Wall clock time and date at job start Mon Mar 30 2020 06:38:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.37706 * 125.06083 * 2 1 4 4 C 1.39139 * 133.41985 * 359.96291 * 3 2 1 5 5 C 1.37713 * 119.94473 * 180.28964 * 4 3 2 6 6 C 1.38840 * 120.68017 * 359.97438 * 5 4 3 7 7 C 1.37717 * 120.37603 * 359.97438 * 6 5 4 8 8 Cl 1.73598 * 120.19104 * 180.02562 * 7 6 5 9 9 C 1.39745 * 119.62574 * 0.04213 * 7 6 5 10 10 C 1.46490 * 133.99591 * 179.97438 * 9 7 6 11 11 C 1.34230 * 106.99152 * 179.97438 * 10 9 7 12 12 C 1.50698 * 125.04142 * 179.97438 * 11 10 9 13 13 H 1.08996 * 109.47104 * 155.23868 * 12 11 10 14 14 O 1.42906 * 109.47051 * 35.23876 * 12 11 10 15 15 C 1.50704 * 109.47149 * 275.23904 * 12 11 10 16 16 H 1.07999 * 119.99896 * 359.72498 * 15 12 11 17 17 C 1.37877 * 119.99508 * 179.97438 * 15 12 11 18 18 N 1.31516 * 119.99856 * 179.72399 * 17 15 12 19 19 Si 1.86796 * 120.00448 * 359.72425 * 17 15 12 20 20 H 1.48503 * 109.47434 * 89.99988 * 19 17 15 21 21 H 1.48501 * 109.47410 * 210.00216 * 19 17 15 22 22 H 1.48499 * 109.46958 * 330.00004 * 19 17 15 23 23 H 1.09006 * 109.47061 * 265.02696 * 1 2 3 24 24 H 1.08997 * 109.47336 * 25.02648 * 1 2 3 25 25 H 1.08999 * 109.47536 * 145.03015 * 1 2 3 26 26 H 1.08002 * 120.02703 * 0.26619 * 4 3 2 27 27 H 1.07999 * 119.66005 * 179.97438 * 5 4 3 28 28 H 1.08001 * 119.81566 * 179.97438 * 6 5 4 29 29 H 1.07994 * 126.50623 * 359.95502 * 10 9 7 30 30 H 0.96696 * 113.99487 * 294.95466 * 14 12 11 31 31 H 0.96991 * 120.00361 * 179.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2561 1.1272 0.0000 4 6 1.9782 2.4905 -0.0007 5 6 3.0102 3.4024 -0.0065 6 6 4.3317 2.9767 -0.0112 7 6 4.6302 1.6323 -0.0096 8 17 6.2843 1.1053 -0.0148 9 6 3.5941 0.6946 -0.0041 10 6 3.5469 -0.7696 -0.0015 11 6 2.2512 -1.1202 0.0047 12 6 1.7382 -2.5372 0.0086 13 1 0.7390 -2.5607 0.4435 14 8 2.6142 -3.3587 0.7832 15 6 1.6830 -3.0554 -1.4054 16 1 1.9845 -2.4205 -2.2254 17 6 1.2426 -4.3383 -1.6526 18 7 1.1892 -4.7888 -2.8871 19 14 0.7218 -5.4368 -0.2344 20 1 -0.7290 -5.2550 0.0257 21 1 0.9881 -6.8554 -0.5832 22 1 1.4921 -5.0731 0.9820 23 1 -0.3633 -0.0891 1.0239 24 1 -0.3634 0.9311 -0.4347 25 1 -0.3634 -0.8421 -0.5890 26 1 0.9540 2.8334 0.0030 27 1 2.7892 4.4596 -0.0074 28 1 5.1301 3.7039 -0.0162 29 1 4.3937 -1.4397 -0.0043 30 1 3.5023 -3.4469 0.4108 31 1 0.8798 -5.6914 -3.0611 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259594802.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:38:17 Heat of formation + Delta-G solvation = 4.756621 kcal Electronic energy + Delta-G solvation = -17528.424592 eV Core-core repulsion = 14608.281629 eV Total energy + Delta-G solvation = -2920.142963 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -41.02166 -37.39031 -36.19290 -35.57239 -32.50752 -32.32310 -30.05850 -29.26152 -27.10834 -25.83553 -23.29897 -21.48519 -21.21330 -19.22118 -17.63406 -16.85615 -16.16416 -15.44388 -15.06750 -14.86145 -14.43445 -14.14466 -13.79003 -13.25527 -13.07534 -12.85562 -12.65760 -12.06019 -11.95295 -11.76379 -11.66614 -11.21322 -10.99814 -10.90708 -10.65107 -10.44398 -10.30383 -9.32261 -9.08450 -8.86234 -8.64071 -7.78043 -7.16570 -6.28251 -4.42988 1.24303 1.77294 2.44069 3.17893 3.22495 3.26269 3.38147 3.61909 4.01558 4.37192 4.92817 5.02809 5.07539 5.10302 5.29746 5.36636 5.49149 5.63000 5.65613 5.82473 5.87441 5.91680 6.21118 6.36155 6.54864 6.60951 6.66959 6.93618 7.27035 7.27180 7.62236 7.69260 8.12916 8.64781 8.82693 9.31601 10.81284 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.025631 B = 0.006162 C = 0.005428 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1092.184958 B = 4542.892319 C = 5157.420172 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.076 3.924 2 N -0.476 5.476 3 C 0.100 3.900 4 C -0.122 4.122 5 C -0.106 4.106 6 C -0.146 4.146 7 C 0.010 3.990 8 Cl -0.079 7.079 9 C -0.093 4.093 10 C -0.211 4.211 11 C 0.117 3.883 12 C 0.250 3.750 13 H 0.065 0.935 14 O -0.569 6.569 15 C -0.562 4.562 16 H 0.077 0.923 17 C 0.088 3.912 18 N -0.882 5.882 19 Si 0.866 3.134 20 H -0.285 1.285 21 H -0.291 1.291 22 H -0.216 1.216 23 H 0.065 0.935 24 H 0.076 0.924 25 H 0.094 0.906 26 H 0.119 0.881 27 H 0.128 0.872 28 H 0.126 0.874 29 H 0.145 0.855 30 H 0.365 0.635 31 H 0.268 0.732 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.894 12.944 6.587 14.647 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 N -0.160 5.160 3 C -0.007 4.007 4 C -0.143 4.143 5 C -0.125 4.125 6 C -0.166 4.166 7 C -0.017 4.017 8 Cl -0.050 7.050 9 C -0.099 4.099 10 C -0.234 4.234 11 C 0.010 3.990 12 C 0.191 3.809 13 H 0.082 0.918 14 O -0.375 6.375 15 C -0.599 4.599 16 H 0.095 0.905 17 C -0.118 4.118 18 N -0.518 5.518 19 Si 0.691 3.309 20 H -0.211 1.211 21 H -0.218 1.218 22 H -0.138 1.138 23 H 0.084 0.916 24 H 0.095 0.905 25 H 0.113 0.887 26 H 0.137 0.863 27 H 0.146 0.854 28 H 0.144 0.856 29 H 0.163 0.837 30 H 0.213 0.787 31 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges 1.126 12.638 6.856 14.421 hybrid contribution 0.178 -0.534 -0.035 0.564 sum 1.303 12.104 6.821 13.954 Atomic orbital electron populations 1.21960 0.77289 1.04503 1.02801 1.43801 1.05938 1.03742 1.62523 1.18104 0.89665 0.88337 1.04575 1.20006 0.99481 0.89178 1.05642 1.20539 0.91267 0.98747 1.01990 1.20637 0.97055 0.93092 1.05803 1.20216 0.83814 0.92801 1.04852 1.98333 1.18566 1.91241 1.96876 1.18922 0.90885 0.94046 1.06039 1.21164 0.95782 0.91264 1.15225 1.21855 0.90269 0.90068 0.96829 1.18439 0.89792 0.79772 0.92852 0.91751 1.86696 1.26245 1.70064 1.54464 1.21294 1.47756 1.00127 0.90731 0.90456 1.24975 0.93191 0.97684 0.95917 1.69926 1.44452 1.17709 1.19672 0.87114 0.79049 0.79123 0.85605 1.21133 1.21759 1.13846 0.91629 0.90488 0.88697 0.86291 0.85441 0.85565 0.83712 0.78664 0.92198 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 1.10 10.48 59.85 0.63 1.73 16 2 N -0.48 -8.71 3.18 -117.19 -0.37 -9.08 16 3 C 0.10 1.76 6.80 -83.99 -0.57 1.19 16 4 C -0.12 -1.73 9.87 -39.44 -0.39 -2.12 16 5 C -0.11 -1.34 10.01 -39.55 -0.40 -1.74 16 6 C -0.15 -2.01 9.81 -39.55 -0.39 -2.39 16 7 C 0.01 0.17 6.35 -39.21 -0.25 -0.08 16 8 Cl -0.08 -1.19 28.91 -51.86 -1.50 -2.69 16 9 C -0.09 -1.73 6.21 -105.11 -0.65 -2.38 16 10 C -0.21 -4.22 10.33 -37.67 -0.39 -4.61 16 11 C 0.12 2.43 5.85 -81.76 -0.48 1.95 16 12 C 0.25 5.61 2.36 -29.03 -0.07 5.54 16 13 H 0.06 1.43 6.89 -51.93 -0.36 1.07 16 14 O -0.57 -12.42 9.94 -35.23 -0.35 -12.77 16 15 C -0.56 -14.82 9.29 -34.44 -0.32 -15.14 16 16 H 0.08 2.29 7.98 -52.49 -0.42 1.87 16 17 C 0.09 2.40 5.47 -17.82 -0.10 2.31 16 18 N -0.88 -25.69 13.96 55.43 0.77 -24.92 16 19 Si 0.87 20.36 26.99 -169.99 -4.59 15.77 16 20 H -0.28 -6.64 7.11 56.52 0.40 -6.24 16 21 H -0.29 -6.95 7.11 56.52 0.40 -6.55 16 22 H -0.22 -4.97 5.29 56.52 0.30 -4.67 16 23 H 0.07 0.82 8.14 -51.93 -0.42 0.40 16 24 H 0.08 0.90 7.83 -51.93 -0.41 0.49 16 25 H 0.09 1.48 7.66 -51.93 -0.40 1.08 16 26 H 0.12 1.36 7.89 -52.49 -0.41 0.95 16 27 H 0.13 1.18 8.06 -52.49 -0.42 0.76 16 28 H 0.13 1.43 8.06 -52.49 -0.42 1.01 16 29 H 0.15 2.75 7.61 -52.49 -0.40 2.35 16 30 H 0.37 7.14 8.27 45.56 0.38 7.52 16 31 H 0.27 7.34 8.31 -40.82 -0.34 7.00 16 LS Contribution 282.02 15.07 4.25 4.25 Total: -1.00 -30.47 282.02 -7.68 -38.15 By element: Atomic # 1 Polarization: 9.57 SS G_CDS: -2.52 Total: 7.05 kcal Atomic # 6 Polarization: -12.38 SS G_CDS: -3.37 Total: -15.76 kcal Atomic # 7 Polarization: -34.40 SS G_CDS: 0.40 Total: -34.00 kcal Atomic # 8 Polarization: -12.42 SS G_CDS: -0.35 Total: -12.77 kcal Atomic # 14 Polarization: 20.36 SS G_CDS: -4.59 Total: 15.77 kcal Atomic # 17 Polarization: -1.19 SS G_CDS: -1.50 Total: -2.69 kcal Total LS contribution 4.25 Total: 4.25 kcal Total: -30.47 -7.68 -38.15 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259594802.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.909 kcal (2) G-P(sol) polarization free energy of solvation -30.469 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.440 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.683 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.152 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.757 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds