Wall clock time and date at job start Mon Mar 30 2020 06:54:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 O 1.21298 * 120.00118 * 2 1 4 4 C 1.46864 * 119.99872 * 180.02562 * 2 1 3 5 5 C 1.40036 * 120.11344 * 0.26777 * 4 2 1 6 6 C 1.37117 * 119.88334 * 180.23019 * 5 4 2 7 7 C 1.39080 * 120.11437 * 359.52048 * 6 5 4 8 8 O 1.35661 * 119.88619 * 180.25876 * 7 6 5 9 9 C 1.42909 * 116.99973 * 180.02562 * 8 7 6 10 10 C 1.52995 * 109.46870 * 179.97438 * 9 8 7 11 11 O 1.42895 * 109.47388 * 64.99585 * 10 9 8 12 12 C 1.42906 * 114.00306 * 179.97438 * 11 10 9 13 13 C 1.50695 * 109.47279 * 180.02562 * 12 11 10 14 14 H 1.08001 * 120.00117 * 0.02562 * 13 12 11 15 15 C 1.37881 * 120.00034 * 179.97438 * 13 12 11 16 16 N 1.31514 * 119.99837 * 359.97438 * 15 13 12 17 17 Si 1.86797 * 119.99898 * 180.02562 * 15 13 12 18 18 H 1.48493 * 109.47397 * 60.00240 * 17 15 13 19 19 H 1.48508 * 109.46767 * 180.02562 * 17 15 13 20 20 H 1.48501 * 109.47350 * 299.99734 * 17 15 13 21 21 C 1.39087 * 120.22860 * 0.22946 * 7 6 5 22 22 C 1.37108 * 120.11543 * 0.02562 * 21 7 6 23 23 H 1.09001 * 109.46860 * 239.99964 * 1 2 3 24 24 H 1.09002 * 109.47041 * 359.97438 * 1 2 3 25 25 H 1.08998 * 109.47149 * 119.99678 * 1 2 3 26 26 H 1.08004 * 120.06199 * 0.03238 * 5 4 2 27 27 H 1.08002 * 119.94651 * 179.80050 * 6 5 4 28 28 H 1.08996 * 109.46968 * 299.99427 * 9 8 7 29 29 H 1.08994 * 109.47008 * 59.99466 * 9 8 7 30 30 H 1.09000 * 109.47059 * 185.00265 * 10 9 8 31 31 H 1.09006 * 109.47167 * 304.99955 * 10 9 8 32 32 H 1.09006 * 109.46830 * 300.00436 * 12 11 10 33 33 H 1.08996 * 109.47025 * 60.00236 * 12 11 10 34 34 H 0.96995 * 119.99919 * 179.97438 * 16 15 13 35 35 H 1.07999 * 119.93759 * 180.02562 * 21 7 6 36 36 H 1.08004 * 120.05991 * 180.02562 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1135 1.0505 0.0000 4 6 2.2413 -1.2719 -0.0006 5 6 1.5435 -2.4860 -0.0068 6 6 2.2338 -3.6707 -0.0025 7 6 3.6246 -3.6680 -0.0021 8 8 4.3029 -4.8428 -0.0032 9 6 5.7300 -4.7681 -0.0021 10 6 6.3147 -6.1819 -0.0029 11 8 5.9714 -6.8387 -1.2247 12 6 6.4723 -8.1731 -1.3280 13 6 6.0536 -8.7660 -2.6486 14 1 5.4642 -8.1822 -3.3401 15 6 6.4237 -10.0536 -2.9745 16 7 7.1427 -10.7640 -2.1331 17 14 5.9052 -10.7883 -4.6118 18 1 6.4543 -9.9660 -5.7195 19 1 6.4257 -12.1751 -4.7190 20 1 4.4228 -10.8085 -4.6981 21 6 4.3224 -2.4649 -0.0012 22 6 3.6417 -1.2747 -0.0002 23 1 -0.3633 -0.5139 0.8900 24 1 -0.3633 1.0277 0.0005 25 1 -0.3633 -0.5138 -0.8900 26 1 0.4635 -2.4893 -0.0117 27 1 1.6966 -4.6077 -0.0040 28 1 6.0665 -4.2349 -0.8912 29 1 6.0653 -4.2370 0.8887 30 1 7.3995 -6.1264 0.0875 31 1 5.9083 -6.7437 0.8382 32 1 7.5605 -8.1585 -1.2653 33 1 6.0696 -8.7763 -0.5144 34 1 7.4027 -11.6700 -2.3622 35 1 5.4024 -2.4682 -0.0013 36 1 4.1845 -0.3410 0.0001 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000292744024.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:54:03 Heat of formation + Delta-G solvation = -104.629019 kcal Electronic energy + Delta-G solvation = -18531.399545 eV Core-core repulsion = 15367.063106 eV Total energy + Delta-G solvation = -3164.336439 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 264.119 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -40.49437 -39.33143 -37.41780 -36.44232 -32.82205 -31.87799 -31.40926 -29.95643 -28.83886 -26.97303 -23.91102 -23.23426 -22.37588 -21.64584 -19.97316 -18.47530 -16.79023 -16.55361 -16.32225 -16.11255 -15.23231 -15.08535 -14.87573 -14.81276 -14.47953 -14.24255 -13.81336 -13.48968 -13.16579 -12.76260 -12.64519 -12.42914 -12.35403 -11.91853 -11.59621 -11.13945 -11.03035 -10.84331 -10.80784 -10.58934 -10.08626 -9.95960 -9.31421 -9.17778 -8.91442 -8.34302 -8.25132 -6.14599 -4.16548 0.56042 1.18858 2.25479 3.13957 3.30549 3.33110 3.37109 3.62920 3.90316 4.28829 4.52956 4.62236 4.65997 4.82971 4.96745 5.05086 5.10359 5.13436 5.21947 5.28080 5.30171 5.35915 5.60819 5.74025 5.80461 5.84467 5.99188 6.06453 6.14588 6.20586 6.50579 7.00782 7.32875 7.35022 7.36124 7.74938 8.09075 8.48158 8.95530 9.48292 10.96922 Molecular weight = 264.12amu Principal moments of inertia in cm(-1) A = 0.034249 B = 0.003022 C = 0.002876 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 817.345537 B = 9262.141624 C = 9733.608456 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C 0.400 3.600 3 O -0.471 6.471 4 C -0.230 4.230 5 C -0.030 4.030 6 C -0.170 4.170 7 C 0.178 3.822 8 O -0.291 6.291 9 C 0.062 3.938 10 C 0.062 3.938 11 O -0.390 6.390 12 C 0.195 3.805 13 C -0.517 4.517 14 H 0.066 0.934 15 C 0.057 3.943 16 N -0.899 5.899 17 Si 0.909 3.091 18 H -0.274 1.274 19 H -0.286 1.286 20 H -0.274 1.274 21 C -0.230 4.230 22 C -0.016 4.016 23 H 0.093 0.907 24 H 0.082 0.918 25 H 0.093 0.907 26 H 0.137 0.863 27 H 0.140 0.860 28 H 0.073 0.927 29 H 0.073 0.927 30 H 0.063 0.937 31 H 0.050 0.950 32 H 0.006 0.994 33 H 0.007 0.993 34 H 0.265 0.735 35 H 0.135 0.865 36 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.925 17.463 7.010 21.275 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.258 4.258 2 C 0.280 3.720 3 O -0.348 6.348 4 C -0.231 4.231 5 C -0.048 4.048 6 C -0.188 4.188 7 C 0.130 3.870 8 O -0.203 6.203 9 C -0.013 4.013 10 C -0.016 4.016 11 O -0.310 6.310 12 C 0.121 3.879 13 C -0.555 4.555 14 H 0.085 0.915 15 C -0.145 4.145 16 N -0.538 5.538 17 Si 0.736 3.264 18 H -0.200 1.200 19 H -0.211 1.211 20 H -0.199 1.199 21 C -0.248 4.248 22 C -0.034 4.034 23 H 0.111 0.889 24 H 0.101 0.899 25 H 0.112 0.888 26 H 0.155 0.845 27 H 0.157 0.843 28 H 0.091 0.909 29 H 0.091 0.909 30 H 0.081 0.919 31 H 0.068 0.932 32 H 0.024 0.976 33 H 0.025 0.975 34 H 0.075 0.925 35 H 0.153 0.847 36 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -9.688 17.689 6.881 21.310 hybrid contribution 0.206 -0.671 -0.572 0.905 sum -9.482 17.019 6.309 20.478 Atomic orbital electron populations 1.22249 0.94035 1.04941 1.04531 1.22336 0.91524 0.87577 0.70582 1.90532 1.72237 1.34438 1.37627 1.20313 0.94459 0.94681 1.13618 1.21084 0.99884 0.90578 0.93284 1.20368 0.91095 0.99527 1.07817 1.19559 0.92214 0.85215 0.90019 1.86219 1.20906 1.27116 1.86055 1.23086 0.77520 0.99060 1.01645 1.22285 0.97662 0.90990 0.90636 1.87922 1.77470 1.30973 1.34662 1.20236 0.93439 0.76673 0.97564 1.21008 1.34085 0.98424 1.01959 0.91547 1.24951 0.95038 0.96578 0.97903 1.69947 1.37246 1.10555 1.36054 0.86373 0.79065 0.77881 0.83035 1.19986 1.21122 1.19948 1.21187 1.00894 0.91950 1.10799 1.21041 0.93103 0.97972 0.91311 0.88887 0.89922 0.88824 0.84535 0.84254 0.90883 0.90925 0.91945 0.93153 0.97608 0.97495 0.92538 0.84722 0.84903 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -1.24 8.92 36.01 0.32 -0.92 16 2 C 0.40 4.11 7.22 -30.82 -0.22 3.89 16 3 O -0.47 -6.42 17.07 5.54 0.09 -6.33 16 4 C -0.23 -2.46 5.87 -105.06 -0.62 -3.08 16 5 C -0.03 -0.28 9.44 -39.31 -0.37 -0.65 16 6 C -0.17 -1.97 9.95 -39.68 -0.39 -2.37 16 7 C 0.18 2.40 6.70 -38.95 -0.26 2.13 16 8 O -0.29 -4.65 10.09 -23.54 -0.24 -4.88 16 9 C 0.06 0.87 5.11 37.15 0.19 1.06 16 10 C 0.06 1.09 6.32 37.15 0.23 1.32 16 11 O -0.39 -9.33 10.29 -40.09 -0.41 -9.74 16 12 C 0.19 5.30 5.69 36.00 0.20 5.50 16 13 C -0.52 -15.20 9.43 -34.44 -0.32 -15.52 16 14 H 0.07 1.94 7.81 -52.49 -0.41 1.53 16 15 C 0.06 1.63 5.46 -17.82 -0.10 1.53 16 16 N -0.90 -26.72 13.29 55.43 0.74 -25.98 16 17 Si 0.91 21.76 29.54 -169.99 -5.02 16.74 16 18 H -0.27 -6.44 7.11 56.52 0.40 -6.04 16 19 H -0.29 -6.67 7.11 56.52 0.40 -6.27 16 20 H -0.27 -6.44 7.11 56.52 0.40 -6.04 16 21 C -0.23 -2.72 8.99 -39.68 -0.36 -3.07 16 22 C -0.02 -0.18 9.57 -39.32 -0.38 -0.56 16 23 H 0.09 0.41 8.09 -51.93 -0.42 -0.01 16 24 H 0.08 0.51 8.12 -51.93 -0.42 0.08 16 25 H 0.09 0.44 8.07 -51.93 -0.42 0.02 16 26 H 0.14 0.82 7.04 -52.48 -0.37 0.45 16 27 H 0.14 1.50 8.06 -52.49 -0.42 1.08 16 28 H 0.07 1.00 7.65 -51.93 -0.40 0.60 16 29 H 0.07 0.77 7.65 -51.93 -0.40 0.37 16 30 H 0.06 0.98 8.14 -51.93 -0.42 0.55 16 31 H 0.05 0.86 8.14 -51.93 -0.42 0.44 16 32 H 0.01 0.17 8.14 -51.93 -0.42 -0.25 16 33 H 0.01 0.20 8.14 -51.93 -0.42 -0.22 16 34 H 0.27 7.38 8.31 -40.82 -0.34 7.04 16 35 H 0.14 1.37 6.27 -52.49 -0.33 1.04 16 36 H 0.13 1.43 7.64 -52.48 -0.40 1.02 16 LS Contribution 317.54 15.07 4.79 4.79 Total: -1.00 -33.81 317.54 -6.94 -40.74 By element: Atomic # 1 Polarization: 0.22 SS G_CDS: -4.81 Total: -4.59 kcal Atomic # 6 Polarization: -8.67 SS G_CDS: -2.07 Total: -10.74 kcal Atomic # 7 Polarization: -26.72 SS G_CDS: 0.74 Total: -25.98 kcal Atomic # 8 Polarization: -20.40 SS G_CDS: -0.56 Total: -20.95 kcal Atomic # 14 Polarization: 21.76 SS G_CDS: -5.02 Total: 16.74 kcal Total LS contribution 4.79 Total: 4.79 kcal Total: -33.81 -6.94 -40.74 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000292744024.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.885 kcal (2) G-P(sol) polarization free energy of solvation -33.806 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -97.691 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.938 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.744 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.629 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds