Wall clock time and date at job start Mon Mar 30 2020 06:38:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.36855 * 125.06376 * 2 1 4 4 C 1.34223 * 109.93155 * 179.84527 * 3 2 1 5 5 C 1.50700 * 126.50791 * 180.14998 * 4 3 2 6 6 H 1.08991 * 109.47781 * 215.29960 * 5 4 3 7 7 O 1.42904 * 109.47004 * 335.30242 * 5 4 3 8 8 C 1.50696 * 109.46961 * 95.29459 * 5 4 3 9 9 H 1.08002 * 119.99941 * 0.02562 * 8 5 4 10 10 C 1.37875 * 120.00294 * 180.02562 * 8 5 4 11 11 N 1.31517 * 120.00378 * 180.02562 * 10 8 5 12 12 Si 1.86805 * 119.99622 * 0.02562 * 10 8 5 13 13 H 1.48505 * 109.47138 * 90.00014 * 12 10 8 14 14 H 1.48507 * 109.46829 * 209.99597 * 12 10 8 15 15 H 1.48495 * 109.47221 * 329.99939 * 12 10 8 16 16 C 1.46496 * 106.99393 * 0.40218 * 4 3 2 17 17 C 1.37709 * 125.06417 * 180.30248 * 2 1 3 18 18 C 1.39103 * 133.42269 * 359.95604 * 17 2 1 19 19 C 1.37754 * 119.94450 * 180.02562 * 18 17 2 20 20 C 1.38800 * 120.68252 * 0.02562 * 19 18 17 21 21 C 1.37760 * 120.37254 * 359.96827 * 20 19 18 22 22 Cl 1.73597 * 120.18729 * 180.02562 * 21 20 19 23 23 H 1.09002 * 109.47391 * 269.69551 * 1 2 3 24 24 H 1.09001 * 109.46813 * 149.69607 * 1 2 3 25 25 H 1.09004 * 109.47041 * 29.69734 * 1 2 3 26 26 H 1.08000 * 125.03232 * 0.02562 * 3 2 1 27 27 H 0.96698 * 114.00367 * 59.99288 * 7 5 4 28 28 H 0.97001 * 119.99564 * 180.02562 * 11 10 8 29 29 H 1.08000 * 120.02892 * 0.02817 * 18 17 2 30 30 H 1.08002 * 119.66189 * 179.97438 * 19 18 17 31 31 H 1.08002 * 119.81272 * 179.97438 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2512 1.1202 0.0000 4 6 3.5469 0.7698 0.0034 5 6 4.7286 1.7050 0.0077 6 1 5.5357 1.2736 -0.5841 7 8 4.3440 2.9610 -0.5551 8 6 5.1997 1.9126 1.4240 9 1 4.6942 1.4165 2.2394 10 6 6.2759 2.7357 1.6790 11 7 6.6874 2.9165 2.9150 12 14 7.1497 3.5944 0.2687 13 1 6.5152 4.9144 0.0235 14 1 8.5798 3.7898 0.6181 15 1 7.0488 2.7615 -0.9566 16 6 3.5945 -0.6944 -0.0040 17 6 2.2561 -1.1271 -0.0060 18 6 1.9785 -2.4902 -0.0124 19 6 3.0109 -3.4022 -0.0169 20 6 4.3320 -2.9765 -0.0146 21 6 4.6305 -1.6316 -0.0084 22 17 6.2845 -1.1046 -0.0062 23 1 -0.3634 -0.0055 1.0276 24 1 -0.3633 -0.8873 -0.5186 25 1 -0.3633 0.8927 -0.5091 26 1 1.8835 2.1357 0.0004 27 1 3.6284 3.4032 -0.0782 28 1 7.4444 3.4959 3.0942 29 1 0.9544 -2.8331 -0.0138 30 1 2.7901 -4.4594 -0.0215 31 1 5.1305 -3.7037 -0.0178 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259625827.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:38:33 Heat of formation + Delta-G solvation = 9.014093 kcal Electronic energy + Delta-G solvation = -17780.843812 eV Core-core repulsion = 14860.885467 eV Total energy + Delta-G solvation = -2919.958345 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -40.96864 -37.01898 -36.15933 -35.48382 -32.43454 -32.16477 -29.84843 -28.66245 -27.84036 -25.50477 -22.55597 -22.10949 -21.17821 -19.05536 -17.39989 -16.57655 -16.20963 -15.33812 -15.09064 -14.80591 -14.30013 -14.00717 -13.93044 -13.31568 -13.01874 -12.81391 -12.51516 -12.13738 -11.72023 -11.55027 -11.52941 -11.16656 -10.91004 -10.72112 -10.48427 -10.19662 -9.82627 -9.20721 -8.96597 -8.56519 -8.49636 -7.88985 -6.98405 -6.03593 -4.12505 1.32933 1.83037 2.75748 3.12056 3.21295 3.50021 3.52703 3.66778 4.10755 4.56994 4.83236 4.96227 5.12519 5.20409 5.25750 5.31155 5.39378 5.44169 5.69044 5.83952 5.91776 6.02456 6.29380 6.35048 6.63170 6.67461 6.93271 7.08483 7.39492 7.55615 7.62592 7.72838 8.38052 8.89323 9.06642 9.59760 11.06939 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.020997 B = 0.008525 C = 0.006727 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1333.220910 B = 3283.712344 C = 4161.397293 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.085 3.915 2 N -0.491 5.491 3 C 0.027 3.973 4 C -0.127 4.127 5 C 0.249 3.751 6 H 0.078 0.922 7 O -0.583 6.583 8 C -0.534 4.534 9 H 0.073 0.927 10 C 0.084 3.916 11 N -0.893 5.893 12 Si 0.902 3.098 13 H -0.279 1.279 14 H -0.305 1.305 15 H -0.266 1.266 16 C -0.094 4.094 17 C 0.108 3.892 18 C -0.137 4.137 19 C -0.094 4.094 20 C -0.156 4.156 21 C 0.029 3.971 22 Cl -0.052 7.052 23 H 0.064 0.936 24 H 0.074 0.926 25 H 0.080 0.920 26 H 0.166 0.834 27 H 0.358 0.642 28 H 0.264 0.736 29 H 0.117 0.883 30 H 0.127 0.873 31 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.075 -9.348 -6.729 15.979 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 N -0.176 5.176 3 C -0.094 4.094 4 C -0.134 4.134 5 C 0.191 3.809 6 H 0.095 0.905 7 O -0.389 6.389 8 C -0.572 4.572 9 H 0.091 0.909 10 C -0.120 4.120 11 N -0.531 5.531 12 Si 0.732 3.268 13 H -0.205 1.205 14 H -0.233 1.233 15 H -0.191 1.191 16 C -0.100 4.100 17 C 0.000 4.000 18 C -0.158 4.158 19 C -0.113 4.113 20 C -0.177 4.177 21 C 0.001 3.999 22 Cl -0.022 7.022 23 H 0.083 0.917 24 H 0.093 0.907 25 H 0.098 0.902 26 H 0.183 0.817 27 H 0.204 0.796 28 H 0.073 0.927 29 H 0.135 0.865 30 H 0.145 0.855 31 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -10.692 -9.303 -7.045 15.827 hybrid contribution 0.059 0.609 -0.015 0.612 sum -10.633 -8.694 -7.060 15.443 Atomic orbital electron populations 1.21823 0.77729 1.03586 1.02546 1.43649 1.05350 1.04169 1.64431 1.21374 0.89858 0.90588 1.07616 1.21497 0.95478 0.91743 1.04646 1.18570 0.88558 0.78618 0.95104 0.90496 1.86452 1.57309 1.36591 1.58594 1.21315 1.15369 1.29203 0.91277 0.90887 1.24956 0.95986 0.95472 0.95582 1.69953 1.26344 1.37494 1.19265 0.86415 0.76751 0.80722 0.82907 1.20470 1.23340 1.19067 1.18821 0.90855 0.93555 1.06810 1.18084 0.89586 0.88299 1.03982 1.19909 0.99239 0.89129 1.07557 1.20576 0.91376 0.98688 1.00697 1.20691 0.97071 0.93242 1.06654 1.20414 0.85462 0.92671 1.01310 1.98395 1.16801 1.90711 1.96318 0.91697 0.90684 0.90156 0.81685 0.79595 0.92683 0.86531 0.85494 0.85424 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.86 11.03 59.85 0.66 1.52 16 2 N -0.49 -7.67 3.18 -121.80 -0.39 -8.06 16 3 C 0.03 0.49 10.62 -16.72 -0.18 0.31 16 4 C -0.13 -2.73 5.39 -102.71 -0.55 -3.29 16 5 C 0.25 6.07 2.21 -29.04 -0.06 6.00 16 6 H 0.08 2.00 5.69 -51.93 -0.30 1.70 16 7 O -0.58 -13.39 10.82 -35.23 -0.38 -13.77 16 8 C -0.53 -14.96 9.33 -34.44 -0.32 -15.28 16 9 H 0.07 2.27 7.98 -52.49 -0.42 1.85 16 10 C 0.08 2.44 5.47 -17.82 -0.10 2.34 16 11 N -0.89 -27.40 13.96 55.43 0.77 -26.62 16 12 Si 0.90 23.53 26.18 -169.99 -4.45 19.09 16 13 H -0.28 -7.18 7.11 56.52 0.40 -6.77 16 14 H -0.31 -7.92 7.11 56.52 0.40 -7.52 16 15 H -0.27 -6.92 6.54 56.52 0.37 -6.55 16 16 C -0.09 -1.92 6.21 -105.11 -0.65 -2.58 16 17 C 0.11 1.86 6.81 -83.99 -0.57 1.29 16 18 C -0.14 -1.94 9.95 -39.44 -0.39 -2.33 16 19 C -0.09 -1.27 10.01 -39.55 -0.40 -1.66 16 20 C -0.16 -2.45 9.81 -39.55 -0.39 -2.84 16 21 C 0.03 0.56 6.35 -39.21 -0.25 0.31 16 22 Cl -0.05 -1.06 26.87 -51.86 -1.39 -2.45 16 23 H 0.06 0.60 8.14 -51.93 -0.42 0.18 16 24 H 0.07 0.63 8.10 -51.93 -0.42 0.20 16 25 H 0.08 0.66 8.13 -51.93 -0.42 0.24 16 26 H 0.17 2.46 7.39 -52.49 -0.39 2.07 16 27 H 0.36 6.97 8.09 45.56 0.37 7.34 16 28 H 0.26 7.63 8.31 -40.82 -0.34 7.29 16 29 H 0.12 1.28 8.06 -52.49 -0.42 0.85 16 30 H 0.13 1.26 8.06 -52.49 -0.42 0.83 16 31 H 0.13 1.70 8.06 -52.49 -0.42 1.28 16 LS Contribution 280.96 15.07 4.23 4.23 Total: -1.00 -33.54 280.96 -7.24 -40.79 By element: Atomic # 1 Polarization: 5.44 SS G_CDS: -2.43 Total: 3.00 kcal Atomic # 6 Polarization: -13.00 SS G_CDS: -3.20 Total: -16.21 kcal Atomic # 7 Polarization: -35.06 SS G_CDS: 0.39 Total: -34.68 kcal Atomic # 8 Polarization: -13.39 SS G_CDS: -0.38 Total: -13.77 kcal Atomic # 14 Polarization: 23.53 SS G_CDS: -4.45 Total: 19.09 kcal Atomic # 17 Polarization: -1.06 SS G_CDS: -1.39 Total: -2.45 kcal Total LS contribution 4.23 Total: 4.23 kcal Total: -33.54 -7.24 -40.79 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259625827.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 49.800 kcal (2) G-P(sol) polarization free energy of solvation -33.543 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.256 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.242 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.785 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.014 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds