Wall clock time and date at job start Mon Mar 30 2020 06:32:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.35013 * 120.00157 * 2 1 4 4 C 1.47100 * 120.00302 * 190.57179 * 3 2 1 5 5 C 1.39908 * 120.15892 * 223.88502 * 4 3 2 6 6 C 1.37819 * 119.83197 * 179.97438 * 5 4 3 7 7 C 1.38552 * 120.16570 * 359.97438 * 6 5 4 8 8 Cl 1.73601 * 119.83801 * 179.97438 * 7 6 5 9 9 C 1.38556 * 120.32494 * 0.25156 * 7 6 5 10 10 C 1.37831 * 120.15712 * 359.49333 * 9 7 6 11 11 C 1.46199 * 119.99973 * 180.02562 * 2 1 3 12 12 O 1.21766 * 119.99550 * 187.32608 * 11 2 1 13 13 N 1.34777 * 119.99813 * 7.32539 * 11 2 1 14 14 C 1.36722 * 119.99688 * 179.97438 * 13 11 2 15 15 H 1.08001 * 120.00242 * 0.02562 * 14 13 11 16 16 C 1.39116 * 119.99936 * 180.02562 * 14 13 11 17 17 N 1.31328 * 120.00138 * 180.02562 * 16 14 13 18 18 Si 1.86803 * 119.99901 * 0.02562 * 16 14 13 19 19 H 1.48498 * 109.46985 * 90.00331 * 18 16 14 20 20 H 1.48500 * 109.46910 * 210.00134 * 18 16 14 21 21 H 1.48497 * 109.47064 * 330.00137 * 18 16 14 22 22 H 1.08996 * 109.47655 * 89.99962 * 1 2 3 23 23 H 1.09007 * 109.46966 * 209.99886 * 1 2 3 24 24 H 1.08998 * 109.46778 * 329.99310 * 1 2 3 25 25 H 1.08000 * 120.00039 * 10.56771 * 3 2 1 26 26 H 1.07997 * 120.07690 * 359.95277 * 5 4 3 27 27 H 1.08006 * 119.91807 * 180.02562 * 6 5 4 28 28 H 1.08003 * 119.92029 * 179.71883 * 9 7 6 29 29 H 1.08002 * 120.07767 * 180.24898 * 10 9 7 30 30 H 0.96996 * 120.00328 * 0.02562 * 13 11 2 31 31 H 0.97001 * 120.00283 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1821 1.1692 0.0000 4 6 3.6344 1.1801 -0.2337 5 6 4.4679 1.9765 0.5589 6 6 5.8277 1.9811 0.3344 7 6 6.3697 1.1993 -0.6729 8 17 8.0836 1.2121 -0.9487 9 6 5.5499 0.4116 -1.4649 10 6 4.1888 0.3928 -1.2486 11 6 2.2380 -1.2661 -0.0006 12 8 3.4482 -1.2704 0.1339 13 7 1.5723 -2.4285 -0.1499 14 6 2.2560 -3.6125 -0.1510 15 1 3.3294 -3.6164 -0.0317 16 6 1.5690 -4.8122 -0.3056 17 7 2.2256 -5.9496 -0.3062 18 14 -0.2875 -4.8055 -0.5126 19 1 -0.6243 -4.7136 -1.9560 20 1 -0.8527 -6.0587 0.0487 21 1 -0.8613 -3.6388 0.2049 22 1 -0.3634 0.0000 -1.0276 23 1 -0.3633 -0.8901 0.5139 24 1 -0.3633 0.8899 0.5139 25 1 1.6559 2.0966 0.1715 26 1 4.0468 2.5863 1.3445 27 1 6.4725 2.5951 0.9458 28 1 5.9789 -0.1918 -2.2512 29 1 3.5514 -0.2247 -1.8642 30 1 0.6083 -2.4250 -0.2574 31 1 1.7466 -6.7861 -0.4144 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000123097435.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:32:26 Heat of formation + Delta-G solvation = 3.147185 kcal Electronic energy + Delta-G solvation = -17228.752691 eV Core-core repulsion = 14308.539938 eV Total energy + Delta-G solvation = -2920.212753 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -39.40761 -38.08876 -36.17111 -34.44701 -33.81829 -31.96141 -30.65725 -30.31060 -26.25769 -25.43787 -22.67714 -22.02240 -20.87384 -19.08992 -17.72035 -16.85764 -15.81001 -15.21862 -14.98773 -14.46691 -13.99287 -13.77118 -13.44292 -13.13445 -12.97561 -12.91010 -12.63651 -12.33083 -12.18140 -11.96896 -11.37137 -11.26004 -11.09550 -10.90037 -10.70518 -10.46861 -10.11985 -9.74141 -9.18139 -8.72337 -8.44245 -8.20472 -7.42657 -6.51756 -3.92601 1.09048 1.83982 2.22354 2.46740 2.92683 2.97099 3.04438 3.94197 4.12665 4.17510 4.62438 5.04422 5.16263 5.20221 5.27179 5.43659 5.49331 5.70449 5.77070 5.82782 5.87417 6.06225 6.13771 6.36492 6.48405 6.66217 6.71073 6.82704 7.07488 7.26294 7.41696 8.02647 8.44252 8.79797 9.26116 9.75841 10.59853 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.024596 B = 0.005415 C = 0.004583 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1138.134713 B = 5169.263083 C = 6108.137870 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.120 4.120 2 C -0.138 4.138 3 C -0.092 4.092 4 C -0.037 4.037 5 C -0.101 4.101 6 C -0.130 4.130 7 C -0.030 4.030 8 Cl -0.092 7.092 9 C -0.124 4.124 10 C -0.013 4.013 11 C 0.458 3.542 12 O -0.566 6.566 13 N -0.566 5.566 14 C -0.297 4.297 15 H 0.124 0.876 16 C 0.043 3.957 17 N -0.863 5.863 18 Si 0.878 3.122 19 H -0.267 1.267 20 H -0.273 1.273 21 H -0.267 1.267 22 H 0.073 0.927 23 H 0.063 0.937 24 H 0.068 0.932 25 H 0.125 0.875 26 H 0.123 0.877 27 H 0.123 0.877 28 H 0.125 0.875 29 H 0.123 0.877 30 H 0.372 0.628 31 H 0.278 0.722 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.520 14.318 -1.256 14.453 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C -0.141 4.141 3 C -0.113 4.113 4 C -0.037 4.037 5 C -0.119 4.119 6 C -0.149 4.149 7 C -0.057 4.057 8 Cl -0.063 7.063 9 C -0.143 4.143 10 C -0.032 4.032 11 C 0.248 3.752 12 O -0.451 6.451 13 N -0.201 5.201 14 C -0.426 4.426 15 H 0.142 0.858 16 C -0.163 4.163 17 N -0.501 5.501 18 Si 0.704 3.296 19 H -0.192 1.192 20 H -0.198 1.198 21 H -0.192 1.192 22 H 0.091 0.909 23 H 0.082 0.918 24 H 0.086 0.914 25 H 0.143 0.857 26 H 0.141 0.859 27 H 0.141 0.859 28 H 0.143 0.857 29 H 0.141 0.859 30 H 0.206 0.794 31 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -0.586 13.980 -1.204 14.044 hybrid contribution -1.340 -0.446 -0.005 1.412 sum -1.926 13.534 -1.209 13.724 Atomic orbital electron populations 1.20855 0.91829 1.02741 1.02302 1.22077 0.95483 0.94362 1.02223 1.21797 0.92282 0.96482 1.00729 1.18837 0.93028 0.96230 0.95608 1.21023 0.92439 0.99421 0.99037 1.20671 0.95296 1.00802 0.98146 1.20889 0.83463 1.01701 0.99608 1.98325 1.14075 1.97929 1.96017 1.20791 0.93409 0.99621 1.00494 1.21057 0.93862 0.92692 0.95555 1.17559 0.87859 0.83264 0.86528 1.90752 1.13132 1.86016 1.55239 1.42338 1.08639 1.06713 1.62432 1.19563 0.95952 0.81240 1.45862 0.85823 1.25165 0.98851 0.94989 0.97272 1.69585 1.36494 0.97774 1.46262 0.86682 0.84768 0.78808 0.79370 1.19211 1.19778 1.19247 0.90865 0.91790 0.91354 0.85706 0.85876 0.85885 0.85704 0.85868 0.79427 0.91169 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.59 9.46 36.01 0.34 -1.25 16 2 C -0.14 -2.36 5.88 -102.57 -0.60 -2.96 16 3 C -0.09 -1.41 9.43 -37.13 -0.35 -1.76 16 4 C -0.04 -0.63 4.54 -105.05 -0.48 -1.11 16 5 C -0.10 -1.54 9.80 -39.11 -0.38 -1.93 16 6 C -0.13 -1.98 9.81 -39.62 -0.39 -2.37 16 7 C -0.03 -0.49 6.33 -39.35 -0.25 -0.74 16 8 Cl -0.09 -1.35 28.95 -51.86 -1.50 -2.85 16 9 C -0.12 -2.18 9.81 -39.61 -0.39 -2.57 16 10 C -0.01 -0.24 6.59 -39.11 -0.26 -0.50 16 11 C 0.46 10.23 6.69 -13.06 -0.09 10.14 16 12 O -0.57 -14.43 11.71 5.13 0.06 -14.37 16 13 N -0.57 -13.14 5.00 -12.32 -0.06 -13.20 16 14 C -0.30 -8.10 10.16 -15.05 -0.15 -8.25 16 15 H 0.12 3.87 7.38 -52.49 -0.39 3.48 16 16 C 0.04 1.12 5.50 -17.44 -0.10 1.03 16 17 N -0.86 -24.25 13.95 55.50 0.77 -23.47 16 18 Si 0.88 18.53 27.74 -169.99 -4.72 13.81 16 19 H -0.27 -5.49 7.11 56.52 0.40 -5.09 16 20 H -0.27 -5.76 7.11 56.52 0.40 -5.36 16 21 H -0.27 -5.13 6.52 56.52 0.37 -4.76 16 22 H 0.07 0.85 8.14 -51.93 -0.42 0.43 16 23 H 0.06 0.88 7.00 -51.92 -0.36 0.52 16 24 H 0.07 0.72 8.07 -51.93 -0.42 0.30 16 25 H 0.13 1.46 8.05 -52.49 -0.42 1.04 16 26 H 0.12 1.53 8.06 -52.49 -0.42 1.11 16 27 H 0.12 1.57 8.06 -52.48 -0.42 1.15 16 28 H 0.12 2.05 8.06 -52.48 -0.42 1.63 16 29 H 0.12 2.38 7.01 -52.49 -0.37 2.01 16 30 H 0.37 7.63 4.03 -40.82 -0.16 7.46 16 31 H 0.28 7.16 8.31 -40.82 -0.34 6.82 16 LS Contribution 284.24 15.07 4.28 4.28 Total: -1.00 -30.09 284.24 -7.24 -37.33 By element: Atomic # 1 Polarization: 13.71 SS G_CDS: -2.98 Total: 10.73 kcal Atomic # 6 Polarization: -9.17 SS G_CDS: -3.09 Total: -12.26 kcal Atomic # 7 Polarization: -37.39 SS G_CDS: 0.71 Total: -36.67 kcal Atomic # 8 Polarization: -14.43 SS G_CDS: 0.06 Total: -14.37 kcal Atomic # 14 Polarization: 18.53 SS G_CDS: -4.72 Total: 13.81 kcal Atomic # 17 Polarization: -1.35 SS G_CDS: -1.50 Total: -2.85 kcal Total LS contribution 4.28 Total: 4.28 kcal Total: -30.09 -7.24 -37.33 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000123097435.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.475 kcal (2) G-P(sol) polarization free energy of solvation -30.092 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.384 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.237 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.328 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.147 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds