Wall clock time and date at job start Mon Mar 30 2020 06:29:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35992 * 117.00133 * 2 1 4 4 C 1.38340 * 119.93450 * 0.02562 * 3 2 1 5 5 C 1.39187 * 119.66103 * 179.97438 * 4 3 2 6 6 C 1.40345 * 120.22303 * 0.02603 * 5 4 3 7 7 C 1.39078 * 119.40777 * 359.97438 * 6 5 4 8 8 C 1.37956 * 120.03690 * 359.97438 * 7 6 5 9 9 Cl 1.73601 * 119.72909 * 179.97438 * 8 7 6 10 10 N 1.38318 * 107.86942 * 180.02562 * 6 5 4 11 11 H 0.97006 * 124.69567 * 180.02562 * 10 6 5 12 12 C 1.35610 * 110.60018 * 0.02562 * 10 6 5 13 13 C 1.50699 * 125.35274 * 179.97438 * 12 10 6 14 14 C 1.38910 * 109.29801 * 0.25905 * 12 10 6 15 15 C 1.40881 * 126.91879 * 179.73717 * 14 12 10 16 16 H 1.07994 * 120.00274 * 30.74880 * 15 14 12 17 17 C 1.39732 * 119.99678 * 210.74282 * 15 14 12 18 18 N 1.31057 * 120.00339 * 19.45592 * 17 15 14 19 19 Si 1.86799 * 119.99561 * 199.45639 * 17 15 14 20 20 H 1.48496 * 109.47661 * 0.02562 * 19 17 15 21 21 H 1.48500 * 109.46982 * 120.00346 * 19 17 15 22 22 H 1.48508 * 109.47164 * 239.99826 * 19 17 15 23 23 H 1.08993 * 109.47123 * 299.99708 * 1 2 3 24 24 H 1.09002 * 109.46808 * 60.00449 * 1 2 3 25 25 H 1.09005 * 109.46810 * 179.97438 * 1 2 3 26 26 H 1.08000 * 120.17245 * 359.95775 * 4 3 2 27 27 H 1.07998 * 119.98450 * 180.02562 * 7 6 5 28 28 H 1.09007 * 109.47056 * 95.08329 * 13 12 10 29 29 H 1.08996 * 109.47257 * 335.08507 * 13 12 10 30 30 H 1.08998 * 109.47149 * 215.08207 * 13 12 10 31 31 H 0.96994 * 120.00451 * 174.49105 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 1.2917 2.3711 0.0005 5 6 1.9295 3.6082 0.0011 6 6 3.3311 3.6804 0.0005 7 6 4.0754 2.5055 0.0000 8 6 3.4361 1.2830 0.0005 9 17 4.3731 -0.1784 -0.0008 10 7 3.6873 5.0169 0.0018 11 1 4.6001 5.3451 0.0014 12 6 2.5835 5.8048 0.0038 13 6 2.5880 7.3118 0.0061 14 6 1.4482 5.0045 0.0097 15 6 0.1076 5.4375 0.0185 16 1 -0.1621 6.3689 -0.4568 17 6 -0.8730 4.6617 0.6422 18 7 -0.5293 3.7585 1.5275 19 14 -2.6740 4.9119 0.2140 20 1 -2.7960 5.9836 -0.8066 21 1 -3.2345 3.6477 -0.3270 22 1 -3.4234 5.3030 1.4351 23 1 -0.3633 0.5138 0.8899 24 1 -0.3633 0.5138 -0.8901 25 1 -0.3633 -1.0277 -0.0005 26 1 0.2131 2.3166 0.0003 27 1 5.1545 2.5502 0.0000 28 1 2.4973 7.6770 -1.0169 29 1 3.5213 7.6717 0.4390 30 1 1.7485 7.6766 0.5979 31 1 -1.2126 3.2759 2.0185 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000082606169.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:29:12 Heat of formation + Delta-G solvation = 1.312582 kcal Electronic energy + Delta-G solvation = -17799.771760 eV Core-core repulsion = 14879.479452 eV Total energy + Delta-G solvation = -2920.292308 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -39.98669 -38.29517 -36.02510 -34.58428 -33.70076 -30.55459 -29.75208 -28.29878 -27.38858 -25.64967 -24.31028 -21.15018 -20.61916 -19.17674 -17.44623 -16.71025 -15.79117 -15.17909 -15.01869 -14.87731 -14.30076 -13.51192 -13.31974 -13.29961 -12.69409 -12.36646 -12.22847 -11.79203 -11.59944 -11.43061 -11.27699 -11.11019 -10.79962 -10.78143 -10.74375 -10.29450 -10.18366 -9.53032 -9.35737 -9.04196 -8.33421 -6.77095 -6.67225 -6.40940 -4.06941 1.97354 2.54083 2.86507 2.99592 3.13007 3.18145 3.86349 4.01712 4.04283 4.40961 4.74047 5.31601 5.58167 5.72709 5.78054 5.92126 6.02857 6.12288 6.20025 6.29472 6.44989 6.50481 6.63485 6.70433 6.87714 7.15919 7.24812 7.46622 7.53104 7.81672 8.20466 8.24678 8.56813 8.71634 9.03585 9.04634 10.39296 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.017835 B = 0.008750 C = 0.006025 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1569.552070 B = 3199.207161 C = 4646.413954 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.319 6.319 3 C 0.051 3.949 4 C -0.085 4.085 5 C -0.063 4.063 6 C 0.079 3.921 7 C -0.124 4.124 8 C -0.039 4.039 9 Cl -0.090 7.090 10 N -0.587 5.587 11 H 0.393 0.607 12 C -0.109 4.109 13 C -0.047 4.047 14 C 0.067 3.933 15 C -0.455 4.455 16 H 0.077 0.923 17 C 0.078 3.922 18 N -0.810 5.810 19 Si 0.895 3.105 20 H -0.263 1.263 21 H -0.275 1.275 22 H -0.278 1.278 23 H 0.055 0.945 24 H 0.047 0.953 25 H 0.087 0.913 26 H 0.138 0.862 27 H 0.118 0.882 28 H 0.044 0.956 29 H 0.038 0.962 30 H 0.068 0.932 31 H 0.274 0.726 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.013 -2.247 -2.024 4.269 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 O -0.233 6.233 3 C 0.005 3.995 4 C -0.105 4.105 5 C -0.070 4.070 6 C -0.030 4.030 7 C -0.146 4.146 8 C -0.066 4.066 9 Cl -0.062 7.062 10 N -0.192 5.192 11 H 0.227 0.773 12 C -0.213 4.213 13 C -0.105 4.105 14 C 0.061 3.939 15 C -0.488 4.488 16 H 0.095 0.905 17 C -0.136 4.136 18 N -0.438 5.438 19 Si 0.721 3.279 20 H -0.187 1.187 21 H -0.200 1.200 22 H -0.203 1.203 23 H 0.074 0.926 24 H 0.066 0.934 25 H 0.106 0.894 26 H 0.156 0.844 27 H 0.136 0.864 28 H 0.062 0.938 29 H 0.057 0.943 30 H 0.087 0.913 31 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 3.135 -2.644 -1.916 4.527 hybrid contribution -0.560 0.189 0.013 0.591 sum 2.575 -2.456 -1.903 4.035 Atomic orbital electron populations 1.22879 0.79570 1.02311 1.01533 1.85995 1.20256 1.26668 1.90379 1.18219 0.89818 0.84822 1.06675 1.20697 0.99947 0.89388 1.00445 1.19118 0.90506 0.94233 1.03115 1.17881 0.94288 0.84230 1.06606 1.19256 0.98052 0.88186 1.09117 1.19330 0.88011 0.86242 1.13058 1.98277 1.73149 1.37279 1.97496 1.40826 1.07068 1.03025 1.68259 0.77276 1.20302 0.85347 0.91828 1.23823 1.19812 1.00640 0.89760 1.00244 1.17762 0.91784 0.87163 0.97182 1.18554 0.90296 1.06338 1.33571 0.90497 1.25693 1.00522 0.93688 0.93732 1.69960 1.35144 1.20944 1.17795 0.86467 0.82969 0.79171 0.79300 1.18651 1.20042 1.20327 0.92605 0.93412 0.89444 0.84424 0.86413 0.93777 0.94301 0.91299 0.91529 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.54 9.81 101.05 0.99 1.53 16 2 O -0.32 -6.40 9.94 -19.72 -0.20 -6.60 16 3 C 0.05 1.12 6.68 -39.20 -0.26 0.86 16 4 C -0.09 -2.03 7.72 -39.19 -0.30 -2.33 16 5 C -0.06 -1.56 5.78 -104.89 -0.61 -2.17 16 6 C 0.08 1.77 7.23 -83.83 -0.61 1.17 16 7 C -0.12 -2.50 9.83 -39.37 -0.39 -2.89 16 8 C -0.04 -0.80 6.33 -39.35 -0.25 -1.05 16 9 Cl -0.09 -1.63 28.46 -51.86 -1.48 -3.11 16 10 N -0.59 -12.00 6.00 -6.12 -0.04 -12.04 16 11 H 0.39 6.51 8.96 -40.82 -0.37 6.14 16 12 C -0.11 -2.45 7.23 -80.67 -0.58 -3.03 16 13 C -0.05 -0.86 10.17 36.00 0.37 -0.49 16 14 C 0.07 1.71 5.72 -104.79 -0.60 1.11 16 15 C -0.46 -11.64 8.93 -38.02 -0.34 -11.98 16 16 H 0.08 1.90 7.91 -52.49 -0.42 1.49 16 17 C 0.08 1.92 4.88 -17.32 -0.08 1.83 16 18 N -0.81 -20.44 10.30 55.54 0.57 -19.87 16 19 Si 0.90 18.44 29.61 -169.99 -5.03 13.40 16 20 H -0.26 -5.38 7.11 56.52 0.40 -4.98 16 21 H -0.28 -5.58 7.11 56.52 0.40 -5.17 16 22 H -0.28 -5.67 7.11 56.52 0.40 -5.27 16 23 H 0.06 0.97 7.66 -51.93 -0.40 0.57 16 24 H 0.05 0.78 7.66 -51.93 -0.40 0.38 16 25 H 0.09 1.15 8.14 -51.93 -0.42 0.72 16 26 H 0.14 3.29 4.55 -52.49 -0.24 3.06 16 27 H 0.12 2.03 8.06 -52.49 -0.42 1.61 16 28 H 0.04 0.75 8.14 -51.93 -0.42 0.33 16 29 H 0.04 0.60 8.14 -51.93 -0.42 0.18 16 30 H 0.07 1.29 8.02 -51.93 -0.42 0.88 16 31 H 0.27 6.39 8.31 -40.82 -0.34 6.05 16 LS Contribution 281.49 15.07 4.24 4.24 Total: -1.00 -27.78 281.49 -7.65 -35.43 By element: Atomic # 1 Polarization: 9.04 SS G_CDS: -3.06 Total: 5.98 kcal Atomic # 6 Polarization: -14.77 SS G_CDS: -2.66 Total: -17.44 kcal Atomic # 7 Polarization: -32.44 SS G_CDS: 0.54 Total: -31.91 kcal Atomic # 8 Polarization: -6.40 SS G_CDS: -0.20 Total: -6.60 kcal Atomic # 14 Polarization: 18.44 SS G_CDS: -5.03 Total: 13.40 kcal Atomic # 17 Polarization: -1.63 SS G_CDS: -1.48 Total: -3.11 kcal Total LS contribution 4.24 Total: 4.24 kcal Total: -27.78 -7.65 -35.43 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000082606169.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.740 kcal (2) G-P(sol) polarization free energy of solvation -27.780 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.959 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.647 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.427 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.313 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds