Wall clock time and date at job start Mon Mar 30 2020 06:38:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.36808 * 125.06850 * 2 1 4 4 C 1.34248 * 109.92664 * 180.02562 * 3 2 1 5 5 C 1.46486 * 107.00143 * 359.97438 * 4 3 2 6 6 C 1.39662 * 134.01919 * 180.02562 * 5 4 3 7 7 C 1.36615 * 119.78773 * 180.02562 * 6 5 4 8 8 C 1.38834 * 120.53803 * 359.96763 * 7 6 5 9 9 C 1.50694 * 119.67515 * 179.97438 * 8 7 6 10 10 H 1.09000 * 109.46891 * 215.02020 * 9 8 7 11 11 O 1.42898 * 109.47287 * 335.01586 * 9 8 7 12 12 C 1.50699 * 109.47255 * 95.01766 * 9 8 7 13 13 H 1.07994 * 120.00286 * 0.02562 * 12 9 8 14 14 C 1.37881 * 119.99922 * 179.97438 * 12 9 8 15 15 N 1.31522 * 120.00020 * 180.02562 * 14 12 9 16 16 Si 1.86796 * 120.00185 * 0.02562 * 14 12 9 17 17 H 1.48502 * 109.47526 * 89.99713 * 16 14 12 18 18 H 1.48500 * 109.47286 * 209.99913 * 16 14 12 19 19 H 1.48503 * 109.46953 * 329.99939 * 16 14 12 20 20 C 1.37852 * 120.64703 * 0.02562 * 8 7 6 21 21 Cl 1.73600 * 120.11741 * 179.97438 * 20 8 7 22 22 C 1.37732 * 125.06394 * 180.02562 * 2 1 3 23 23 H 1.09001 * 109.46980 * 269.97365 * 1 2 3 24 24 H 1.08998 * 109.46996 * 29.97657 * 1 2 3 25 25 H 1.09005 * 109.46723 * 149.97590 * 1 2 3 26 26 H 1.07999 * 125.04039 * 0.04419 * 3 2 1 27 27 H 1.07998 * 126.49887 * 180.26767 * 4 3 2 28 28 H 1.08002 * 120.10730 * 359.95799 * 6 5 4 29 29 H 1.08005 * 119.73262 * 179.97438 * 7 6 5 30 30 H 0.96700 * 114.00036 * 60.00521 * 11 9 8 31 31 H 0.96994 * 119.99809 * 180.02562 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2511 1.1197 0.0000 4 6 3.5469 0.7691 -0.0006 5 6 3.5945 -0.6950 -0.0003 6 6 4.6297 -1.6324 -0.0002 7 6 4.3370 -2.9669 -0.0005 8 6 3.0179 -3.3997 -0.0003 9 6 2.7172 -4.8763 -0.0012 10 1 1.8198 -5.0640 -0.5907 11 8 3.8186 -5.5864 -0.5712 12 6 2.4958 -5.3448 1.4139 13 1 2.5654 -4.6434 2.2321 14 6 2.2034 -6.6689 1.6640 15 7 2.0096 -7.0776 2.8989 16 14 2.0822 -7.8821 0.2488 17 1 3.4167 -8.4824 -0.0043 18 1 1.1153 -8.9539 0.5970 19 1 1.6184 -7.1743 -0.9716 20 6 1.9805 -2.4919 -0.0002 21 17 0.3361 -3.0484 -0.0006 22 6 2.2563 -1.1274 -0.0005 23 1 -0.3633 -0.0005 1.0277 24 1 -0.3633 0.8902 -0.5135 25 1 -0.3633 -0.8898 -0.5142 26 1 1.8836 2.1353 0.0007 27 1 4.3938 1.4393 0.0034 28 1 5.6584 -1.3035 -0.0010 29 1 5.1383 -3.6910 -0.0009 30 1 4.6524 -5.4654 -0.0968 31 1 1.8043 -8.0091 3.0748 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259450625.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:38:23 Heat of formation + Delta-G solvation = 10.254013 kcal Electronic energy + Delta-G solvation = -17710.452020 eV Core-core repulsion = 14790.547441 eV Total energy + Delta-G solvation = -2919.904578 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -41.04688 -37.79363 -35.92736 -35.24740 -32.41393 -32.27931 -30.04961 -29.35432 -26.71954 -25.96135 -22.94638 -22.09036 -20.46200 -19.70395 -17.46661 -16.92334 -16.05207 -15.62801 -15.22919 -14.91927 -14.33341 -14.15584 -13.28696 -13.18824 -13.00366 -12.80479 -12.76463 -12.45439 -11.86510 -11.72534 -11.50579 -11.14797 -10.93977 -10.78568 -10.44717 -10.21555 -9.80309 -9.26346 -9.10712 -8.71404 -8.65177 -7.73373 -7.21053 -6.12589 -4.24192 1.41031 1.97610 2.72920 2.88430 2.99220 3.45024 3.48084 3.61042 4.22224 4.49489 4.82751 4.89081 4.97748 5.16377 5.26957 5.36907 5.54158 5.60575 5.69832 5.75163 5.92500 6.05810 6.10928 6.30711 6.67472 6.83804 6.96642 7.00585 7.35501 7.43517 7.44913 7.49780 8.27212 8.77495 8.95915 9.48756 10.97438 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.027911 B = 0.007156 C = 0.006269 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1002.960584 B = 3912.076220 C = 4465.135780 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.070 3.930 2 N -0.483 5.483 3 C 0.040 3.960 4 C -0.202 4.202 5 C -0.117 4.117 6 C -0.071 4.071 7 C -0.128 4.128 8 C -0.032 4.032 9 C 0.222 3.778 10 H 0.080 0.920 11 O -0.580 6.580 12 C -0.544 4.544 13 H 0.076 0.924 14 C 0.086 3.914 15 N -0.889 5.889 16 Si 0.907 3.093 17 H -0.277 1.277 18 H -0.304 1.304 19 H -0.267 1.267 20 C -0.047 4.047 21 Cl -0.071 7.071 22 C 0.107 3.893 23 H 0.068 0.932 24 H 0.077 0.923 25 H 0.089 0.911 26 H 0.165 0.835 27 H 0.144 0.856 28 H 0.122 0.878 29 H 0.130 0.870 30 H 0.362 0.638 31 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.082 14.790 -6.612 16.201 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 N -0.167 5.167 3 C -0.084 4.084 4 C -0.227 4.227 5 C -0.122 4.122 6 C -0.090 4.090 7 C -0.147 4.147 8 C -0.034 4.034 9 C 0.165 3.835 10 H 0.098 0.902 11 O -0.387 6.387 12 C -0.581 4.581 13 H 0.094 0.906 14 C -0.119 4.119 15 N -0.526 5.526 16 Si 0.736 3.264 17 H -0.203 1.203 18 H -0.232 1.232 19 H -0.192 1.192 20 C -0.076 4.076 21 Cl -0.042 7.042 22 C 0.000 4.000 23 H 0.086 0.914 24 H 0.096 0.904 25 H 0.108 0.892 26 H 0.182 0.818 27 H 0.162 0.838 28 H 0.140 0.860 29 H 0.148 0.852 30 H 0.210 0.790 31 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -0.939 14.453 -6.921 16.052 hybrid contribution 0.009 -0.405 -0.013 0.405 sum -0.930 14.049 -6.934 15.694 Atomic orbital electron populations 1.22177 0.77316 1.04412 1.03236 1.43728 1.05806 1.04030 1.63114 1.21684 0.90542 0.90816 1.05407 1.21566 0.95768 0.92639 1.12755 1.19033 0.91293 0.93456 1.08406 1.20240 0.97675 0.91914 0.99130 1.20401 0.95688 0.95247 1.03347 1.20578 0.91354 0.98109 0.93395 1.19110 0.86792 0.81993 0.95633 0.90232 1.86451 1.20649 1.73248 1.58400 1.21253 1.50581 0.95456 0.90792 0.90581 1.24963 0.92720 0.98408 0.95812 1.69942 1.46422 1.16769 1.19431 0.86345 0.77710 0.79766 0.82559 1.20260 1.23197 1.19150 1.19489 0.85996 0.89050 1.13084 1.98307 1.19106 1.89636 1.97123 1.17855 0.90537 0.86537 1.05043 0.91350 0.90436 0.89242 0.81821 0.83789 0.85989 0.85240 0.79020 0.92460 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.82 10.49 59.85 0.63 1.44 16 2 N -0.48 -7.12 3.18 -121.78 -0.39 -7.51 16 3 C 0.04 0.50 11.29 -16.74 -0.19 0.31 16 4 C -0.20 -2.73 11.08 -37.67 -0.42 -3.15 16 5 C -0.12 -1.99 6.37 -105.14 -0.67 -2.66 16 6 C -0.07 -1.16 10.05 -39.64 -0.40 -1.56 16 7 C -0.13 -2.35 9.23 -39.95 -0.37 -2.71 16 8 C -0.03 -0.68 5.01 -104.55 -0.52 -1.20 16 9 C 0.22 5.32 2.04 -29.04 -0.06 5.26 16 10 H 0.08 2.01 6.15 -51.93 -0.32 1.69 16 11 O -0.58 -13.19 10.68 -35.23 -0.38 -13.57 16 12 C -0.54 -15.05 9.33 -34.44 -0.32 -15.37 16 13 H 0.08 2.32 7.98 -52.49 -0.42 1.90 16 14 C 0.09 2.46 5.47 -17.81 -0.10 2.36 16 15 N -0.89 -26.89 13.96 55.43 0.77 -26.12 16 16 Si 0.91 23.11 26.18 -169.99 -4.45 18.66 16 17 H -0.28 -6.98 7.11 56.52 0.40 -6.58 16 18 H -0.30 -7.69 7.11 56.52 0.40 -7.29 16 19 H -0.27 -6.76 6.54 56.52 0.37 -6.39 16 20 C -0.05 -0.95 6.33 -39.36 -0.25 -1.20 16 21 Cl -0.07 -1.37 24.46 -51.86 -1.27 -2.64 16 22 C 0.11 1.93 6.78 -83.95 -0.57 1.37 16 23 H 0.07 0.76 8.14 -51.93 -0.42 0.34 16 24 H 0.08 0.64 8.14 -51.93 -0.42 0.22 16 25 H 0.09 1.13 5.72 -51.93 -0.30 0.84 16 26 H 0.16 1.34 8.06 -52.49 -0.42 0.92 16 27 H 0.14 1.53 8.06 -52.49 -0.42 1.11 16 28 H 0.12 1.60 8.06 -52.49 -0.42 1.18 16 29 H 0.13 2.11 6.36 -52.48 -0.33 1.78 16 30 H 0.36 7.07 7.28 45.56 0.33 7.41 16 31 H 0.27 7.56 8.31 -40.82 -0.34 7.22 16 LS Contribution 274.91 15.07 4.14 4.14 Total: -1.00 -32.68 274.91 -7.12 -39.80 By element: Atomic # 1 Polarization: 6.66 SS G_CDS: -2.32 Total: 4.34 kcal Atomic # 6 Polarization: -13.87 SS G_CDS: -3.24 Total: -17.11 kcal Atomic # 7 Polarization: -34.01 SS G_CDS: 0.39 Total: -33.62 kcal Atomic # 8 Polarization: -13.19 SS G_CDS: -0.38 Total: -13.57 kcal Atomic # 14 Polarization: 23.11 SS G_CDS: -4.45 Total: 18.66 kcal Atomic # 17 Polarization: -1.37 SS G_CDS: -1.27 Total: -2.64 kcal Total LS contribution 4.14 Total: 4.14 kcal Total: -32.68 -7.12 -39.80 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259450625.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 50.053 kcal (2) G-P(sol) polarization free energy of solvation -32.681 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 17.372 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.118 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.799 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.254 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds