Wall clock time and date at job start Mon Mar 30 2020 06:39:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.38016 * 119.99899 * 2 1 4 4 C 1.38905 * 120.02937 * 180.02562 * 3 2 1 5 5 N 1.39843 * 119.99180 * 179.97438 * 4 3 2 6 6 C 1.39107 * 120.02109 * 359.97438 * 4 3 2 7 7 Cl 1.73602 * 120.00002 * 179.97438 * 6 4 3 8 8 C 1.38020 * 119.99528 * 359.70492 * 6 4 3 9 9 C 1.39075 * 119.99952 * 180.02562 * 2 1 3 10 10 N 1.39397 * 120.01002 * 359.97438 * 9 2 1 11 11 C 1.36834 * 119.99621 * 90.27600 * 10 9 2 12 12 H 1.08003 * 120.00171 * 187.33525 * 11 10 9 13 13 C 1.38738 * 119.99882 * 7.34510 * 11 10 9 14 14 N 1.31627 * 120.00074 * 13.30795 * 13 11 10 15 15 Si 1.86803 * 119.99735 * 193.31083 * 13 11 10 16 16 H 1.48491 * 109.47338 * 0.02562 * 15 13 11 17 17 H 1.48506 * 109.46914 * 120.00048 * 15 13 11 18 18 H 1.48497 * 109.47085 * 239.99515 * 15 13 11 19 19 C 1.46500 * 120.00731 * 270.00507 * 10 9 2 20 20 C 1.47206 * 109.46836 * 95.67990 * 19 10 9 21 21 N 4.14455 * 47.32265 * 141.45029 * 2 1 3 22 22 H 1.08999 * 109.47292 * 269.97688 * 1 2 3 23 23 H 1.09004 * 109.47249 * 29.98083 * 1 2 3 24 24 H 1.09010 * 109.47076 * 149.98255 * 1 2 3 25 25 H 1.08001 * 119.98399 * 359.97438 * 3 2 1 26 26 H 0.97010 * 119.99978 * 359.97438 * 5 4 3 27 27 H 0.97000 * 120.00403 * 179.97438 * 5 4 3 28 28 H 1.08001 * 120.01477 * 180.27715 * 8 6 4 29 29 H 0.97002 * 119.99952 * 179.97438 * 14 13 11 30 30 H 1.08994 * 109.47582 * 215.68464 * 19 10 9 31 31 H 1.09001 * 109.46469 * 335.68597 * 19 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1970 1.1953 0.0000 4 6 3.5860 1.1960 -0.0005 5 7 4.2844 2.4075 -0.0011 6 6 4.2827 -0.0081 -0.0005 7 17 6.0187 -0.0065 -0.0019 8 6 3.5936 -1.2039 0.0062 9 6 2.2023 -1.2044 -0.0005 10 7 1.5055 -2.4118 -0.0005 11 6 1.1681 -3.0068 -1.1856 12 1 0.5281 -3.8769 -1.1900 13 6 1.6482 -2.4927 -2.3814 14 7 2.6242 -1.6097 -2.3735 15 14 0.9092 -3.0537 -4.0028 16 1 -0.1660 -4.0436 -3.7406 17 1 0.3403 -1.8836 -4.7187 18 1 1.9657 -3.6792 -4.8381 19 6 1.1397 -3.0466 1.2681 20 6 -0.2385 -2.6718 1.6248 21 7 -1.3025 -2.3830 1.8989 22 1 -0.3634 -0.0004 1.0276 23 1 -0.3634 0.8902 -0.5135 24 1 -0.3634 -0.8899 -0.5141 25 1 1.6567 2.1304 -0.0004 26 1 3.7988 3.2473 -0.0015 27 1 5.2544 2.4083 -0.0011 28 1 4.1341 -2.1389 0.0107 29 1 2.9601 -1.2505 -3.2096 30 1 1.2067 -4.1295 1.1652 31 1 1.8210 -2.7131 2.0509 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000125809865.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:39:53 Heat of formation + Delta-G solvation = 72.849340 kcal Electronic energy + Delta-G solvation = -18005.589632 eV Core-core repulsion = 15120.692142 eV Total energy + Delta-G solvation = -2884.897490 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.068 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -38.90731 -36.67222 -35.58152 -35.04278 -33.09574 -31.52913 -31.11516 -27.91449 -26.69728 -25.80748 -23.13636 -21.35656 -20.08801 -17.67614 -17.03986 -16.34369 -15.91250 -15.32418 -14.50490 -13.95697 -13.75121 -13.58091 -12.95943 -12.87105 -12.66376 -12.31166 -12.17700 -12.00506 -11.71494 -11.26231 -11.00072 -10.87682 -10.75566 -10.69887 -10.49079 -10.35721 -10.08557 -9.93527 -9.28228 -9.04463 -7.61534 -7.36321 -6.68030 -5.63207 -3.43419 2.36474 2.64047 3.04694 3.30416 3.37801 3.40961 3.49223 3.54663 4.38102 4.48910 4.80308 4.87593 5.24265 5.38085 5.72637 5.95962 6.06934 6.17614 6.20788 6.39005 6.42932 6.70278 6.80895 6.97293 7.05868 7.28351 7.57946 7.64812 7.92864 8.01837 8.20833 8.32799 8.33346 9.09929 9.58344 9.95586 11.10549 Molecular weight = 265.07amu Principal moments of inertia in cm(-1) A = 0.016031 B = 0.009157 C = 0.007346 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1746.215860 B = 3057.197409 C = 3810.645501 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.100 4.100 2 C -0.053 4.053 3 C -0.192 4.192 4 C 0.199 3.801 5 N -0.888 5.888 6 C -0.106 4.106 7 Cl -0.112 7.112 8 C -0.007 4.007 9 C 0.227 3.773 10 N -0.544 5.544 11 C -0.281 4.281 12 H 0.084 0.916 13 C 0.017 3.983 14 N -0.876 5.876 15 Si 0.904 3.096 16 H -0.278 1.278 17 H -0.289 1.289 18 H -0.289 1.289 19 C 0.232 3.768 20 C 0.202 3.798 21 N -0.475 5.475 22 H 0.049 0.951 23 H 0.045 0.955 24 H 0.079 0.921 25 H 0.106 0.894 26 H 0.390 0.610 27 H 0.392 0.608 28 H 0.116 0.884 29 H 0.257 0.743 30 H 0.099 0.901 31 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.331 3.518 5.324 7.712 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C -0.056 4.056 3 C -0.216 4.216 4 C 0.096 3.904 5 N -0.430 5.430 6 C -0.137 4.137 7 Cl -0.084 7.084 8 C -0.029 4.029 9 C 0.131 3.869 10 N -0.260 5.260 11 C -0.408 4.408 12 H 0.102 0.898 13 C -0.183 4.183 14 N -0.518 5.518 15 Si 0.733 3.267 16 H -0.203 1.203 17 H -0.215 1.215 18 H -0.216 1.216 19 C 0.101 3.899 20 C -0.118 4.118 21 N -0.154 5.154 22 H 0.068 0.932 23 H 0.064 0.936 24 H 0.097 0.903 25 H 0.124 0.876 26 H 0.217 0.783 27 H 0.220 0.780 28 H 0.134 0.866 29 H 0.069 0.931 30 H 0.117 0.883 31 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 2.967 3.910 5.524 7.389 hybrid contribution 0.403 0.146 -1.491 1.552 sum 3.370 4.055 4.032 6.638 Atomic orbital electron populations 1.20618 0.92367 1.02367 1.00359 1.20006 0.95253 0.92606 0.97774 1.19894 0.90747 0.97295 1.13640 1.17179 0.90789 0.84763 0.97646 1.42346 1.08461 1.04756 1.87428 1.19958 0.81366 0.93810 1.18574 1.98251 1.13560 1.98687 1.97874 1.20841 0.93996 0.94722 0.93305 1.16261 0.88393 0.84866 0.97370 1.41248 1.62879 1.20931 1.00928 1.19230 1.27207 1.12027 0.82316 0.89775 1.24824 0.97059 0.98492 0.97967 1.70012 1.24748 1.31297 1.25707 0.86212 0.78675 0.77941 0.83883 1.20283 1.21511 1.21561 1.18571 0.83238 0.98902 0.89198 1.31601 0.96597 0.92166 0.91440 1.80997 1.13509 1.10325 1.10578 0.93198 0.93644 0.90254 0.87568 0.78334 0.78002 0.86599 0.93113 0.88328 0.88995 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -2.02 8.64 36.00 0.31 -1.71 16 2 C -0.05 -1.11 5.87 -104.40 -0.61 -1.72 16 3 C -0.19 -3.69 9.54 -39.42 -0.38 -4.06 16 4 C 0.20 3.67 6.76 -83.63 -0.57 3.11 16 5 N -0.89 -13.03 9.05 32.48 0.29 -12.74 16 6 C -0.11 -2.06 6.33 -39.34 -0.25 -2.31 16 7 Cl -0.11 -1.90 27.58 -51.86 -1.43 -3.34 16 8 C -0.01 -0.14 7.91 -39.33 -0.31 -0.46 16 9 C 0.23 4.85 2.94 -83.78 -0.25 4.61 16 10 N -0.54 -11.45 1.66 -116.23 -0.19 -11.64 16 11 C -0.28 -6.65 9.10 -15.13 -0.14 -6.79 16 12 H 0.08 1.96 7.86 -52.48 -0.41 1.55 16 13 C 0.02 0.43 5.33 -17.45 -0.09 0.33 16 14 N -0.88 -22.57 9.61 55.49 0.53 -22.03 16 15 Si 0.90 20.51 29.57 -169.99 -5.03 15.48 16 16 H -0.28 -6.22 7.11 56.52 0.40 -5.82 16 17 H -0.29 -6.79 7.11 56.52 0.40 -6.39 16 18 H -0.29 -6.65 7.11 56.52 0.40 -6.25 16 19 C 0.23 3.83 6.15 -6.83 -0.04 3.79 16 20 C 0.20 3.68 13.82 -20.75 -0.29 3.39 16 21 N -0.47 -9.45 18.40 42.16 0.78 -8.67 16 22 H 0.05 0.97 7.57 -51.93 -0.39 0.57 16 23 H 0.04 0.85 8.08 -51.93 -0.42 0.43 16 24 H 0.08 1.80 6.63 -51.92 -0.34 1.45 16 25 H 0.11 1.82 8.06 -52.49 -0.42 1.40 16 26 H 0.39 4.78 8.84 -40.82 -0.36 4.42 16 27 H 0.39 5.37 7.50 -40.82 -0.31 5.07 16 28 H 0.12 2.47 8.06 -52.49 -0.42 2.05 16 29 H 0.26 6.74 8.31 -40.82 -0.34 6.40 16 30 H 0.10 1.42 8.08 -51.93 -0.42 1.00 16 31 H 0.09 1.28 8.00 -51.93 -0.42 0.87 16 LS Contribution 286.57 15.07 4.32 4.32 Total: -1.00 -27.30 286.57 -6.39 -33.69 By element: Atomic # 1 Polarization: 9.80 SS G_CDS: -3.05 Total: 6.75 kcal Atomic # 6 Polarization: 0.79 SS G_CDS: -2.61 Total: -1.82 kcal Atomic # 7 Polarization: -56.49 SS G_CDS: 1.41 Total: -55.08 kcal Atomic # 14 Polarization: 20.51 SS G_CDS: -5.03 Total: 15.48 kcal Atomic # 17 Polarization: -1.90 SS G_CDS: -1.43 Total: -3.34 kcal Total LS contribution 4.32 Total: 4.32 kcal Total: -27.30 -6.39 -33.69 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000125809865.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 106.537 kcal (2) G-P(sol) polarization free energy of solvation -27.299 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 79.239 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.389 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.688 kcal (6) G-S(sol) free energy of system = (1) + (5) 72.849 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds