Wall clock time and date at job start Mon Mar 30 2020 06:38:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.36813 * 125.06927 * 2 1 4 4 C 1.34243 * 109.92846 * 179.97438 * 3 2 1 5 5 C 1.46483 * 106.99892 * 0.02562 * 4 3 2 6 6 C 1.39668 * 134.01570 * 180.02562 * 5 4 3 7 7 C 1.36610 * 119.78584 * 179.97438 * 6 5 4 8 8 C 1.38831 * 120.54123 * 0.02767 * 7 6 5 9 9 C 1.50698 * 119.67854 * 179.97438 * 8 7 6 10 10 H 1.08998 * 109.47083 * 144.99637 * 9 8 7 11 11 O 1.42908 * 109.46812 * 25.00151 * 9 8 7 12 12 C 1.50697 * 109.46993 * 265.00222 * 9 8 7 13 13 H 1.07991 * 120.00449 * 359.72131 * 12 9 8 14 14 C 1.37885 * 119.99686 * 179.97438 * 12 9 8 15 15 N 1.31514 * 120.00035 * 179.72339 * 14 12 9 16 16 Si 1.86803 * 119.99853 * 359.72191 * 14 12 9 17 17 H 1.48500 * 109.46986 * 90.00256 * 16 14 12 18 18 H 1.48496 * 109.47029 * 210.00273 * 16 14 12 19 19 H 1.48499 * 109.47352 * 330.00102 * 16 14 12 20 20 C 1.37851 * 120.64514 * 0.24829 * 8 7 6 21 21 Cl 1.73609 * 120.11805 * 179.70457 * 20 8 7 22 22 C 1.37726 * 125.06505 * 179.97438 * 2 1 3 23 23 H 1.08993 * 109.47337 * 90.01649 * 1 2 3 24 24 H 1.08998 * 109.46929 * 210.02345 * 1 2 3 25 25 H 1.08999 * 109.46703 * 330.02269 * 1 2 3 26 26 H 1.08008 * 125.03326 * 359.94708 * 3 2 1 27 27 H 1.08001 * 126.49890 * 179.97438 * 4 3 2 28 28 H 1.08000 * 120.10608 * 0.02562 * 6 5 4 29 29 H 1.08007 * 119.73103 * 179.97438 * 7 6 5 30 30 H 0.96704 * 113.99704 * 299.99976 * 11 9 8 31 31 H 0.97000 * 119.99706 * 179.97438 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2511 1.1198 0.0000 4 6 3.5470 0.7691 0.0006 5 6 3.5944 -0.6949 0.0003 6 6 4.6298 -1.6323 0.0011 7 6 4.3371 -2.9667 0.0011 8 6 3.0180 -3.3996 -0.0002 9 6 2.7174 -4.8763 -0.0008 10 1 1.8195 -5.0645 0.5878 11 8 3.8183 -5.5868 0.5696 12 6 2.4972 -5.3436 -1.4165 13 1 2.5635 -4.6407 -2.2336 14 6 2.2060 -6.6676 -1.6680 15 7 2.0085 -7.0744 -2.9030 16 14 2.0920 -7.8837 -0.2546 17 1 0.6952 -7.9296 0.2475 18 1 2.4922 -9.2328 -0.7288 19 1 2.9981 -7.4554 0.8413 20 6 1.9806 -2.4919 -0.0067 21 17 0.3362 -3.0484 -0.0161 22 6 2.2563 -1.1273 0.0005 23 1 -0.3633 -0.0003 -1.0276 24 1 -0.3633 -0.8898 0.5142 25 1 -0.3633 0.8902 0.5135 26 1 1.8835 2.1354 -0.0008 27 1 4.3938 1.4394 0.0003 28 1 5.6585 -1.3033 0.0026 29 1 5.1385 -3.6909 0.0013 30 1 4.6526 -5.4652 0.0960 31 1 1.8040 -8.0059 -3.0799 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259450628.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:38:24 Heat of formation + Delta-G solvation = 13.228941 kcal Electronic energy + Delta-G solvation = -17713.857264 eV Core-core repulsion = 14794.081689 eV Total energy + Delta-G solvation = -2919.775576 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -41.04143 -37.77762 -35.91732 -35.22343 -32.40408 -32.25194 -30.03970 -29.33668 -26.69373 -25.95487 -22.93453 -22.08013 -20.45022 -19.68754 -17.43571 -16.91422 -16.04290 -15.61787 -15.22382 -14.86498 -14.32777 -14.15953 -13.31582 -13.19464 -12.99240 -12.77887 -12.74096 -12.43985 -11.87705 -11.69508 -11.50156 -11.20456 -10.90059 -10.75574 -10.35575 -10.28842 -9.84823 -9.18244 -9.00939 -8.65457 -8.45041 -7.72711 -7.20464 -6.10720 -4.21578 1.41687 1.98321 2.73574 2.88958 2.99654 3.40280 3.49500 3.74740 4.22955 4.54288 4.83086 4.89629 4.98634 5.21863 5.27227 5.37536 5.54632 5.61020 5.70563 5.76504 5.93732 6.06653 6.11576 6.31767 6.67744 6.84536 6.97242 7.01335 7.36366 7.44348 7.45403 7.51974 8.29768 8.80689 8.99132 9.51863 10.99514 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.027928 B = 0.007156 C = 0.006268 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1002.322523 B = 3911.772559 C = 4465.786193 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.071 3.929 2 N -0.483 5.483 3 C 0.040 3.960 4 C -0.202 4.202 5 C -0.117 4.117 6 C -0.071 4.071 7 C -0.127 4.127 8 C -0.032 4.032 9 C 0.225 3.775 10 H 0.074 0.926 11 O -0.575 6.575 12 C -0.546 4.546 13 H 0.074 0.926 14 C 0.088 3.912 15 N -0.889 5.889 16 Si 0.863 3.137 17 H -0.286 1.286 18 H -0.294 1.294 19 H -0.216 1.216 20 C -0.047 4.047 21 Cl -0.071 7.071 22 C 0.107 3.893 23 H 0.068 0.932 24 H 0.089 0.911 25 H 0.077 0.923 26 H 0.164 0.836 27 H 0.144 0.856 28 H 0.122 0.878 29 H 0.130 0.870 30 H 0.357 0.643 31 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.267 14.715 6.871 16.242 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 N -0.167 5.167 3 C -0.085 4.085 4 C -0.227 4.227 5 C -0.122 4.122 6 C -0.090 4.090 7 C -0.146 4.146 8 C -0.034 4.034 9 C 0.167 3.833 10 H 0.092 0.908 11 O -0.382 6.382 12 C -0.583 4.583 13 H 0.093 0.907 14 C -0.117 4.117 15 N -0.526 5.526 16 Si 0.689 3.311 17 H -0.212 1.212 18 H -0.221 1.221 19 H -0.139 1.139 20 C -0.076 4.076 21 Cl -0.042 7.042 22 C 0.000 4.000 23 H 0.086 0.914 24 H 0.107 0.893 25 H 0.096 0.904 26 H 0.182 0.818 27 H 0.162 0.838 28 H 0.140 0.860 29 H 0.148 0.852 30 H 0.204 0.796 31 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -0.744 14.376 7.187 16.089 hybrid contribution -0.121 -0.424 -0.094 0.450 sum -0.865 13.952 7.093 15.675 Atomic orbital electron populations 1.22170 0.77326 1.04392 1.03227 1.43729 1.05799 1.04037 1.63127 1.21684 0.90544 0.90812 1.05428 1.21564 0.95764 0.92648 1.12752 1.19034 0.91299 0.93449 1.08417 1.20242 0.97664 0.91928 0.99167 1.20404 0.95704 0.95234 1.03296 1.20597 0.91335 0.98159 0.93341 1.18942 0.86883 0.81949 0.95495 0.90846 1.86750 1.20341 1.72676 1.58408 1.21224 1.50864 0.95419 0.90778 0.90741 1.24931 0.92670 0.98383 0.95719 1.69940 1.46324 1.16799 1.19541 0.87143 0.79298 0.79472 0.85165 1.21242 1.22082 1.13851 1.19499 0.86011 0.89048 1.13083 1.98308 1.19125 1.89643 1.97124 1.17859 0.90533 0.86546 1.05057 0.91361 0.89256 0.90444 0.81832 0.83796 0.86004 0.85226 0.79557 0.92540 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.82 10.48 59.85 0.63 1.45 16 2 N -0.48 -7.13 3.18 -121.78 -0.39 -7.52 16 3 C 0.04 0.50 11.29 -16.74 -0.19 0.31 16 4 C -0.20 -2.74 11.08 -37.67 -0.42 -3.15 16 5 C -0.12 -1.99 6.37 -105.14 -0.67 -2.66 16 6 C -0.07 -1.17 10.05 -39.64 -0.40 -1.57 16 7 C -0.13 -2.34 9.23 -39.95 -0.37 -2.70 16 8 C -0.03 -0.68 5.01 -104.55 -0.52 -1.20 16 9 C 0.22 5.34 2.04 -29.04 -0.06 5.28 16 10 H 0.07 1.82 6.54 -51.93 -0.34 1.48 16 11 O -0.57 -12.95 9.77 -35.23 -0.34 -13.30 16 12 C -0.55 -15.08 9.33 -34.44 -0.32 -15.40 16 13 H 0.07 2.28 7.98 -52.49 -0.42 1.86 16 14 C 0.09 2.51 5.47 -17.82 -0.10 2.41 16 15 N -0.89 -27.02 13.96 55.43 0.77 -26.24 16 16 Si 0.86 21.67 26.99 -169.99 -4.59 17.08 16 17 H -0.29 -7.21 7.11 56.52 0.40 -6.81 16 18 H -0.29 -7.40 7.11 56.52 0.40 -6.99 16 19 H -0.22 -5.27 5.29 56.52 0.30 -4.97 16 20 C -0.05 -0.95 6.33 -39.36 -0.25 -1.20 16 21 Cl -0.07 -1.38 24.47 -51.86 -1.27 -2.65 16 22 C 0.11 1.93 6.78 -83.95 -0.57 1.36 16 23 H 0.07 0.76 8.14 -51.93 -0.42 0.34 16 24 H 0.09 1.13 5.74 -51.93 -0.30 0.84 16 25 H 0.08 0.64 8.14 -51.93 -0.42 0.22 16 26 H 0.16 1.34 8.06 -52.48 -0.42 0.92 16 27 H 0.14 1.53 8.06 -52.49 -0.42 1.11 16 28 H 0.12 1.60 8.06 -52.49 -0.42 1.18 16 29 H 0.13 2.12 6.36 -52.48 -0.33 1.78 16 30 H 0.36 6.96 7.28 45.56 0.33 7.29 16 31 H 0.27 7.59 8.31 -40.82 -0.34 7.25 16 LS Contribution 273.99 15.07 4.13 4.13 Total: -1.00 -32.75 273.99 -7.33 -40.08 By element: Atomic # 1 Polarization: 7.90 SS G_CDS: -2.41 Total: 5.49 kcal Atomic # 6 Polarization: -13.85 SS G_CDS: -3.24 Total: -17.08 kcal Atomic # 7 Polarization: -34.15 SS G_CDS: 0.39 Total: -33.76 kcal Atomic # 8 Polarization: -12.95 SS G_CDS: -0.34 Total: -13.30 kcal Atomic # 14 Polarization: 21.67 SS G_CDS: -4.59 Total: 17.08 kcal Atomic # 17 Polarization: -1.38 SS G_CDS: -1.27 Total: -2.65 kcal Total LS contribution 4.13 Total: 4.13 kcal Total: -32.75 -7.33 -40.08 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259450628.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 53.311 kcal (2) G-P(sol) polarization free energy of solvation -32.750 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.561 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.332 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.082 kcal (6) G-S(sol) free energy of system = (1) + (5) 13.229 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds