Wall clock time and date at job start Mon Mar 30 2020 06:29:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50692 * 1 3 3 C 1.38149 * 120.04458 * 2 1 4 4 C 1.38362 * 120.07841 * 180.02562 * 3 2 1 5 5 Cl 1.73605 * 119.93945 * 179.97438 * 4 3 2 6 6 C 1.38420 * 120.12061 * 359.96194 * 4 3 2 7 7 C 1.38042 * 120.01794 * 0.03818 * 6 4 3 8 8 C 1.38817 * 120.05042 * 179.97438 * 2 1 3 9 9 N 1.39877 * 120.17407 * 0.02562 * 8 2 1 10 10 C 1.34561 * 120.44736 * 198.71871 * 9 8 2 11 11 O 1.21284 * 119.61238 * 180.57632 * 10 9 8 12 12 C 1.50503 * 120.77301 * 0.33634 * 10 9 8 13 13 H 1.08999 * 109.47656 * 204.97555 * 12 10 9 14 14 C 1.50701 * 109.12459 * 85.27559 * 12 10 9 15 15 H 1.07997 * 119.99975 * 239.57323 * 14 12 10 16 16 C 1.37872 * 119.99829 * 59.56959 * 14 12 10 17 17 N 1.31510 * 120.00659 * 0.02562 * 16 14 12 18 18 Si 1.86802 * 119.99806 * 179.97438 * 16 14 12 19 19 H 1.48496 * 109.47286 * 0.02562 * 18 16 14 20 20 H 1.48505 * 109.47102 * 120.00475 * 18 16 14 21 21 H 1.48502 * 109.47549 * 240.00438 * 18 16 14 22 22 C 1.50665 * 120.17430 * 179.97438 * 7 6 4 23 23 H 1.09002 * 109.47152 * 270.01542 * 1 2 3 24 24 H 1.09000 * 109.47587 * 30.01992 * 1 2 3 25 25 H 1.09004 * 109.47151 * 150.01638 * 1 2 3 26 26 H 1.07999 * 119.96089 * 359.97438 * 3 2 1 27 27 H 1.08004 * 119.99282 * 180.02562 * 6 4 3 28 28 H 0.97001 * 119.77355 * 18.43484 * 9 8 2 29 29 H 0.96998 * 120.00866 * 179.97438 * 17 16 14 30 30 H 1.08999 * 109.45910 * 266.10629 * 22 7 6 31 31 H 1.08995 * 109.46144 * 26.06962 * 22 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1986 1.1959 0.0000 4 6 3.5822 1.1967 -0.0005 5 17 4.4478 2.7016 -0.0012 6 6 4.2775 -0.0002 -0.0003 7 6 3.5909 -1.1977 -0.0003 8 6 2.2021 -1.2016 0.0005 9 7 1.5074 -2.4157 0.0005 10 6 2.1223 -3.5531 0.3733 11 8 1.5085 -4.5990 0.3576 12 6 3.5642 -3.5433 0.8044 13 1 3.9996 -4.5289 0.6395 14 6 3.6390 -3.2020 2.2704 15 1 4.1879 -2.3303 2.5946 16 6 3.0066 -4.0027 3.1976 17 7 2.3385 -5.0645 2.8030 18 14 3.0998 -3.5802 5.0148 19 1 3.9059 -2.3462 5.1954 20 1 1.7296 -3.3574 5.5422 21 1 3.7376 -4.7007 5.7516 22 6 4.3442 -2.5026 -0.0006 23 1 -0.3633 0.0003 1.0277 24 1 -0.3634 0.8898 -0.5141 25 1 -0.3634 -0.8902 -0.5136 26 1 1.6587 2.1312 -0.0004 27 1 5.3576 0.0028 -0.0003 28 1 0.5750 -2.4372 -0.2661 29 1 1.8938 -5.6281 3.4553 30 1 4.4651 -2.8518 -1.0260 31 1 5.3253 -2.3556 0.4509 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000011984375.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:29:57 Heat of formation + Delta-G solvation = -30.977622 kcal Electronic energy + Delta-G solvation = -17948.227185 eV Core-core repulsion = 15026.534668 eV Total energy + Delta-G solvation = -2921.692516 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -40.31525 -37.90841 -36.26245 -34.48713 -34.01371 -32.63691 -30.54371 -28.81023 -26.70307 -25.33852 -22.85837 -22.13108 -21.01522 -18.49912 -17.37877 -16.89345 -16.01059 -15.08115 -14.68473 -14.52731 -14.06762 -13.93372 -13.36444 -13.09094 -12.88327 -12.70264 -12.52629 -12.20095 -11.83359 -11.72565 -11.13476 -11.09524 -10.95588 -10.90742 -10.59368 -10.48683 -9.86151 -9.65507 -9.41824 -8.72416 -8.39922 -8.33478 -7.27987 -6.08801 -4.24539 1.54059 1.59310 2.43022 3.23004 3.31942 3.35726 3.70706 3.91997 4.26965 4.38744 4.95413 5.00789 5.18913 5.33218 5.50759 5.61242 5.68330 5.75689 5.88190 5.98758 6.14395 6.21676 6.34614 6.48445 6.55030 6.66216 6.76591 7.09073 7.29053 7.66307 7.75149 7.99711 8.17637 8.78561 9.36574 9.41405 10.91906 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.019800 B = 0.007335 C = 0.006539 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1413.831166 B = 3816.632699 C = 4280.650557 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.105 4.105 2 C -0.129 4.129 3 C -0.089 4.089 4 C -0.067 4.067 5 Cl -0.090 7.090 6 C -0.083 4.083 7 C -0.082 4.082 8 C 0.203 3.797 9 N -0.676 5.676 10 C 0.527 3.473 11 O -0.504 6.504 12 C 0.035 3.965 13 H 0.067 0.933 14 C -0.529 4.529 15 H 0.068 0.932 16 C 0.063 3.937 17 N -0.848 5.848 18 Si 0.891 3.109 19 H -0.270 1.270 20 H -0.284 1.284 21 H -0.281 1.281 22 C -0.072 4.072 23 H 0.071 0.929 24 H 0.067 0.933 25 H 0.061 0.939 26 H 0.128 0.872 27 H 0.132 0.868 28 H 0.390 0.610 29 H 0.263 0.737 30 H 0.061 0.939 31 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.382 11.828 -6.548 13.525 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.162 4.162 2 C -0.133 4.133 3 C -0.108 4.108 4 C -0.095 4.095 5 Cl -0.062 7.062 6 C -0.103 4.103 7 C -0.085 4.085 8 C 0.104 3.896 9 N -0.321 5.321 10 C 0.318 3.682 11 O -0.375 6.375 12 C 0.014 3.986 13 H 0.085 0.915 14 C -0.566 4.566 15 H 0.087 0.913 16 C -0.144 4.144 17 N -0.482 5.482 18 Si 0.718 3.282 19 H -0.194 1.194 20 H -0.210 1.210 21 H -0.207 1.207 22 C -0.109 4.109 23 H 0.090 0.910 24 H 0.086 0.914 25 H 0.080 0.920 26 H 0.146 0.854 27 H 0.149 0.851 28 H 0.228 0.772 29 H 0.073 0.927 30 H 0.080 0.920 31 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 0.168 11.022 -6.424 12.758 hybrid contribution -0.465 0.459 1.153 1.325 sum -0.297 11.480 -5.271 12.636 Atomic orbital electron populations 1.20620 0.90839 1.02226 1.02520 1.19356 0.95959 0.91123 1.06858 1.20500 0.91713 0.97485 1.01093 1.20573 0.92067 0.86246 1.10587 1.98321 1.77276 1.33169 1.97400 1.20648 0.99971 0.89587 1.00054 1.19526 0.91603 0.95698 1.01708 1.17522 0.91031 0.85539 0.95527 1.44163 1.14414 1.06822 1.66719 1.21961 0.92256 0.81113 0.72878 1.90629 1.67459 1.30315 1.49140 1.18934 0.86749 0.96613 0.96302 0.91472 1.20844 1.35312 1.12106 0.88378 0.91343 1.25180 0.94918 0.94930 0.99408 1.70174 1.30495 1.13605 1.33935 0.86532 0.77923 0.78653 0.85061 1.19406 1.21024 1.20689 1.20634 0.99296 0.91451 0.99516 0.91035 0.91404 0.92000 0.85432 0.85055 0.77220 0.92658 0.92034 0.90065 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.31 9.71 36.00 0.35 -0.96 16 2 C -0.13 -2.00 5.90 -104.44 -0.62 -2.61 16 3 C -0.09 -1.27 9.48 -39.57 -0.38 -1.64 16 4 C -0.07 -1.00 6.32 -39.47 -0.25 -1.25 16 5 Cl -0.09 -1.18 28.95 -51.86 -1.50 -2.69 16 6 C -0.08 -1.32 9.47 -39.59 -0.37 -1.69 16 7 C -0.08 -1.49 5.30 -104.47 -0.55 -2.04 16 8 C 0.20 3.72 6.47 -83.73 -0.54 3.18 16 9 N -0.68 -13.61 5.23 -10.00 -0.05 -13.66 16 10 C 0.53 12.88 6.31 -11.18 -0.07 12.81 16 11 O -0.50 -14.09 16.28 5.55 0.09 -14.00 16 12 C 0.04 0.84 2.47 -93.04 -0.23 0.62 16 13 H 0.07 1.74 8.14 -51.93 -0.42 1.32 16 14 C -0.53 -13.86 8.13 -34.44 -0.28 -14.14 16 15 H 0.07 1.77 7.74 -52.49 -0.41 1.36 16 16 C 0.06 1.71 5.29 -17.82 -0.09 1.62 16 17 N -0.85 -24.80 11.21 55.43 0.62 -24.18 16 18 Si 0.89 21.12 29.54 -169.99 -5.02 16.10 16 19 H -0.27 -6.26 7.11 56.52 0.40 -5.86 16 20 H -0.28 -6.79 7.11 56.52 0.40 -6.39 16 21 H -0.28 -6.59 7.11 56.52 0.40 -6.18 16 22 C -0.07 -1.36 5.39 -27.92 -0.15 -1.51 16 23 H 0.07 0.90 8.14 -51.93 -0.42 0.48 16 24 H 0.07 0.68 8.09 -51.93 -0.42 0.26 16 25 H 0.06 0.74 6.40 -51.93 -0.33 0.41 16 26 H 0.13 1.51 8.06 -52.49 -0.42 1.09 16 27 H 0.13 1.84 8.06 -52.48 -0.42 1.41 16 28 H 0.39 6.99 6.86 -40.82 -0.28 6.71 16 29 H 0.26 7.41 8.31 -40.82 -0.34 7.07 16 30 H 0.06 1.04 8.14 -51.93 -0.42 0.62 16 31 H 0.08 1.43 8.01 -51.93 -0.42 1.02 16 LS Contribution 278.69 15.07 4.20 4.20 Total: -1.00 -30.60 278.69 -7.95 -38.55 By element: Atomic # 1 Polarization: 6.41 SS G_CDS: -3.10 Total: 3.31 kcal Atomic # 6 Polarization: -4.43 SS G_CDS: -3.19 Total: -7.62 kcal Atomic # 7 Polarization: -38.41 SS G_CDS: 0.57 Total: -37.84 kcal Atomic # 8 Polarization: -14.09 SS G_CDS: 0.09 Total: -14.00 kcal Atomic # 14 Polarization: 21.12 SS G_CDS: -5.02 Total: 16.10 kcal Atomic # 17 Polarization: -1.18 SS G_CDS: -1.50 Total: -2.69 kcal Total LS contribution 4.20 Total: 4.20 kcal Total: -30.60 -7.95 -38.55 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000011984375.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.570 kcal (2) G-P(sol) polarization free energy of solvation -30.597 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.027 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.951 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.547 kcal (6) G-S(sol) free energy of system = (1) + (5) -30.978 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds