Wall clock time and date at job start Mon Mar 30 2020 06:29:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38135 * 120.04770 * 2 1 4 4 C 1.38357 * 120.08045 * 179.97438 * 3 2 1 5 5 Cl 1.73607 * 119.94067 * 180.02562 * 4 3 2 6 6 C 1.38420 * 120.12127 * 359.97438 * 4 3 2 7 7 C 1.38048 * 120.01564 * 0.02562 * 6 4 3 8 8 C 1.38821 * 120.04325 * 179.97438 * 2 1 3 9 9 N 1.39875 * 120.18420 * 359.97438 * 8 2 1 10 10 C 1.34563 * 120.44415 * 198.54995 * 9 8 2 11 11 O 1.21287 * 119.61134 * 180.79215 * 10 9 8 12 12 C 1.50456 * 120.77289 * 0.75698 * 10 9 8 13 13 H 1.09003 * 109.36563 * 84.98107 * 12 10 9 14 14 C 1.50697 * 109.39866 * 204.69500 * 12 10 9 15 15 H 1.07998 * 120.00216 * 120.47780 * 14 12 10 16 16 C 1.37877 * 120.00208 * 300.48713 * 14 12 10 17 17 N 1.31517 * 119.99877 * 359.97438 * 16 14 12 18 18 Si 1.86804 * 120.00165 * 180.02562 * 16 14 12 19 19 H 1.48500 * 109.46899 * 359.97438 * 18 16 14 20 20 H 1.48496 * 109.46792 * 119.99686 * 18 16 14 21 21 H 1.48502 * 109.46947 * 239.99544 * 18 16 14 22 22 C 1.50658 * 120.17861 * 179.97438 * 7 6 4 23 23 H 1.08994 * 109.47307 * 270.02271 * 1 2 3 24 24 H 1.08998 * 109.47174 * 30.02760 * 1 2 3 25 25 H 1.09008 * 109.47304 * 150.02078 * 1 2 3 26 26 H 1.08008 * 119.96079 * 359.95732 * 3 2 1 27 27 H 1.07997 * 119.99709 * 179.97438 * 6 4 3 28 28 H 0.96996 * 119.77552 * 18.53569 * 9 8 2 29 29 H 0.97000 * 120.00172 * 180.02562 * 17 16 14 30 30 H 1.09002 * 109.46400 * 266.04574 * 22 7 6 31 31 H 1.08994 * 109.46236 * 26.02350 * 22 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1987 1.1957 0.0000 4 6 3.5823 1.1965 0.0005 5 17 4.4479 2.7014 0.0012 6 6 4.2776 -0.0004 0.0016 7 6 3.5909 -1.1980 0.0016 8 6 2.2020 -1.2017 0.0005 9 7 1.5075 -2.4158 0.0016 10 6 2.1237 -3.5535 0.3712 11 8 1.5111 -4.6002 0.3527 12 6 3.5639 -3.5426 0.8063 13 1 3.6193 -3.2954 1.8665 14 6 4.1656 -4.9055 0.5798 15 1 5.0185 -5.0175 -0.0731 16 6 3.6272 -6.0096 1.2060 17 7 2.5887 -5.8732 2.0014 18 14 4.3735 -7.6990 0.9258 19 1 5.5252 -7.5832 -0.0045 20 1 4.8373 -8.2563 2.2217 21 1 3.3507 -8.6004 0.3369 22 6 4.3440 -2.5028 0.0022 23 1 -0.3633 0.0004 1.0276 24 1 -0.3633 0.8897 -0.5142 25 1 -0.3634 -0.8902 -0.5135 26 1 1.6588 2.1312 -0.0007 27 1 5.3576 0.0026 0.0016 28 1 0.5753 -2.4377 -0.2656 29 1 2.2101 -6.6498 2.4422 30 1 4.4645 -2.8530 -1.0230 31 1 5.3252 -2.3556 0.4534 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000011984376.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:29:59 Heat of formation + Delta-G solvation = -20.110713 kcal Electronic energy + Delta-G solvation = -17677.312693 eV Core-core repulsion = 14756.091402 eV Total energy + Delta-G solvation = -2921.221292 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -40.36141 -37.95142 -36.34830 -34.37884 -34.11520 -32.61851 -30.49358 -28.90398 -26.79879 -25.28268 -22.83837 -22.08857 -21.06219 -18.45559 -17.49182 -16.51654 -15.98113 -15.40545 -15.06821 -14.44790 -13.99200 -13.91764 -13.51566 -13.02596 -12.85952 -12.77608 -12.60009 -12.20050 -11.88261 -11.64878 -11.42653 -11.15275 -10.90246 -10.69402 -10.58246 -10.45763 -9.75565 -9.65872 -9.26419 -8.55708 -8.44764 -8.27738 -7.36665 -6.00836 -4.07810 1.41505 1.45830 2.33354 3.31635 3.39875 3.42432 3.62116 3.88554 4.23155 4.45428 4.85573 4.92033 5.23402 5.31429 5.41091 5.54441 5.62218 5.66120 5.86234 5.92243 6.12408 6.21203 6.31980 6.39363 6.47783 6.64924 6.69742 7.03298 7.34285 7.62766 7.86949 7.92289 8.30753 8.88128 9.45155 9.58894 11.07542 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.031446 B = 0.005581 C = 0.004858 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 890.194878 B = 5015.649226 C = 5762.134201 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.106 4.106 2 C -0.130 4.130 3 C -0.087 4.087 4 C -0.068 4.068 5 Cl -0.088 7.088 6 C -0.081 4.081 7 C -0.104 4.104 8 C 0.195 3.805 9 N -0.686 5.686 10 C 0.504 3.496 11 O -0.462 6.462 12 C 0.042 3.958 13 H 0.060 0.940 14 C -0.540 4.540 15 H 0.065 0.935 16 C 0.082 3.918 17 N -0.845 5.845 18 Si 0.896 3.104 19 H -0.272 1.272 20 H -0.284 1.284 21 H -0.284 1.284 22 C -0.069 4.069 23 H 0.071 0.929 24 H 0.068 0.932 25 H 0.062 0.938 26 H 0.129 0.871 27 H 0.133 0.867 28 H 0.388 0.612 29 H 0.259 0.741 30 H 0.075 0.925 31 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.648 14.292 -3.657 14.767 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C -0.134 4.134 3 C -0.106 4.106 4 C -0.096 4.096 5 Cl -0.059 7.059 6 C -0.101 4.101 7 C -0.107 4.107 8 C 0.095 3.905 9 N -0.333 5.333 10 C 0.292 3.708 11 O -0.328 6.328 12 C 0.021 3.979 13 H 0.077 0.923 14 C -0.577 4.577 15 H 0.083 0.917 16 C -0.126 4.126 17 N -0.478 5.478 18 Si 0.723 3.277 19 H -0.197 1.197 20 H -0.210 1.210 21 H -0.210 1.210 22 C -0.106 4.106 23 H 0.090 0.910 24 H 0.087 0.913 25 H 0.081 0.919 26 H 0.147 0.853 27 H 0.151 0.849 28 H 0.226 0.774 29 H 0.069 0.931 30 H 0.093 0.907 31 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -0.901 13.520 -3.456 13.983 hybrid contribution -0.128 -0.618 -0.181 0.656 sum -1.029 12.902 -3.636 13.444 Atomic orbital electron populations 1.20630 0.90712 1.02439 1.02478 1.19392 0.96044 0.91076 1.06875 1.20540 0.91726 0.97569 1.00759 1.20607 0.92106 0.86375 1.10530 1.98328 1.77215 1.33008 1.97375 1.20700 1.00110 0.89524 0.99741 1.19875 0.91804 0.96304 1.02714 1.17660 0.91093 0.85864 0.95909 1.44753 1.14468 1.06778 1.67271 1.22614 0.91572 0.81174 0.75399 1.90692 1.66201 1.29252 1.46695 1.18754 0.86687 0.95691 0.96792 0.92263 1.20688 1.16032 0.90045 1.30927 0.91708 1.24919 0.94061 0.99184 0.94443 1.70029 1.20429 1.30138 1.27221 0.86491 0.79042 0.84207 0.77926 1.19669 1.21018 1.21003 1.20603 0.98559 0.89696 1.01734 0.91048 0.91333 0.91871 0.85315 0.84880 0.77390 0.93097 0.90706 0.90448 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.19 9.72 36.01 0.35 -0.84 16 2 C -0.13 -1.84 5.90 -104.44 -0.62 -2.46 16 3 C -0.09 -1.13 9.48 -39.58 -0.38 -1.51 16 4 C -0.07 -0.94 6.32 -39.47 -0.25 -1.19 16 5 Cl -0.09 -1.07 28.95 -51.86 -1.50 -2.57 16 6 C -0.08 -1.20 9.47 -39.58 -0.37 -1.58 16 7 C -0.10 -1.78 5.66 -104.47 -0.59 -2.37 16 8 C 0.19 3.34 6.48 -83.73 -0.54 2.80 16 9 N -0.69 -13.25 5.23 -10.01 -0.05 -13.30 16 10 C 0.50 12.27 7.29 -11.20 -0.08 12.19 16 11 O -0.46 -13.11 14.05 5.55 0.08 -13.03 16 12 C 0.04 1.01 2.39 -93.12 -0.22 0.79 16 13 H 0.06 1.54 8.14 -51.93 -0.42 1.12 16 14 C -0.54 -14.54 8.39 -34.44 -0.29 -14.83 16 15 H 0.06 1.69 7.74 -52.49 -0.41 1.28 16 16 C 0.08 2.29 4.77 -17.82 -0.08 2.20 16 17 N -0.84 -24.89 10.76 55.43 0.60 -24.29 16 18 Si 0.90 21.52 29.54 -169.99 -5.02 16.50 16 19 H -0.27 -6.34 7.11 56.52 0.40 -5.94 16 20 H -0.28 -6.69 7.11 56.52 0.40 -6.29 16 21 H -0.28 -6.94 7.11 56.52 0.40 -6.54 16 22 C -0.07 -1.32 5.25 -27.98 -0.15 -1.47 16 23 H 0.07 0.78 8.14 -51.93 -0.42 0.36 16 24 H 0.07 0.62 8.09 -51.93 -0.42 0.20 16 25 H 0.06 0.70 6.40 -51.92 -0.33 0.37 16 26 H 0.13 1.38 8.06 -52.48 -0.42 0.96 16 27 H 0.13 1.73 8.06 -52.49 -0.42 1.31 16 28 H 0.39 6.68 6.86 -40.82 -0.28 6.40 16 29 H 0.26 7.34 8.31 -40.82 -0.34 7.00 16 30 H 0.07 1.44 8.09 -51.93 -0.42 1.02 16 31 H 0.08 1.35 8.06 -51.93 -0.42 0.94 16 LS Contribution 276.89 15.07 4.17 4.17 Total: -1.00 -30.56 276.89 -8.05 -38.61 By element: Atomic # 1 Polarization: 5.28 SS G_CDS: -3.10 Total: 2.17 kcal Atomic # 6 Polarization: -5.04 SS G_CDS: -3.22 Total: -8.26 kcal Atomic # 7 Polarization: -38.14 SS G_CDS: 0.54 Total: -37.59 kcal Atomic # 8 Polarization: -13.11 SS G_CDS: 0.08 Total: -13.03 kcal Atomic # 14 Polarization: 21.52 SS G_CDS: -5.02 Total: 16.50 kcal Atomic # 17 Polarization: -1.07 SS G_CDS: -1.50 Total: -2.57 kcal Total LS contribution 4.17 Total: 4.17 kcal Total: -30.56 -8.05 -38.61 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000011984376.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.500 kcal (2) G-P(sol) polarization free energy of solvation -30.556 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.056 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.055 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.611 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.111 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds