Wall clock time and date at job start Mon Mar 30 2020 06:29:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.38175 * 120.04869 * 2 1 4 4 Cl 1.73605 * 119.67354 * 0.02562 * 3 2 1 5 5 C 1.38838 * 120.65641 * 180.02562 * 3 2 1 6 6 C 1.37800 * 120.38142 * 0.05367 * 5 3 2 7 7 C 1.39681 * 119.62724 * 359.97438 * 6 5 3 8 8 C 1.38897 * 120.05110 * 180.02562 * 2 1 3 9 9 N 1.38453 * 120.52664 * 359.79600 * 8 2 1 10 10 C 1.36745 * 120.04156 * 341.23995 * 9 8 2 11 11 H 1.07999 * 119.99759 * 322.24667 * 10 9 8 12 12 C 1.38907 * 120.00419 * 141.96663 * 10 9 8 13 13 N 1.31502 * 119.99631 * 351.43615 * 12 10 9 14 14 Si 1.86793 * 120.00389 * 171.43794 * 12 10 9 15 15 H 1.48502 * 109.47222 * 59.99863 * 14 12 10 16 16 H 1.48503 * 109.47250 * 180.02562 * 14 12 10 17 17 H 1.48503 * 109.47135 * 300.00113 * 14 12 10 18 18 C 1.46777 * 119.92201 * 161.51444 * 9 8 2 19 19 C 1.53154 * 109.05958 * 47.96371 * 18 9 8 20 20 C 1.46959 * 120.83257 * 179.85405 * 7 6 5 21 21 O 1.21333 * 121.26060 * 345.65871 * 20 7 6 22 22 H 1.08995 * 109.46649 * 262.90685 * 1 2 3 23 23 H 1.08991 * 109.47216 * 22.91052 * 1 2 3 24 24 H 1.09003 * 109.46854 * 142.91122 * 1 2 3 25 25 H 1.07996 * 119.81120 * 180.02562 * 5 3 2 26 26 H 1.07997 * 120.19262 * 179.97438 * 6 5 3 27 27 H 0.97001 * 120.00032 * 179.97438 * 13 12 10 28 28 H 1.08997 * 109.57764 * 167.84845 * 18 9 8 29 29 H 1.09007 * 109.57591 * 288.23462 * 18 9 8 30 30 H 1.08998 * 109.86289 * 183.46846 * 19 18 9 31 31 H 1.09001 * 109.69473 * 62.69132 * 19 18 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1989 1.1960 0.0000 4 17 1.3236 2.6953 0.0007 5 6 3.5872 1.2108 -0.0005 6 6 4.2967 0.0295 -0.0022 7 6 3.6114 -1.1877 -0.0028 8 6 2.2026 -1.2023 -0.0005 9 7 1.5225 -2.4082 0.0032 10 6 0.2111 -2.4534 0.3880 11 1 -0.1352 -1.8310 1.1998 12 6 -0.6771 -3.2954 -0.2691 13 7 -0.3025 -3.9211 -1.3634 14 14 -2.4033 -3.5389 0.4016 15 1 -3.1086 -2.2326 0.4392 16 1 -3.1471 -4.4786 -0.4754 17 1 -2.3265 -4.0996 1.7745 18 6 2.2124 -3.6392 -0.4007 19 6 3.5592 -3.7184 0.3242 20 6 4.3414 -2.4631 -0.0078 21 8 5.5255 -2.5099 -0.2683 22 1 -0.3632 -0.1269 1.0198 23 1 -0.3633 0.9465 -0.4000 24 1 -0.3633 -0.8198 -0.6198 25 1 4.1142 2.1535 -0.0001 26 1 5.3766 0.0445 -0.0030 27 1 -0.9225 -4.5094 -1.8221 28 1 1.6038 -4.5032 -0.1342 29 1 2.3810 -3.6269 -1.4776 30 1 4.1099 -4.5967 -0.0125 31 1 3.3945 -3.7762 1.4002 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000084042317.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:29:49 Heat of formation + Delta-G solvation = -9.113917 kcal Electronic energy + Delta-G solvation = -18111.260249 eV Core-core repulsion = 15190.515814 eV Total energy + Delta-G solvation = -2920.744435 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -39.87694 -37.71925 -36.58867 -35.45376 -33.00325 -32.11933 -30.00496 -29.05074 -26.78735 -24.54784 -23.03991 -22.49500 -20.44277 -18.36167 -17.82134 -16.46188 -15.52420 -15.45075 -14.99467 -14.28400 -13.99355 -13.87586 -13.59108 -13.21849 -12.74898 -12.54517 -12.17287 -11.85335 -11.64702 -11.56265 -11.35128 -11.25192 -11.01579 -10.75879 -10.59500 -10.49043 -10.40258 -10.02237 -9.23717 -8.88201 -8.82009 -7.92422 -6.91202 -6.61268 -4.16068 1.42384 2.32253 2.73966 2.99963 3.03653 3.04088 3.06571 3.80073 4.39671 4.52557 4.75559 4.88268 5.56303 5.61176 5.72180 5.80814 5.82626 6.04011 6.22423 6.41987 6.45296 6.47601 6.55515 6.64867 6.82943 6.93548 7.07097 7.10056 7.19375 7.32316 7.41802 7.81319 8.23474 8.33550 8.83514 9.22003 10.29725 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.015593 B = 0.010059 C = 0.006343 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1795.232887 B = 2782.863169 C = 4413.562819 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.103 4.103 2 C -0.147 4.147 3 C 0.034 3.966 4 Cl -0.094 7.094 5 C -0.236 4.236 6 C 0.003 3.997 7 C -0.301 4.301 8 C 0.259 3.741 9 N -0.418 5.418 10 C -0.314 4.314 11 H 0.104 0.896 12 C 0.035 3.965 13 N -0.858 5.858 14 Si 0.923 3.077 15 H -0.266 1.266 16 H -0.280 1.280 17 H -0.269 1.269 18 C 0.145 3.855 19 C -0.188 4.188 20 C 0.409 3.591 21 O -0.496 6.496 22 H 0.058 0.942 23 H 0.043 0.957 24 H 0.101 0.899 25 H 0.116 0.884 26 H 0.121 0.879 27 H 0.277 0.723 28 H 0.098 0.902 29 H 0.063 0.937 30 H 0.090 0.910 31 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.357 3.224 2.594 4.153 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.160 4.160 2 C -0.152 4.152 3 C 0.006 3.994 4 Cl -0.066 7.066 5 C -0.258 4.258 6 C -0.016 4.016 7 C -0.310 4.310 8 C 0.136 3.864 9 N -0.100 5.100 10 C -0.442 4.442 11 H 0.121 0.879 12 C -0.172 4.172 13 N -0.491 5.491 14 Si 0.748 3.252 15 H -0.191 1.191 16 H -0.206 1.206 17 H -0.194 1.194 18 C 0.022 3.978 19 C -0.227 4.227 20 C 0.292 3.708 21 O -0.376 6.376 22 H 0.076 0.924 23 H 0.062 0.938 24 H 0.120 0.880 25 H 0.134 0.866 26 H 0.139 0.861 27 H 0.087 0.913 28 H 0.116 0.884 29 H 0.081 0.919 30 H 0.109 0.891 31 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 0.584 2.824 2.285 3.679 hybrid contribution -0.977 -0.002 0.224 1.002 sum -0.392 2.822 2.509 3.796 Atomic orbital electron populations 1.21154 0.90360 1.02275 1.02177 1.19076 0.96707 0.89535 1.09909 1.20643 0.91642 0.84924 1.02222 1.98291 1.77363 1.34053 1.96863 1.20218 0.91316 0.97952 1.16324 1.20651 0.98622 0.90452 0.91888 1.19525 0.92111 0.94662 1.24660 1.17817 0.89447 0.86489 0.92664 1.42497 1.09564 1.01858 1.56121 1.19782 0.83554 1.25917 1.14945 0.87852 1.25596 1.00238 0.96958 0.94438 1.69922 1.37264 1.26944 1.14951 0.86019 0.81087 0.79081 0.78995 1.19055 1.20551 1.19440 1.21371 0.89422 0.89150 0.97898 1.22734 0.98845 0.97879 1.03233 1.22212 0.87238 0.89974 0.71379 1.90433 1.17643 1.89203 1.40318 0.92376 0.93845 0.88035 0.86608 0.86093 0.91263 0.88407 0.91924 0.89125 0.88774 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -2.05 7.85 36.01 0.28 -1.76 16 2 C -0.15 -3.06 5.86 -104.40 -0.61 -3.67 16 3 C 0.03 0.65 6.32 -39.38 -0.25 0.40 16 4 Cl -0.09 -1.57 27.12 -51.86 -1.41 -2.98 16 5 C -0.24 -4.32 9.80 -39.52 -0.39 -4.71 16 6 C 0.00 0.06 9.64 -39.20 -0.38 -0.32 16 7 C -0.30 -6.33 5.85 -104.83 -0.61 -6.94 16 8 C 0.26 5.64 6.32 -83.63 -0.53 5.11 16 9 N -0.42 -9.26 2.88 -112.59 -0.32 -9.59 16 10 C -0.31 -7.03 5.86 -15.11 -0.09 -7.11 16 11 H 0.10 2.27 5.65 -52.49 -0.30 1.97 16 12 C 0.04 0.79 4.74 -17.45 -0.08 0.70 16 13 N -0.86 -20.11 11.56 55.50 0.64 -19.47 16 14 Si 0.92 17.59 29.56 -169.99 -5.03 12.56 16 15 H -0.27 -5.02 7.11 56.52 0.40 -4.62 16 16 H -0.28 -5.41 7.11 56.52 0.40 -5.01 16 17 H -0.27 -5.10 7.11 56.52 0.40 -4.70 16 18 C 0.14 2.98 4.94 -3.81 -0.02 2.96 16 19 C -0.19 -3.43 6.35 -27.37 -0.17 -3.60 16 20 C 0.41 8.41 6.90 -30.34 -0.21 8.21 16 21 O -0.50 -10.96 17.40 5.51 0.10 -10.86 16 22 H 0.06 1.10 6.76 -51.93 -0.35 0.75 16 23 H 0.04 0.79 6.59 -51.93 -0.34 0.45 16 24 H 0.10 2.22 5.52 -51.93 -0.29 1.94 16 25 H 0.12 1.85 8.06 -52.49 -0.42 1.43 16 26 H 0.12 2.15 7.82 -52.49 -0.41 1.74 16 27 H 0.28 6.21 8.31 -40.82 -0.34 5.88 16 28 H 0.10 2.06 6.84 -51.93 -0.36 1.70 16 29 H 0.06 1.37 8.14 -51.92 -0.42 0.95 16 30 H 0.09 1.47 8.14 -51.93 -0.42 1.05 16 31 H 0.09 1.62 8.14 -51.93 -0.42 1.20 16 LS Contribution 270.26 15.07 4.07 4.07 Total: -1.00 -24.42 270.26 -7.87 -32.29 By element: Atomic # 1 Polarization: 7.58 SS G_CDS: -2.87 Total: 4.71 kcal Atomic # 6 Polarization: -7.68 SS G_CDS: -3.06 Total: -10.74 kcal Atomic # 7 Polarization: -29.38 SS G_CDS: 0.32 Total: -29.06 kcal Atomic # 8 Polarization: -10.96 SS G_CDS: 0.10 Total: -10.86 kcal Atomic # 14 Polarization: 17.59 SS G_CDS: -5.03 Total: 12.56 kcal Atomic # 17 Polarization: -1.57 SS G_CDS: -1.41 Total: -2.98 kcal Total LS contribution 4.07 Total: 4.07 kcal Total: -24.42 -7.87 -32.29 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000084042317.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.178 kcal (2) G-P(sol) polarization free energy of solvation -24.418 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.240 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.873 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.292 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.114 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds