Wall clock time and date at job start Mon Mar 30 2020 06:25:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13603 * 1 3 3 C 1.43194 * 179.97438 * 2 1 4 4 C 1.39840 * 120.20087 * 224.42021 * 3 2 1 5 5 Cl 1.73602 * 120.06725 * 0.02562 * 4 3 2 6 6 C 1.37992 * 119.86738 * 180.02562 * 4 3 2 7 7 C 1.38454 * 120.27967 * 0.02562 * 6 4 3 8 8 C 1.38132 * 120.41532 * 0.02562 * 7 6 4 9 9 C 1.38625 * 120.12365 * 359.97438 * 8 7 6 10 10 O 1.35706 * 120.14086 * 179.72977 * 9 8 7 11 11 C 1.42908 * 117.00043 * 359.97438 * 10 9 8 12 12 C 1.53002 * 109.46932 * 180.02562 * 11 10 9 13 13 C 1.53003 * 109.46583 * 180.02562 * 12 11 10 14 14 C 1.50702 * 109.46546 * 180.02562 * 13 12 11 15 15 H 1.08002 * 120.00319 * 359.97438 * 14 13 12 16 16 C 1.37885 * 119.99571 * 179.97438 * 14 13 12 17 17 N 1.31512 * 120.00057 * 359.97438 * 16 14 13 18 18 Si 1.86801 * 119.99612 * 179.97438 * 16 14 13 19 19 H 1.48498 * 109.47248 * 59.99952 * 18 16 14 20 20 H 1.48504 * 109.46950 * 179.97438 * 18 16 14 21 21 H 1.48498 * 109.47305 * 299.99793 * 18 16 14 22 22 H 1.07999 * 119.85808 * 180.02562 * 6 4 3 23 23 H 1.08005 * 119.79246 * 179.97438 * 7 6 4 24 24 H 1.08000 * 119.94268 * 179.97438 * 8 7 6 25 25 H 1.09000 * 109.47198 * 300.00411 * 11 10 9 26 26 H 1.08999 * 109.46748 * 60.00167 * 11 10 9 27 27 H 1.09000 * 109.47222 * 300.00038 * 12 11 10 28 28 H 1.08993 * 109.46886 * 60.00399 * 12 11 10 29 29 H 1.09000 * 109.47020 * 299.99729 * 13 12 11 30 30 H 1.08993 * 109.47537 * 60.00365 * 13 12 11 31 31 H 0.97003 * 119.99821 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2710 0.8642 0.8459 5 17 2.4096 1.9400 1.9015 6 6 4.6509 0.8594 0.8399 7 6 5.3424 0.0036 -0.0005 8 6 4.6597 -0.8534 -0.8416 9 6 3.2735 -0.8628 -0.8495 10 8 2.6025 -1.7008 -1.6796 11 6 3.3883 -2.5475 -2.5208 12 6 2.4640 -3.4134 -3.3791 13 6 3.3054 -4.3205 -4.2792 14 6 2.3949 -5.1729 -5.1250 15 1 1.3234 -5.0776 -5.0298 16 6 2.9300 -6.0745 -6.0206 17 7 4.2349 -6.1902 -6.1369 18 14 1.8015 -7.1316 -7.0685 19 1 0.9436 -6.2578 -7.9085 20 1 2.6181 -8.0111 -7.9432 21 1 0.9456 -7.9661 -6.1875 22 1 5.1937 1.5261 1.4936 23 1 6.4225 0.0068 0.0009 24 1 5.2069 -1.5175 -1.4944 25 1 4.0164 -1.9351 -3.1678 26 1 4.0183 -3.1886 -1.9041 27 1 1.8356 -4.0258 -2.7323 28 1 1.8344 -2.7720 -3.9957 29 1 3.9340 -3.7083 -4.9260 30 1 3.9347 -4.9619 -3.6623 31 1 4.6113 -6.8248 -6.7666 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000128931407.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:25:19 Heat of formation + Delta-G solvation = -7.711444 kcal Electronic energy + Delta-G solvation = -16320.351494 eV Core-core repulsion = 13399.667875 eV Total energy + Delta-G solvation = -2920.683619 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -40.54742 -38.13088 -36.68116 -36.38133 -34.16422 -32.06266 -31.42754 -30.18854 -27.14346 -24.34248 -23.82155 -22.12441 -20.54652 -19.33780 -17.88584 -16.68907 -16.18506 -16.17863 -15.57092 -15.07721 -14.50835 -14.42740 -13.97888 -13.28481 -13.21835 -12.89028 -12.86289 -12.44242 -12.17537 -11.95183 -11.76084 -11.67490 -11.34334 -11.09664 -10.77164 -10.67638 -10.65573 -9.88846 -9.62253 -9.25490 -9.21557 -8.54746 -8.44240 -6.09946 -4.12726 0.37297 0.90837 1.58656 2.67301 2.76972 3.09623 3.29660 3.33794 3.37324 3.56232 3.70734 4.39565 4.50888 4.72411 4.76460 4.91462 5.09410 5.26334 5.33316 5.34466 5.64487 5.74966 5.81724 5.96272 6.09803 6.41610 6.52214 6.86477 7.20376 7.50269 7.51120 7.61182 7.88020 8.29193 8.93002 9.52145 11.01418 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.039054 B = 0.003375 C = 0.003115 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 716.790966 B = 8294.822160 C = 8985.843516 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.405 5.405 2 C 0.262 3.738 3 C -0.066 4.066 4 C 0.042 3.958 5 Cl -0.050 7.050 6 C -0.157 4.157 7 C -0.035 4.035 8 C -0.207 4.207 9 C 0.201 3.799 10 O -0.303 6.303 11 C 0.055 3.945 12 C -0.110 4.110 13 C 0.026 3.974 14 C -0.524 4.524 15 H 0.057 0.943 16 C 0.058 3.942 17 N -0.895 5.895 18 Si 0.895 3.105 19 H -0.276 1.276 20 H -0.287 1.287 21 H -0.276 1.276 22 H 0.144 0.856 23 H 0.144 0.856 24 H 0.150 0.850 25 H 0.067 0.933 26 H 0.067 0.933 27 H 0.061 0.939 28 H 0.061 0.939 29 H 0.020 0.980 30 H 0.020 0.980 31 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.264 14.672 14.530 21.310 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.080 5.080 2 C -0.053 4.053 3 C -0.071 4.071 4 C 0.012 3.988 5 Cl -0.020 7.020 6 C -0.176 4.176 7 C -0.054 4.054 8 C -0.226 4.226 9 C 0.150 3.850 10 O -0.215 6.215 11 C -0.019 4.019 12 C -0.148 4.148 13 C -0.011 4.011 14 C -0.562 4.562 15 H 0.075 0.925 16 C -0.143 4.143 17 N -0.534 5.534 18 Si 0.723 3.277 19 H -0.201 1.201 20 H -0.212 1.212 21 H -0.201 1.201 22 H 0.161 0.839 23 H 0.161 0.839 24 H 0.167 0.833 25 H 0.085 0.915 26 H 0.085 0.915 27 H 0.080 0.920 28 H 0.080 0.920 29 H 0.038 0.962 30 H 0.038 0.962 31 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges 3.342 14.616 14.472 20.839 hybrid contribution 0.094 -0.613 -0.605 0.866 sum 3.437 14.004 13.868 20.006 Atomic orbital electron populations 1.81182 1.11654 1.07579 1.07618 1.24994 0.92037 0.94159 0.94156 1.15010 0.85159 1.03220 1.03755 1.20623 0.92365 0.92746 0.93046 1.98407 1.77076 1.62650 1.63916 1.20866 0.90940 1.02843 1.02957 1.21143 1.00679 0.91782 0.91813 1.21484 0.92361 1.04312 1.04456 1.18881 0.90388 0.87819 0.87896 1.86177 1.37138 1.48817 1.49356 1.23458 0.95381 0.91474 0.91599 1.21774 0.98585 0.97176 0.97268 1.19039 0.95023 0.93476 0.93534 1.21138 0.93134 1.20762 1.21182 0.92480 1.25007 0.95086 0.97128 0.97090 1.69939 1.10390 1.36444 1.36655 0.86606 0.80584 0.80291 0.80260 1.20139 1.21211 1.20134 0.83855 0.83871 0.83276 0.91453 0.91453 0.91997 0.91991 0.96201 0.96200 0.92796 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.40 -6.85 18.54 41.84 0.78 -6.07 16 2 C 0.26 3.95 13.93 -22.47 -0.31 3.64 16 3 C -0.07 -0.84 5.75 -106.65 -0.61 -1.45 16 4 C 0.04 0.42 6.35 -39.07 -0.25 0.17 16 5 Cl -0.05 -0.49 28.03 -51.86 -1.45 -1.95 16 6 C -0.16 -1.19 9.81 -39.59 -0.39 -1.58 16 7 C -0.04 -0.25 10.03 -39.54 -0.40 -0.65 16 8 C -0.21 -2.01 9.03 -39.48 -0.36 -2.36 16 9 C 0.20 2.55 6.69 -38.71 -0.26 2.29 16 10 O -0.30 -4.70 9.57 -18.82 -0.18 -4.88 16 11 C 0.05 0.84 4.74 37.16 0.18 1.01 16 12 C -0.11 -2.17 5.52 -26.73 -0.15 -2.31 16 13 C 0.03 0.64 4.97 -27.88 -0.14 0.50 16 14 C -0.52 -14.42 9.11 -34.44 -0.31 -14.74 16 15 H 0.06 1.54 7.74 -52.49 -0.41 1.13 16 16 C 0.06 1.63 5.46 -17.82 -0.10 1.54 16 17 N -0.90 -25.99 13.29 55.43 0.74 -25.26 16 18 Si 0.89 21.28 29.54 -169.99 -5.02 16.26 16 19 H -0.28 -6.47 7.11 56.52 0.40 -6.07 16 20 H -0.29 -6.72 7.11 56.52 0.40 -6.32 16 21 H -0.28 -6.47 7.11 56.52 0.40 -6.07 16 22 H 0.14 0.73 8.06 -52.49 -0.42 0.30 16 23 H 0.14 0.59 8.06 -52.48 -0.42 0.17 16 24 H 0.15 1.30 6.29 -52.49 -0.33 0.97 16 25 H 0.07 0.94 7.67 -51.93 -0.40 0.54 16 26 H 0.07 0.94 7.66 -51.93 -0.40 0.54 16 27 H 0.06 1.23 8.14 -51.93 -0.42 0.81 16 28 H 0.06 1.23 8.14 -51.93 -0.42 0.81 16 29 H 0.02 0.50 8.14 -51.93 -0.42 0.07 16 30 H 0.02 0.50 8.14 -51.93 -0.42 0.07 16 31 H 0.26 7.21 8.31 -40.82 -0.34 6.87 16 LS Contribution 298.02 15.07 4.49 4.49 Total: -1.00 -30.55 298.02 -6.95 -37.50 By element: Atomic # 1 Polarization: -2.95 SS G_CDS: -3.20 Total: -6.15 kcal Atomic # 6 Polarization: -10.84 SS G_CDS: -3.10 Total: -13.94 kcal Atomic # 7 Polarization: -32.84 SS G_CDS: 1.51 Total: -31.33 kcal Atomic # 8 Polarization: -4.70 SS G_CDS: -0.18 Total: -4.88 kcal Atomic # 14 Polarization: 21.28 SS G_CDS: -5.02 Total: 16.26 kcal Atomic # 17 Polarization: -0.49 SS G_CDS: -1.45 Total: -1.95 kcal Total LS contribution 4.49 Total: 4.49 kcal Total: -30.55 -6.95 -37.50 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000128931407.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.786 kcal (2) G-P(sol) polarization free energy of solvation -30.546 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.760 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.951 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.497 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.711 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds