Wall clock time and date at job start Mon Mar 30 2020 06:28:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.38149 * 119.96142 * 2 1 4 4 C 1.38809 * 119.90805 * 179.97438 * 3 2 1 5 5 C 1.38904 * 119.90566 * 359.95064 * 4 3 2 6 6 C 1.38057 * 119.96171 * 0.07867 * 5 4 3 7 7 C 1.38355 * 119.96237 * 179.97438 * 2 1 3 8 8 Cl 1.73599 * 119.94015 * 0.05563 * 7 2 1 9 9 C 1.50659 * 119.84493 * 180.02562 * 5 4 3 10 10 C 1.52906 * 109.52638 * 326.07060 * 9 5 4 11 11 H 1.08996 * 109.39161 * 168.72388 * 10 9 5 12 12 C 1.50696 * 109.39598 * 288.54279 * 10 9 5 13 13 H 1.07996 * 120.00180 * 0.02562 * 12 10 9 14 14 C 1.37878 * 119.99796 * 179.97438 * 12 10 9 15 15 N 1.31513 * 119.99957 * 0.02562 * 14 12 10 16 16 Si 1.86803 * 120.00172 * 180.02562 * 14 12 10 17 17 H 1.48501 * 109.46919 * 59.99816 * 16 14 12 18 18 H 1.48498 * 109.47329 * 180.02562 * 16 14 12 19 19 H 1.48498 * 109.46806 * 300.00371 * 16 14 12 20 20 C 1.50489 * 109.91238 * 48.59415 * 10 9 5 21 21 O 1.21288 * 119.61660 * 144.82412 * 20 10 9 22 22 N 1.34566 * 120.77225 * 324.79139 * 20 10 9 23 23 H 1.09003 * 109.47065 * 89.99321 * 1 2 3 24 24 H 1.08996 * 109.46727 * 209.99572 * 1 2 3 25 25 H 1.08995 * 109.46897 * 329.99327 * 1 2 3 26 26 H 1.08003 * 120.04585 * 0.02562 * 3 2 1 27 27 H 1.07996 * 119.98155 * 179.97438 * 6 5 4 28 28 H 1.08991 * 109.45824 * 206.05292 * 9 5 4 29 29 H 1.09003 * 109.46096 * 86.09057 * 9 5 4 30 30 H 0.97005 * 119.99823 * 179.97438 * 15 14 12 31 31 H 0.97005 * 119.77582 * 180.82069 * 22 20 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1970 1.1969 0.0000 4 6 3.5851 1.1956 0.0005 5 6 4.2765 -0.0091 0.0021 6 6 3.5823 -1.2025 0.0015 7 6 2.1980 -1.1986 0.0005 8 17 1.3275 -2.7006 -0.0003 9 6 5.7831 -0.0090 0.0033 10 6 6.2946 1.1862 -0.8017 11 1 7.3657 1.3020 -0.6365 12 6 6.0370 0.9494 -2.2675 13 1 5.5563 0.0380 -2.5910 14 6 6.4141 1.8968 -3.1956 15 7 6.9990 3.0068 -2.8016 16 14 6.0942 1.6037 -5.0125 17 1 4.6355 1.4409 -5.2383 18 1 6.5905 2.7634 -5.7959 19 1 6.8027 0.3733 -5.4476 20 6 5.5835 2.4391 -0.3671 21 8 6.1835 3.4930 -0.3481 22 7 4.2894 2.4041 0.0003 23 1 -0.3633 0.0001 -1.0277 24 1 -0.3633 -0.8900 0.5138 25 1 -0.3633 0.8899 0.5139 26 1 1.6571 2.1323 0.0004 27 1 4.1196 -2.1394 0.0023 28 1 6.1466 -0.9325 -0.4470 29 1 6.1454 0.0620 1.0289 30 1 7.2646 3.6732 -3.4546 31 1 3.8418 3.2225 0.2666 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000011984420.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:28:41 Heat of formation + Delta-G solvation = -32.239299 kcal Electronic energy + Delta-G solvation = -17818.088641 eV Core-core repulsion = 14896.341414 eV Total energy + Delta-G solvation = -2921.747226 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -40.21641 -38.02659 -36.22933 -34.60806 -33.83081 -32.53937 -30.69031 -28.92832 -26.95735 -24.59265 -22.69393 -22.32189 -21.60813 -18.35903 -16.98505 -16.85095 -16.05876 -15.26248 -14.65699 -14.56118 -14.14913 -13.99770 -13.55727 -13.07661 -12.81134 -12.54757 -12.45511 -12.04879 -11.92770 -11.71629 -11.26008 -11.09375 -10.95254 -10.88709 -10.66024 -10.42657 -9.84884 -9.57983 -9.44187 -8.71925 -8.40741 -8.33960 -7.29375 -6.08406 -4.24317 1.54622 1.59812 2.44734 3.25860 3.31609 3.33332 3.70255 3.92146 4.27372 4.39056 4.94107 5.01089 5.18191 5.36100 5.49443 5.64899 5.69613 5.78052 5.85476 5.98070 6.17733 6.20000 6.30043 6.47953 6.55596 6.68571 6.77768 7.09766 7.29527 7.66807 7.75157 8.00318 8.17447 8.78286 9.36413 9.41558 10.92350 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.021799 B = 0.006858 C = 0.006222 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1284.167438 B = 4081.678633 C = 4499.000526 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 C -0.055 4.055 3 C -0.163 4.163 4 C 0.207 3.793 5 C -0.090 4.090 6 C -0.075 4.075 7 C -0.073 4.073 8 Cl -0.088 7.088 9 C -0.071 4.071 10 C 0.036 3.964 11 H 0.067 0.933 12 C -0.530 4.530 13 H 0.067 0.933 14 C 0.063 3.937 15 N -0.849 5.849 16 Si 0.892 3.108 17 H -0.276 1.276 18 H -0.286 1.286 19 H -0.273 1.273 20 C 0.527 3.473 21 O -0.504 6.504 22 N -0.677 5.677 23 H 0.072 0.928 24 H 0.070 0.930 25 H 0.066 0.934 26 H 0.128 0.872 27 H 0.132 0.868 28 H 0.080 0.920 29 H 0.061 0.939 30 H 0.265 0.735 31 H 0.391 0.609 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.626 -7.215 6.537 14.412 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.057 4.057 3 C -0.184 4.184 4 C 0.108 3.892 5 C -0.094 4.094 6 C -0.094 4.094 7 C -0.100 4.100 8 Cl -0.059 7.059 9 C -0.109 4.109 10 C 0.015 3.985 11 H 0.085 0.915 12 C -0.568 4.568 13 H 0.086 0.914 14 C -0.144 4.144 15 N -0.483 5.483 16 Si 0.719 3.281 17 H -0.201 1.201 18 H -0.212 1.212 19 H -0.198 1.198 20 C 0.318 3.682 21 O -0.376 6.376 22 N -0.321 5.321 23 H 0.090 0.910 24 H 0.089 0.911 25 H 0.085 0.915 26 H 0.146 0.854 27 H 0.150 0.850 28 H 0.099 0.901 29 H 0.079 0.921 30 H 0.075 0.925 31 H 0.227 0.773 Dipole moment (debyes) X Y Z Total from point charges -10.031 -6.626 6.410 13.624 hybrid contribution -0.601 0.236 -1.158 1.326 sum -10.632 -6.390 5.252 13.471 Atomic orbital electron populations 1.20806 0.90768 1.02878 1.02601 1.19324 0.96000 0.90858 0.99504 1.20466 0.91875 0.97589 1.08507 1.17689 0.90616 0.86396 0.94534 1.19533 0.96774 0.90585 1.02473 1.20646 0.91401 0.98075 0.99300 1.20469 0.91978 0.85758 1.11842 1.98305 1.77026 1.33227 1.97354 1.20617 0.89292 1.01481 0.99470 1.18906 0.96853 0.86493 0.96238 0.91500 1.20767 1.42373 1.05247 0.88394 0.91440 1.25181 0.94685 0.95124 0.99413 1.70157 1.36844 1.07092 1.34160 0.86640 0.78794 0.77882 0.84754 1.20132 1.21165 1.19820 1.21987 0.79750 0.93633 0.72864 1.90630 1.64969 1.32860 1.49105 1.44105 1.13239 1.07833 1.66907 0.90980 0.91084 0.91514 0.85420 0.85018 0.90118 0.92098 0.92533 0.77282 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.27 9.61 36.01 0.35 -0.93 16 2 C -0.06 -0.80 5.88 -104.61 -0.62 -1.41 16 3 C -0.16 -2.52 9.57 -39.40 -0.38 -2.90 16 4 C 0.21 3.79 6.49 -83.73 -0.54 3.24 16 5 C -0.09 -1.64 5.30 -104.46 -0.55 -2.19 16 6 C -0.07 -1.19 9.47 -39.58 -0.37 -1.56 16 7 C -0.07 -1.09 6.32 -39.47 -0.25 -1.34 16 8 Cl -0.09 -1.14 27.28 -51.86 -1.41 -2.56 16 9 C -0.07 -1.35 5.38 -27.95 -0.15 -1.50 16 10 C 0.04 0.87 2.46 -93.08 -0.23 0.64 16 11 H 0.07 1.74 8.14 -51.93 -0.42 1.31 16 12 C -0.53 -13.94 8.13 -34.44 -0.28 -14.22 16 13 H 0.07 1.74 7.74 -52.49 -0.41 1.33 16 14 C 0.06 1.73 5.30 -17.82 -0.09 1.64 16 15 N -0.85 -24.88 11.23 55.43 0.62 -24.26 16 16 Si 0.89 21.16 29.54 -169.99 -5.02 16.14 16 17 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 18 H -0.29 -6.78 7.11 56.52 0.40 -6.38 16 19 H -0.27 -6.31 7.11 56.52 0.40 -5.91 16 20 C 0.53 12.90 6.31 -11.18 -0.07 12.83 16 21 O -0.50 -14.13 16.31 5.55 0.09 -14.04 16 22 N -0.68 -13.63 5.36 -10.00 -0.05 -13.68 16 23 H 0.07 0.77 8.14 -51.93 -0.42 0.35 16 24 H 0.07 0.75 6.89 -51.93 -0.36 0.39 16 25 H 0.07 0.64 8.08 -51.93 -0.42 0.22 16 26 H 0.13 1.68 8.06 -52.48 -0.42 1.26 16 27 H 0.13 1.84 8.06 -52.49 -0.42 1.42 16 28 H 0.08 1.43 8.01 -51.93 -0.42 1.01 16 29 H 0.06 1.03 8.14 -51.93 -0.42 0.61 16 30 H 0.26 7.49 8.31 -40.82 -0.34 7.15 16 31 H 0.39 6.92 8.83 -40.82 -0.36 6.56 16 LS Contribution 279.67 15.07 4.21 4.21 Total: -1.00 -30.71 279.67 -7.96 -38.67 By element: Atomic # 1 Polarization: 6.41 SS G_CDS: -3.21 Total: 3.20 kcal Atomic # 6 Polarization: -4.50 SS G_CDS: -3.19 Total: -7.69 kcal Atomic # 7 Polarization: -38.52 SS G_CDS: 0.57 Total: -37.95 kcal Atomic # 8 Polarization: -14.13 SS G_CDS: 0.09 Total: -14.04 kcal Atomic # 14 Polarization: 21.16 SS G_CDS: -5.02 Total: 16.14 kcal Atomic # 17 Polarization: -1.14 SS G_CDS: -1.41 Total: -2.56 kcal Total LS contribution 4.21 Total: 4.21 kcal Total: -30.71 -7.96 -38.67 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000011984420.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.433 kcal (2) G-P(sol) polarization free energy of solvation -30.711 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -24.277 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.962 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.673 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.239 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds