Wall clock time and date at job start Mon Mar 30 2020 06:38:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.36866 * 125.06525 * 2 1 4 4 C 1.34232 * 109.92730 * 179.97438 * 3 2 1 5 5 C 1.50698 * 126.49658 * 180.02562 * 4 3 2 6 6 H 1.09001 * 109.46930 * 144.97777 * 5 4 3 7 7 O 1.42891 * 109.47283 * 24.97801 * 5 4 3 8 8 C 1.50699 * 109.47260 * 264.97149 * 5 4 3 9 9 H 1.08003 * 119.99669 * 0.02562 * 8 5 4 10 10 C 1.37876 * 120.00217 * 180.02562 * 8 5 4 11 11 N 1.31517 * 119.99838 * 0.02562 * 10 8 5 12 12 Si 1.86796 * 120.00128 * 180.02562 * 10 8 5 13 13 H 1.48500 * 109.46992 * 90.00184 * 12 10 8 14 14 H 1.48498 * 109.47029 * 210.00267 * 12 10 8 15 15 H 1.48499 * 109.47046 * 330.00384 * 12 10 8 16 16 C 1.46504 * 106.99893 * 0.02562 * 4 3 2 17 17 C 1.39626 * 134.01420 * 180.02562 * 16 4 3 18 18 C 1.36619 * 119.78690 * 179.97438 * 17 16 4 19 19 C 1.38929 * 120.51141 * 359.97438 * 18 17 16 20 20 Cl 1.73605 * 119.67727 * 179.97438 * 19 18 17 21 21 C 1.37849 * 120.64066 * 0.02562 * 19 18 17 22 22 C 1.37693 * 125.06641 * 179.70395 * 2 1 3 23 23 H 1.09002 * 109.47391 * 90.02064 * 1 2 3 24 24 H 1.09001 * 109.46813 * 330.02121 * 1 2 3 25 25 H 1.09004 * 109.47041 * 210.02248 * 1 2 3 26 26 H 1.07997 * 125.03649 * 359.96904 * 3 2 1 27 27 H 0.96695 * 114.00369 * 299.99739 * 7 5 4 28 28 H 0.97001 * 119.99935 * 180.02562 * 11 10 8 29 29 H 1.08002 * 120.10581 * 359.97438 * 17 16 4 30 30 H 1.07999 * 119.74244 * 180.02562 * 18 17 16 31 31 H 1.08004 * 120.11481 * 180.02562 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2513 1.1202 0.0000 4 6 3.5470 0.7697 0.0006 5 6 4.7286 1.7051 0.0013 6 1 5.5355 1.2706 0.5914 7 8 4.3439 2.9581 0.5702 8 6 5.2005 1.9195 -1.4138 9 1 4.6950 1.4279 -2.2319 10 6 6.2775 2.7431 -1.6640 11 7 6.8933 3.3413 -0.6677 12 14 6.8619 3.0094 -3.4181 13 1 6.1517 4.1741 -4.0050 14 1 8.3239 3.2695 -3.4186 15 1 6.5746 1.7964 -4.2251 16 6 3.5946 -0.6946 0.0003 17 6 4.6297 -1.6316 0.0011 18 6 4.3372 -2.9661 0.0011 19 6 3.0169 -3.3988 0.0009 20 17 2.6699 -5.0998 0.0002 21 6 1.9800 -2.4905 0.0001 22 6 2.2561 -1.1270 0.0058 23 1 -0.3634 -0.0004 -1.0277 24 1 -0.3633 0.8902 0.5135 25 1 -0.3633 -0.8898 0.5142 26 1 1.8837 2.1357 -0.0005 27 1 3.6285 3.4026 0.0952 28 1 7.6508 3.9211 -0.8438 29 1 5.6584 -1.3025 0.0017 30 1 5.1384 -3.6903 0.0021 31 1 0.9568 -2.8363 0.0004 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259625973.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:38:34 Heat of formation + Delta-G solvation = 2.526240 kcal Electronic energy + Delta-G solvation = -17357.891537 eV Core-core repulsion = 14437.651858 eV Total energy + Delta-G solvation = -2920.239680 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -40.93132 -37.28208 -35.85316 -35.66547 -32.29310 -32.13940 -30.15633 -28.38666 -27.53657 -25.37720 -22.76125 -22.23075 -21.09710 -18.98765 -17.03204 -16.62776 -16.21013 -15.52440 -15.04495 -14.59507 -14.32133 -13.96703 -13.71083 -13.15549 -13.08411 -12.85568 -12.42626 -12.31582 -12.03702 -11.36136 -11.17039 -11.08247 -10.97172 -10.87947 -10.58194 -10.48370 -10.19075 -9.35134 -9.02971 -8.58928 -8.32244 -7.76972 -7.02548 -5.99665 -4.18593 1.35296 1.85122 2.28220 3.18782 3.22841 3.28398 3.35765 3.40669 4.18496 4.42407 4.86705 5.00397 5.21446 5.22760 5.28300 5.31581 5.45324 5.53901 5.77506 5.91437 6.02487 6.22435 6.40041 6.54284 6.56280 6.85369 7.07091 7.23981 7.49685 7.67673 7.80946 7.89358 8.16848 8.84545 9.32592 9.57150 11.02650 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.021520 B = 0.005810 C = 0.005029 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1300.790349 B = 4818.144943 C = 5566.497124 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.084 3.916 2 N -0.491 5.491 3 C 0.024 3.976 4 C -0.136 4.136 5 C 0.289 3.711 6 H 0.067 0.933 7 O -0.560 6.560 8 C -0.558 4.558 9 H 0.056 0.944 10 C 0.079 3.921 11 N -0.861 5.861 12 Si 0.889 3.111 13 H -0.280 1.280 14 H -0.285 1.285 15 H -0.273 1.273 16 C -0.093 4.093 17 C -0.038 4.038 18 C -0.155 4.155 19 C -0.016 4.016 20 Cl -0.087 7.087 21 C -0.129 4.129 22 C 0.103 3.897 23 H 0.063 0.937 24 H 0.080 0.920 25 H 0.074 0.926 26 H 0.165 0.835 27 H 0.343 0.657 28 H 0.261 0.739 29 H 0.136 0.864 30 H 0.127 0.873 31 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.031 -9.630 1.490 14.719 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 N -0.176 5.176 3 C -0.097 4.097 4 C -0.143 4.143 5 C 0.231 3.769 6 H 0.084 0.916 7 O -0.362 6.362 8 C -0.596 4.596 9 H 0.075 0.925 10 C -0.127 4.127 11 N -0.497 5.497 12 Si 0.716 3.284 13 H -0.206 1.206 14 H -0.211 1.211 15 H -0.198 1.198 16 C -0.098 4.098 17 C -0.057 4.057 18 C -0.175 4.175 19 C -0.044 4.044 20 Cl -0.058 7.058 21 C -0.151 4.151 22 C -0.005 4.005 23 H 0.082 0.918 24 H 0.099 0.901 25 H 0.093 0.907 26 H 0.182 0.818 27 H 0.187 0.813 28 H 0.071 0.929 29 H 0.154 0.846 30 H 0.145 0.855 31 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -10.790 -9.754 1.986 14.681 hybrid contribution -0.287 0.109 -1.504 1.535 sum -11.077 -9.645 0.482 14.696 Atomic orbital electron populations 1.21826 0.77965 1.03594 1.02451 1.43647 1.05261 1.04159 1.64503 1.21429 0.90015 0.90376 1.07874 1.22066 0.96003 0.92315 1.03877 1.17873 0.86648 0.78537 0.93822 0.91576 1.86616 1.56891 1.36260 1.56475 1.21552 1.15433 1.30014 0.92567 0.92536 1.25039 0.95752 0.95081 0.96796 1.70072 1.20431 1.28646 1.30525 0.86667 0.77956 0.78620 0.85150 1.20576 1.21087 1.19797 1.19247 0.91521 0.93852 1.05193 1.20358 0.99237 0.90813 0.95249 1.20389 0.94188 0.96001 1.06916 1.20275 0.94163 0.83265 1.06668 1.98325 1.95556 1.14757 1.97202 1.19539 0.98246 0.88964 1.08324 1.17969 0.90619 0.87585 1.04311 0.91795 0.90148 0.90745 0.81814 0.81294 0.92924 0.84636 0.85464 0.86092 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.89 11.03 59.85 0.66 1.55 16 2 N -0.49 -7.79 3.18 -121.79 -0.39 -8.18 16 3 C 0.02 0.44 10.62 -16.72 -0.18 0.26 16 4 C -0.14 -2.91 5.39 -102.71 -0.55 -3.46 16 5 C 0.29 7.23 3.35 -29.04 -0.10 7.14 16 6 H 0.07 1.82 8.14 -51.93 -0.42 1.40 16 7 O -0.56 -13.94 12.52 -35.23 -0.44 -14.38 16 8 C -0.56 -15.03 8.75 -34.44 -0.30 -15.33 16 9 H 0.06 1.54 7.74 -52.48 -0.41 1.13 16 10 C 0.08 2.17 5.40 -17.82 -0.10 2.08 16 11 N -0.86 -24.87 12.84 55.43 0.71 -24.16 16 12 Si 0.89 20.97 29.54 -169.99 -5.02 15.94 16 13 H -0.28 -6.52 7.11 56.52 0.40 -6.12 16 14 H -0.29 -6.68 7.11 56.52 0.40 -6.27 16 15 H -0.27 -6.42 7.11 56.52 0.40 -6.01 16 16 C -0.09 -1.84 6.35 -105.13 -0.67 -2.51 16 17 C -0.04 -0.69 10.05 -39.65 -0.40 -1.09 16 18 C -0.15 -2.44 9.75 -39.91 -0.39 -2.83 16 19 C -0.02 -0.25 6.31 -39.47 -0.25 -0.50 16 20 Cl -0.09 -1.13 28.93 -51.86 -1.50 -2.63 16 21 C -0.13 -1.98 9.73 -39.40 -0.38 -2.36 16 22 C 0.10 1.79 6.81 -83.99 -0.57 1.22 16 23 H 0.06 0.61 8.14 -51.93 -0.42 0.19 16 24 H 0.08 0.70 8.14 -51.93 -0.42 0.28 16 25 H 0.07 0.68 8.10 -51.93 -0.42 0.25 16 26 H 0.16 2.51 7.40 -52.49 -0.39 2.12 16 27 H 0.34 7.35 8.09 45.56 0.37 7.72 16 28 H 0.26 7.15 8.31 -40.82 -0.34 6.81 16 29 H 0.14 2.44 8.06 -52.49 -0.42 2.01 16 30 H 0.13 1.72 8.06 -52.49 -0.42 1.30 16 31 H 0.12 1.56 8.06 -52.48 -0.42 1.13 16 LS Contribution 290.09 15.07 4.37 4.37 Total: -1.00 -30.91 290.09 -8.01 -38.92 By element: Atomic # 1 Polarization: 8.46 SS G_CDS: -2.52 Total: 5.95 kcal Atomic # 6 Polarization: -12.61 SS G_CDS: -3.22 Total: -15.84 kcal Atomic # 7 Polarization: -32.66 SS G_CDS: 0.32 Total: -32.34 kcal Atomic # 8 Polarization: -13.94 SS G_CDS: -0.44 Total: -14.38 kcal Atomic # 14 Polarization: 20.97 SS G_CDS: -5.02 Total: 15.94 kcal Atomic # 17 Polarization: -1.13 SS G_CDS: -1.50 Total: -2.63 kcal Total LS contribution 4.37 Total: 4.37 kcal Total: -30.91 -8.01 -38.92 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259625973.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.450 kcal (2) G-P(sol) polarization free energy of solvation -30.915 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.535 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.009 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.924 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.526 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds