.16amu Principal moments of inertia in cm(-1) A = 0.039461 B = 0.002712 C = 0.002563 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 709.385651 B =10321.439962 C =10922.935462 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.123 4.123 3 C 0.057 3.943 4 N -0.691 5.691 5 C 0.062 3.938 6 C -0.115 4.115 7 C 0.071 3.929 8 O -0.330 6.330 9 C -0.008 4.008 10 C -0.174 4.174 11 C -0.134 4.134 12 C 0.086 3.914 13 C -0.463 4.463 14 H 0.077 0.923 15 C 0.074 3.926 16 N -0.801 5.801 17 Si 0.908 3.092 18 H -0.269 1.269 19 H -0.279 1.279 20 H -0.263 1.263 21 C -0.196 4.196 22 C -0.114 4.114 23 H 0.055 0.945 24 H 0.056 0.944 25 H 0.052 0.948 26 H 0.071 0.929 27 H 0.060 0.940 28 H 0.029 0.971 29 H 0.072 0.928 30 H 0.341 0.659 31 H 0.032 0.968 32 H 0.075 0.925 33 H 0.079 0.921 34 H 0.068 0.932 35 H 0.049 0.951 36 H 0.050 0.950 37 H 0.094 0.906 38 H 0.121 0.879 39 H 0.279 0.721 40 H 0.100 0.900 41 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.127 -11.960 -0.985 17.061 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.161 4.161 3 C -0.072 4.072 4 N -0.322 5.322 5 C -0.067 4.067 6 C -0.153 4.153 7 C -0.006 4.006 8 O -0.246 6.246 9 C -0.051 4.051 10 C -0.193 4.193 11 C -0.154 4.154 12 C 0.084 3.916 13 C -0.493 4.493 14 H 0.095 0.905 15 C -0.142 4.142 16 N -0.427 5.427 17 Si 0.733 3.267 18 H -0.194 1.194 19 H -0.204 1.204 20 H -0.187 1.187 21 C -0.215 4.215 22 C -0.133 4.133 23 H 0.074 0.926 24 H 0.075 0.925 25 H 0.072 0.928 26 H 0.089 0.911 27 H 0.078 0.922 28 H 0.047 0.953 29 H 0.090 0.910 30 H 0.158 0.842 31 H 0.050 0.950 32 H 0.093 0.907 33 H 0.097 0.903 34 H 0.086 0.914 35 H 0.067 0.933 36 H 0.069 0.931 37 H 0.112 0.888 38 H 0.139 0.861 39 H 0.090 0.910 40 H 0.118 0.882 41 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -12.155 -12.059 -1.523 17.190 hybrid contribution -0.190 1.356 0.888 1.632 sum -12.345 -10.704 -0.635 16.352 Atomic orbital electron populations 1.21733 0.95565 1.01771 1.01861 1.21512 0.95590 0.96394 1.02632 1.22017 0.87581 0.97021 1.00629 1.60446 1.07304 1.14295 1.50181 1.21834 0.94536 0.89407 1.00922 1.21437 0.93663 0.96424 1.03756 1.22330 0.81328 0.96434 1.00521 1.85777 1.18087 1.29427 1.91297 1.18578 0.91483 0.83015 1.11996 1.20622 0.97556 0.93120 1.08007 1.20946 0.94907 0.95916 1.03582 1.17609 0.91821 0.92361 0.89845 1.19473 1.01412 0.92127 1.36303 0.90476 1.25881 0.94308 1.01417 0.92634 1.69844 1.18158 1.31845 1.22867 0.86323 0.80342 0.81152 0.78933 1.19378 1.20438 1.18666 1.20597 0.97902 0.91790 1.11260 1.19622 0.90601 0.97371 1.05733 0.92583 0.92532 0.92847 0.91054 0.92162 0.95320 0.90985 0.84159 0.94968 0.90697 0.90277 0.91355 0.93309 0.93146 0.88792 0.86130 0.91035 0.88209 0.88514 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.94 9.91 37.16 0.37 -0.57 16 2 C -0.12 -0.90 6.19 -26.73 -0.17 -1.06 16 3 C 0.06 0.49 5.69 -3.82 -0.02 0.46 16 4 N -0.69 -6.88 6.50 -113.78 -0.74 -7.62 16 5 C 0.06 0.68 5.68 -3.83 -0.02 0.66 16 6 C -0.11 -1.49 5.84 -26.73 -0.16 -1.65 16 7 C 0.07 1.16 4.73 37.16 0.18 1.34 16 8 O -0.33 -6.91 10.12 -18.71 -0.19 -7.10 16 9 C -0.01 -0.18 6.71 -38.78 -0.26 -0.44 16 10 C -0.17 -4.18 8.96 -39.83 -0.36 -4.53 16 11 C -0.13 -3.54 8.64 -39.25 -0.34 -3.87 16 12 C 0.09 2.33 5.57 -106.80 -0.60 1.73 16 13 C -0.46 -12.41 9.04 -37.83 -0.34 -12.75 16 14 H 0.08 1.98 7.91 -52.49 -0.41 1.57 16 15 C 0.07 1.88 5.13 -17.34 -0.09 1.79 16 16 N -0.80 -20.92 10.96 55.54 0.61 -20.31 16 17 Si 0.91 18.85 29.60 -169.99 -5.03 13.82 16 18 H -0.27 -5.51 7.11 56.52 0.40 -5.11 16 19 H -0.28 -5.67 7.11 56.52 0.40 -5.27 16 20 H -0.26 -5.39 7.11 56.52 0.40 -4.98 16 21 C -0.20 -4.91 9.74 -39.25 -0.38 -5.29 16 22 C -0.11 -2.72 9.92 -39.83 -0.40 -3.12 16 23 H 0.06 0.34 8.14 -51.93 -0.42 -0.08 16 24 H 0.06 0.31 8.14 -51.93 -0.42 -0.11 16 25 H 0.05 0.32 8.14 -51.93 -0.42 -0.10 16 26 H 0.07 0.56 8.14 -51.93 -0.42 0.14 16 27 H 0.06 0.42 8.14 -51.93 -0.42 0.00 16 28 H 0.03 0.24 8.14 -51.93 -0.42 -0.18 16 29 H 0.07 0.63 8.14 -51.93 -0.42 0.21 16 30 H 0.34 3.06 8.73 -39.29 -0.34 2.72 16 31 H 0.03 0.35 8.14 -51.93 -0.42 -0.08 16 32 H 0.07 0.82 8.14 -51.93 -0.42 0.40 16 33 H 0.08 1.07 8.14 -51.93 -0.42 0.64 16 34 H 0.07 0.87 8.14 -51.93 -0.42 0.44 16 35 H 0.05 0.80 7.66 -51.93 -0.40 0.40 16 36 H 0.05 0.81 7.63 -51.92 -0.40 0.42 16 37 H 0.09 2.01 6.27 -52.49 -0.33 1.68 16 38 H 0.12 3.25 6.16 -52.49 -0.32 2.93 16 39 H 0.28 6.63 8.30 -40.82 -0.34 6.29 16 40 H 0.10 2.31 8.06 -52.49 -0.42 1.89 16 41 H 0.10 2.07 8.06 -52.49 -0.42 1.65 16 LS Contribution 338.62 15.07 5.10 5.10 Total: -1.00 -28.29 338.62 -9.66 -37.95 By element: Atomic # 1 Polarization: 12.30 SS G_CDS: -6.83 Total: 5.46 kcal Atomic # 6 Polarization: -24.72 SS G_CDS: -2.58 Total: -27.31 kcal Atomic # 7 Polarization: -27.80 SS G_CDS: -0.13 Total: -27.93 kcal Atomic # 8 Polarization: -6.91 SS G_CDS: -0.19 Total: -7.10 kcal Atomic # 14 Polarization: 18.85 SS G_CDS: -5.03 Total: 13.82 kcal Total LS contribution 5.10 Total: 5.10 kcal Total: -28.29 -9.66 -37.95 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000020525093.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -5.000 kcal (2) G-P(sol) polarization free energy of solvation -28.290 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.290 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.665 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.955 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.955 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds