Wall clock time and date at job start Mon Mar 30 2020 06:20:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.53003 * 109.47376 * 2 1 4 4 N 1.46504 * 109.47072 * 119.99900 * 2 1 3 5 5 N 1.28259 * 124.14644 * 300.02302 * 4 2 1 6 6 C 1.32312 * 112.90787 * 179.97438 * 5 4 2 7 7 C 1.40836 * 135.15641 * 180.02562 * 6 5 4 8 8 C 1.36151 * 119.68173 * 179.97438 * 7 6 5 9 9 C 1.39203 * 121.78942 * 0.02562 * 8 7 6 10 10 Cl 1.73595 * 119.38452 * 180.02562 * 9 8 7 11 11 C 1.37945 * 121.23076 * 359.97438 * 9 8 7 12 12 C 1.38950 * 119.36459 * 359.97438 * 11 9 8 13 13 C 1.37431 * 124.15158 * 119.72618 * 4 2 1 14 14 C 1.39037 * 127.45956 * 359.97438 * 13 4 2 15 15 H 1.08000 * 119.99874 * 29.29588 * 14 13 4 16 16 C 1.40348 * 119.99718 * 209.30318 * 14 13 4 17 17 N 1.30694 * 120.00058 * 18.47526 * 16 14 13 18 18 Si 1.86804 * 119.99750 * 198.47321 * 16 14 13 19 19 H 1.48497 * 109.47158 * 90.00155 * 18 16 14 20 20 H 1.48500 * 109.46877 * 209.99968 * 18 16 14 21 21 H 1.48503 * 109.47023 * 329.99633 * 18 16 14 22 22 H 1.09004 * 109.46392 * 60.00114 * 1 2 3 23 23 H 1.09000 * 109.47204 * 300.00599 * 1 2 3 24 24 H 1.08998 * 109.47251 * 180.02562 * 1 2 3 25 25 H 1.08998 * 109.47692 * 239.99580 * 2 1 3 26 26 H 1.09000 * 109.47443 * 59.99548 * 3 2 1 27 27 H 1.08998 * 109.47489 * 180.02562 * 3 2 1 28 28 H 1.09006 * 109.46798 * 299.99566 * 3 2 1 29 29 H 1.08004 * 120.16329 * 359.93222 * 7 6 5 30 30 H 1.08000 * 119.10772 * 180.02562 * 8 7 6 31 31 H 1.08005 * 120.31550 * 179.97438 * 11 9 8 32 32 H 0.97003 * 119.99655 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 7 2.0183 -0.6906 1.1962 5 7 1.7576 -0.3226 2.3969 6 6 2.3113 -1.1065 3.3076 7 6 2.3341 -1.1403 4.7154 8 6 3.0274 -2.1221 5.3551 9 6 3.7227 -3.1041 4.6551 10 17 4.5855 -4.3272 5.5343 11 6 3.7380 -3.1241 3.2759 12 6 3.0459 -2.1458 2.5726 13 6 2.8072 -1.8156 1.1696 14 6 3.2774 -2.4924 0.0497 15 1 3.4562 -1.9554 -0.8701 16 6 3.5195 -3.8733 0.1147 17 7 2.9823 -4.5867 1.0690 18 14 4.6094 -4.6916 -1.1628 19 1 6.0187 -4.6741 -0.6955 20 1 4.1709 -6.0965 -1.3608 21 1 4.5047 -3.9547 -2.4479 22 1 -0.3632 0.5139 -0.8901 23 1 -0.3633 0.5139 0.8899 24 1 -0.3633 -1.0276 0.0005 25 1 1.8934 -0.5139 -0.8899 26 1 1.6767 1.9564 0.8899 27 1 3.1301 1.4425 -0.0005 28 1 1.6768 1.9563 -0.8901 29 1 1.8046 -0.3907 5.2849 30 1 3.0382 -2.1394 6.4349 31 1 4.2827 -3.8927 2.7478 32 1 3.1500 -5.5411 1.1140 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000220622414.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:20:01 Heat of formation + Delta-G solvation = 60.442308 kcal Electronic energy + Delta-G solvation = -17688.578403 eV Core-core repulsion = 14868.568814 eV Total energy + Delta-G solvation = -2820.009588 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 264.072 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -40.37779 -36.73238 -35.20690 -34.30625 -33.81094 -30.40619 -28.91707 -28.36571 -26.87006 -25.30732 -23.09964 -21.26459 -20.11876 -19.17041 -17.25629 -16.26870 -15.74739 -15.20564 -14.41700 -14.31244 -13.87782 -13.43690 -12.96156 -12.69634 -12.53912 -12.06075 -11.91893 -11.84796 -11.67679 -11.55395 -11.39541 -10.88829 -10.81189 -10.77700 -10.61276 -10.24440 -9.86453 -9.78024 -9.45390 -8.68034 -8.44172 -7.38762 -7.16391 -6.54536 -4.60258 2.06978 2.78967 2.88534 2.91885 3.00281 3.41721 3.60336 3.76675 3.85521 4.64211 5.14026 5.20395 5.47456 5.54562 5.72120 5.86303 5.98570 6.06553 6.12880 6.15965 6.38167 6.46003 6.57398 6.62280 6.70456 6.73129 6.93558 7.22922 7.36838 7.53826 7.68578 7.87584 8.04599 8.25175 8.31395 8.65926 9.75897 9.87571 Molecular weight = 264.07amu Principal moments of inertia in cm(-1) A = 0.013947 B = 0.009905 C = 0.006141 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2007.129455 B = 2826.075283 C = 4558.125238 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.161 3.839 3 C -0.157 4.157 4 N -0.330 5.330 5 N -0.401 5.401 6 C 0.103 3.897 7 C -0.149 4.149 8 C -0.064 4.064 9 C -0.169 4.169 10 Cl -0.127 7.127 11 C 0.056 3.944 12 C -0.235 4.235 13 C 0.261 3.739 14 C -0.440 4.440 15 H 0.092 0.908 16 C 0.084 3.916 17 N -0.750 5.750 18 Si 0.920 3.080 19 H -0.261 1.261 20 H -0.272 1.272 21 H -0.258 1.258 22 H 0.062 0.938 23 H 0.065 0.935 24 H 0.058 0.942 25 H 0.098 0.902 26 H 0.066 0.934 27 H 0.055 0.945 28 H 0.062 0.938 29 H 0.106 0.894 30 H 0.106 0.894 31 H 0.116 0.884 32 H 0.293 0.707 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.184 2.248 -2.848 3.633 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C 0.059 3.941 3 C -0.215 4.215 4 N -0.113 5.113 5 N -0.229 5.229 6 C -0.050 4.050 7 C -0.171 4.171 8 C -0.086 4.086 9 C -0.197 4.197 10 Cl -0.100 7.100 11 C 0.036 3.964 12 C -0.244 4.244 13 C 0.137 3.863 14 C -0.475 4.475 15 H 0.110 0.890 16 C -0.142 4.142 17 N -0.373 5.373 18 Si 0.743 3.257 19 H -0.186 1.186 20 H -0.197 1.197 21 H -0.182 1.182 22 H 0.081 0.919 23 H 0.084 0.916 24 H 0.077 0.923 25 H 0.116 0.884 26 H 0.085 0.915 27 H 0.074 0.926 28 H 0.081 0.919 29 H 0.125 0.875 30 H 0.124 0.876 31 H 0.133 0.867 32 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -0.597 3.066 -2.904 4.265 hybrid contribution 0.966 -1.345 -0.355 1.693 sum 0.369 1.721 -3.259 3.704 Atomic orbital electron populations 1.22035 0.94458 1.02537 1.02081 1.21008 0.94739 0.92839 0.85528 1.22099 1.01439 0.95665 1.02268 1.45501 1.38006 1.23843 1.03964 1.72576 1.31247 1.29913 0.89133 1.20310 0.97569 0.93605 0.93484 1.19229 1.06446 1.01365 0.90028 1.19919 0.96905 0.93781 0.97988 1.19910 1.10961 0.97569 0.91298 1.98222 1.77554 1.56934 1.77242 1.19912 0.92359 0.94066 0.90095 1.19899 1.11429 1.01788 0.91281 1.19769 0.88618 0.84828 0.93128 1.18482 1.38866 0.92921 0.97207 0.88987 1.25937 0.94322 0.97076 0.96897 1.69789 1.30130 1.08986 1.28426 0.86099 0.80554 0.78591 0.80502 1.18554 1.19697 1.18208 0.91924 0.91571 0.92295 0.88406 0.91463 0.92569 0.91890 0.87546 0.87558 0.86652 0.89526 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.47 9.35 37.16 0.35 -2.12 16 2 C 0.16 2.92 3.54 -67.93 -0.24 2.68 16 3 C -0.16 -2.44 9.35 37.16 0.35 -2.09 16 4 N -0.33 -7.63 3.10 -50.65 -0.16 -7.78 16 5 N -0.40 -9.90 11.37 33.19 0.38 -9.52 16 6 C 0.10 2.61 7.51 -83.14 -0.62 1.99 16 7 C -0.15 -3.36 10.09 -39.35 -0.40 -3.76 16 8 C -0.06 -1.37 9.65 -39.97 -0.39 -1.75 16 9 C -0.17 -3.83 6.32 -39.33 -0.25 -4.07 16 10 Cl -0.13 -2.52 28.91 -51.86 -1.50 -4.02 16 11 C 0.06 1.38 8.58 -39.42 -0.34 1.04 16 12 C -0.23 -6.10 5.96 -102.95 -0.61 -6.71 16 13 C 0.26 6.51 6.56 -81.91 -0.54 5.98 16 14 C -0.44 -10.23 8.62 -38.49 -0.33 -10.56 16 15 H 0.09 1.96 7.25 -52.49 -0.38 1.58 16 16 C 0.08 1.87 5.11 -17.24 -0.09 1.78 16 17 N -0.75 -17.67 10.17 55.57 0.56 -17.11 16 18 Si 0.92 16.50 29.60 -169.99 -5.03 11.47 16 19 H -0.26 -4.73 7.11 56.52 0.40 -4.33 16 20 H -0.27 -4.81 7.11 56.52 0.40 -4.40 16 21 H -0.26 -4.49 7.11 56.52 0.40 -4.09 16 22 H 0.06 0.78 8.14 -51.93 -0.42 0.36 16 23 H 0.07 1.13 8.12 -51.93 -0.42 0.71 16 24 H 0.06 1.02 8.14 -51.93 -0.42 0.60 16 25 H 0.10 1.69 6.82 -51.93 -0.35 1.33 16 26 H 0.07 1.12 8.13 -51.93 -0.42 0.70 16 27 H 0.06 0.91 8.14 -51.93 -0.42 0.48 16 28 H 0.06 0.76 8.14 -51.93 -0.42 0.34 16 29 H 0.11 2.16 8.06 -52.48 -0.42 1.73 16 30 H 0.11 1.98 8.06 -52.49 -0.42 1.55 16 31 H 0.12 2.84 6.48 -52.48 -0.34 2.50 16 32 H 0.29 6.28 8.29 -40.82 -0.34 5.94 16 LS Contribution 288.89 15.07 4.35 4.35 Total: -1.00 -27.11 288.89 -8.09 -35.20 By element: Atomic # 1 Polarization: 8.61 SS G_CDS: -3.59 Total: 5.02 kcal Atomic # 6 Polarization: -14.50 SS G_CDS: -3.11 Total: -17.61 kcal Atomic # 7 Polarization: -35.19 SS G_CDS: 0.79 Total: -34.41 kcal Atomic # 14 Polarization: 16.50 SS G_CDS: -5.03 Total: 11.47 kcal Atomic # 17 Polarization: -2.52 SS G_CDS: -1.50 Total: -4.02 kcal Total LS contribution 4.35 Total: 4.35 kcal Total: -27.11 -8.09 -35.20 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000220622414.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 95.640 kcal (2) G-P(sol) polarization free energy of solvation -27.105 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 68.535 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.093 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.198 kcal (6) G-S(sol) free energy of system = (1) + (5) 60.442 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds