Wall clock time and date at job start Mon Mar 30 2020 06:40:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53008 * 1 3 3 C 1.50697 * 109.47167 * 2 1 4 4 N 1.30104 * 124.96114 * 90.01668 * 3 2 1 5 5 C 1.35675 * 109.50719 * 180.02562 * 4 3 2 6 6 C 1.39841 * 133.86143 * 180.02562 * 5 4 3 7 7 C 1.38263 * 118.14585 * 179.97438 * 6 5 4 8 8 Cl 1.73603 * 120.23262 * 180.02562 * 7 6 5 9 9 C 1.38722 * 119.53144 * 0.02562 * 7 6 5 10 10 N 1.31686 * 121.34208 * 359.97438 * 9 7 6 11 11 C 1.32341 * 121.59005 * 0.02562 * 10 9 7 12 12 N 1.36117 * 124.95418 * 270.02583 * 3 2 1 13 13 C 1.46500 * 126.27741 * 0.02562 * 12 3 2 14 14 C 1.50700 * 109.47081 * 269.95603 * 13 12 3 15 15 H 1.07994 * 120.00312 * 0.02562 * 14 13 12 16 16 C 1.37884 * 119.99659 * 179.97438 * 14 13 12 17 17 N 1.31514 * 120.00117 * 359.97438 * 16 14 13 18 18 Si 1.86801 * 119.99733 * 179.97438 * 16 14 13 19 19 H 1.48503 * 109.47164 * 90.00204 * 18 16 14 20 20 H 1.48494 * 109.46805 * 209.99911 * 18 16 14 21 21 H 1.48497 * 109.47170 * 330.00247 * 18 16 14 22 22 H 1.08995 * 109.46966 * 180.02562 * 1 2 3 23 23 H 1.08998 * 109.47391 * 300.00478 * 1 2 3 24 24 H 1.08997 * 109.46565 * 60.00576 * 1 2 3 25 25 H 1.08998 * 109.47391 * 239.99522 * 2 1 3 26 26 H 1.08997 * 109.46565 * 119.99424 * 2 1 3 27 27 H 1.07996 * 120.92390 * 359.95240 * 6 5 4 28 28 H 1.07998 * 119.32765 * 180.02562 * 9 7 6 29 29 H 1.09000 * 109.46934 * 29.95741 * 13 12 3 30 30 H 1.09000 * 109.46900 * 149.95542 * 13 12 3 31 31 H 0.96994 * 119.99750 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0324 1.4208 0.0000 4 7 2.2812 2.1236 1.0663 5 6 2.7165 3.3567 0.7047 6 6 3.1178 4.4904 1.4184 7 6 3.5117 5.6059 0.7027 8 17 4.0208 7.0426 1.5337 9 6 3.4972 5.5690 -0.6839 10 7 3.1155 4.4907 -1.3364 11 6 2.7290 3.3962 -0.7008 12 7 2.2919 2.1562 -1.1156 13 6 2.1337 1.7122 -2.5027 14 6 3.4192 1.0868 -2.9797 15 1 4.2688 1.0258 -2.3159 16 6 3.5101 0.5916 -4.2633 17 7 2.4749 0.6645 -5.0712 18 14 5.1037 -0.1830 -4.8548 19 1 5.0859 -1.6384 -4.5605 20 1 5.2412 0.0243 -6.3188 21 1 6.2509 0.4494 -4.1554 22 1 -0.3633 -1.0276 0.0005 23 1 -0.3634 0.5139 0.8899 24 1 -0.3632 0.5137 -0.8900 25 1 1.8935 -0.5139 -0.8899 26 1 1.8933 -0.5137 0.8900 27 1 3.1195 4.4945 2.4983 28 1 3.8059 6.4420 -1.2396 29 1 1.3296 0.9785 -2.5599 30 1 1.8903 2.5678 -3.1326 31 1 2.5391 0.3165 -5.9743 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000057792710.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:40:08 Heat of formation + Delta-G solvation = 61.857337 kcal Electronic energy + Delta-G solvation = -17403.822700 eV Core-core repulsion = 14518.448561 eV Total energy + Delta-G solvation = -2885.374139 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.068 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -41.89976 -38.28448 -36.33638 -34.39662 -33.19751 -32.66608 -31.08298 -28.76393 -27.42385 -24.59162 -23.62908 -22.39501 -21.83581 -19.43594 -17.62563 -17.03731 -16.65721 -16.03255 -15.19516 -14.85365 -14.34077 -13.96562 -13.53625 -13.18032 -13.14728 -12.77128 -12.56030 -12.11028 -11.89886 -11.46440 -11.31230 -11.27197 -11.10869 -10.96026 -10.84397 -10.53959 -10.46146 -10.15248 -9.55384 -8.85874 -8.70800 -8.08803 -7.98410 -6.36379 -4.44781 1.08689 1.47084 2.16217 3.07771 3.14907 3.21685 3.23024 3.28763 4.08107 4.20913 4.40213 4.73879 4.94059 4.98804 5.07697 5.23641 5.41035 5.48485 5.55885 5.83602 5.98809 6.07823 6.11233 6.30078 6.33887 6.39347 6.79482 6.86877 7.20886 7.48030 7.64146 7.74872 8.20911 8.26351 8.59733 9.22715 10.71803 Molecular weight = 265.07amu Principal moments of inertia in cm(-1) A = 0.018616 B = 0.006241 C = 0.005048 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1503.731958 B = 4485.310925 C = 5544.923010 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.048 4.048 3 C 0.310 3.690 4 N -0.508 5.508 5 C 0.008 3.992 6 C -0.020 4.020 7 C -0.108 4.108 8 Cl -0.067 7.067 9 C 0.135 3.865 10 N -0.446 5.446 11 C 0.246 3.754 12 N -0.442 5.442 13 C 0.237 3.763 14 C -0.542 4.542 15 H 0.063 0.937 16 C 0.070 3.930 17 N -0.887 5.887 18 Si 0.906 3.094 19 H -0.276 1.276 20 H -0.282 1.282 21 H -0.272 1.272 22 H 0.067 0.933 23 H 0.058 0.942 24 H 0.058 0.942 25 H 0.101 0.899 26 H 0.095 0.905 27 H 0.143 0.857 28 H 0.166 0.834 29 H 0.055 0.945 30 H 0.055 0.945 31 H 0.269 0.731 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.313 4.425 9.717 10.757 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C -0.087 4.087 3 C 0.044 3.956 4 N -0.229 5.229 5 C -0.116 4.116 6 C -0.048 4.048 7 C -0.140 4.140 8 Cl -0.039 7.039 9 C -0.036 4.036 10 N -0.157 5.157 11 C 0.008 3.992 12 N -0.127 5.127 13 C 0.119 3.881 14 C -0.580 4.580 15 H 0.081 0.919 16 C -0.134 4.134 17 N -0.524 5.524 18 Si 0.732 3.268 19 H -0.202 1.202 20 H -0.207 1.207 21 H -0.197 1.197 22 H 0.086 0.914 23 H 0.077 0.923 24 H 0.077 0.923 25 H 0.119 0.881 26 H 0.114 0.886 27 H 0.161 0.839 28 H 0.183 0.817 29 H 0.072 0.928 30 H 0.073 0.927 31 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges -1.495 4.065 9.297 10.257 hybrid contribution 1.070 0.085 -0.398 1.145 sum -0.425 4.150 8.899 9.828 Atomic orbital electron populations 1.21710 0.93737 1.02364 1.02428 1.20204 0.96488 0.86777 1.05265 1.23606 0.95774 0.95724 0.80525 1.70376 1.22206 1.02500 1.27795 1.19564 1.05857 0.94513 0.91625 1.20334 0.95709 0.88665 1.00138 1.21505 1.08925 0.89864 0.93664 1.98336 1.89789 1.37188 1.78582 1.22433 0.96738 0.95360 0.89031 1.66518 1.11648 0.97828 1.39738 1.19069 1.01096 0.88533 0.90524 1.45948 1.48339 1.07915 1.10529 1.19880 0.99047 0.97160 0.71973 1.21205 0.97685 1.40381 0.98731 0.91923 1.24901 0.97229 0.95344 0.95943 1.69909 1.29863 1.45058 1.07587 0.86360 0.82834 0.79486 0.78096 1.20175 1.20722 1.19683 0.91419 0.92281 0.92335 0.88059 0.88639 0.83900 0.81653 0.92757 0.92687 0.92107 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.92 9.90 37.16 0.37 -1.55 16 2 C -0.05 -0.76 6.00 -27.88 -0.17 -0.92 16 3 C 0.31 6.11 7.11 -154.76 -1.10 5.01 16 4 N -0.51 -10.13 11.28 -8.19 -0.09 -10.22 16 5 C 0.01 0.16 7.24 -84.67 -0.61 -0.45 16 6 C -0.02 -0.34 10.01 -38.97 -0.39 -0.73 16 7 C -0.11 -1.64 6.33 -39.39 -0.25 -1.89 16 8 Cl -0.07 -0.83 28.98 -51.86 -1.50 -2.34 16 9 C 0.14 2.24 10.96 -17.44 -0.19 2.05 16 10 N -0.45 -9.35 10.38 -12.24 -0.13 -9.48 16 11 C 0.25 5.39 8.01 -155.60 -1.25 4.15 16 12 N -0.44 -9.82 2.78 -114.25 -0.32 -10.14 16 13 C 0.24 5.78 5.49 -5.19 -0.03 5.75 16 14 C -0.54 -14.34 9.39 -34.44 -0.32 -14.67 16 15 H 0.06 1.72 7.81 -52.49 -0.41 1.31 16 16 C 0.07 1.85 5.46 -17.82 -0.10 1.75 16 17 N -0.89 -24.19 13.29 55.43 0.74 -23.46 16 18 Si 0.91 20.58 29.54 -169.99 -5.02 15.56 16 19 H -0.28 -6.10 7.11 56.52 0.40 -5.70 16 20 H -0.28 -6.33 7.11 56.52 0.40 -5.93 16 21 H -0.27 -6.27 7.11 56.52 0.40 -5.87 16 22 H 0.07 0.74 8.14 -51.93 -0.42 0.31 16 23 H 0.06 0.76 8.14 -51.93 -0.42 0.34 16 24 H 0.06 0.85 8.14 -51.93 -0.42 0.43 16 25 H 0.10 1.68 7.65 -51.93 -0.40 1.28 16 26 H 0.10 1.29 8.14 -51.93 -0.42 0.87 16 27 H 0.14 2.00 8.06 -52.49 -0.42 1.58 16 28 H 0.17 2.20 8.06 -52.49 -0.42 1.78 16 29 H 0.05 1.30 7.61 -51.93 -0.40 0.90 16 30 H 0.06 1.46 8.14 -51.93 -0.42 1.04 16 31 H 0.27 6.94 8.31 -40.82 -0.34 6.60 16 LS Contribution 291.66 15.07 4.40 4.40 Total: -1.00 -28.99 291.66 -9.26 -38.26 By element: Atomic # 1 Polarization: 2.23 SS G_CDS: -3.30 Total: -1.07 kcal Atomic # 6 Polarization: 2.53 SS G_CDS: -4.04 Total: -1.51 kcal Atomic # 7 Polarization: -53.50 SS G_CDS: 0.20 Total: -53.30 kcal Atomic # 14 Polarization: 20.58 SS G_CDS: -5.02 Total: 15.56 kcal Atomic # 17 Polarization: -0.83 SS G_CDS: -1.50 Total: -2.34 kcal Total LS contribution 4.40 Total: 4.40 kcal Total: -28.99 -9.26 -38.26 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000057792710.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 100.113 kcal (2) G-P(sol) polarization free energy of solvation -28.991 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 71.122 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.265 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.256 kcal (6) G-S(sol) free energy of system = (1) + (5) 61.857 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds