Wall clock time and date at job start Mon Mar 30 2020 06:38:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.36862 * 125.06589 * 2 1 4 4 C 1.34221 * 109.92884 * 180.02562 * 3 2 1 5 5 C 1.50701 * 126.49813 * 180.02562 * 4 3 2 6 6 H 1.09005 * 109.46786 * 214.99946 * 5 4 3 7 7 O 1.42902 * 109.47081 * 334.99318 * 5 4 3 8 8 C 1.50693 * 109.47249 * 95.00085 * 5 4 3 9 9 H 1.08003 * 120.00162 * 359.97438 * 8 5 4 10 10 C 1.37876 * 120.00009 * 179.97438 * 8 5 4 11 11 N 1.31516 * 120.00293 * 359.97438 * 10 8 5 12 12 Si 1.86806 * 120.00022 * 179.97438 * 10 8 5 13 13 H 1.48498 * 109.47081 * 0.02562 * 12 10 8 14 14 H 1.48504 * 109.46924 * 120.00022 * 12 10 8 15 15 H 1.48502 * 109.47191 * 240.00080 * 12 10 8 16 16 C 1.46510 * 107.00188 * 359.97438 * 4 3 2 17 17 C 1.39634 * 134.01707 * 179.97438 * 16 4 3 18 18 C 1.36609 * 119.78414 * 180.02562 * 17 16 4 19 19 C 1.38943 * 120.51569 * 359.68264 * 18 17 16 20 20 Cl 1.73596 * 119.68368 * 180.30178 * 19 18 17 21 21 C 1.37853 * 120.63468 * 0.62249 * 19 18 17 22 22 C 1.37692 * 125.06697 * 180.02562 * 2 1 3 23 23 H 1.08998 * 109.46775 * 269.99989 * 1 2 3 24 24 H 1.08993 * 109.47502 * 29.99840 * 1 2 3 25 25 H 1.09005 * 109.46922 * 150.00397 * 1 2 3 26 26 H 1.08008 * 125.03471 * 359.96277 * 3 2 1 27 27 H 0.96697 * 113.99501 * 60.00898 * 7 5 4 28 28 H 0.96999 * 120.00156 * 179.97438 * 11 10 8 29 29 H 1.08000 * 120.10556 * 359.97438 * 17 16 4 30 30 H 1.07990 * 119.74233 * 180.02562 * 18 17 16 31 31 H 1.08002 * 120.11870 * 179.68252 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2513 1.1202 0.0000 4 6 3.5470 0.7697 -0.0006 5 6 4.7286 1.7051 -0.0002 6 1 5.5358 1.2709 -0.5902 7 8 4.3441 2.9585 -0.5688 8 6 5.1997 1.9188 1.4151 9 1 4.6938 1.4268 2.2328 10 6 6.2765 2.7423 1.6664 11 7 6.8929 3.3410 0.6707 12 14 6.8601 3.0078 3.4210 13 1 6.0049 2.2269 4.3505 14 1 8.2691 2.5561 3.5477 15 1 6.7706 4.4510 3.7594 16 6 3.5946 -0.6946 -0.0003 17 6 4.6298 -1.6317 -0.0011 18 6 4.3372 -2.9661 -0.0011 19 6 3.0169 -3.3988 0.0063 20 17 2.6698 -5.0997 0.0141 21 6 1.9800 -2.4906 0.0009 22 6 2.2561 -1.1270 -0.0005 23 1 -0.3633 0.0000 1.0277 24 1 -0.3634 0.8899 -0.5138 25 1 -0.3633 -0.8901 -0.5138 26 1 1.8837 2.1358 -0.0006 27 1 3.6284 3.4027 -0.0939 28 1 7.6503 3.9206 0.8475 29 1 5.6585 -1.3026 -0.0026 30 1 5.1384 -3.6902 -0.0013 31 1 0.9567 -2.8362 0.0015 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259625975.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:38:36 Heat of formation + Delta-G solvation = 2.501070 kcal Electronic energy + Delta-G solvation = -17358.119686 eV Core-core repulsion = 14437.878915 eV Total energy + Delta-G solvation = -2920.240771 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -40.93151 -37.28233 -35.85354 -35.66547 -32.29314 -32.14076 -30.15706 -28.38668 -27.53759 -25.37859 -22.76195 -22.23149 -21.09756 -18.98795 -17.03278 -16.62936 -16.21044 -15.52452 -15.04476 -14.59616 -14.32287 -13.96732 -13.71083 -13.15741 -13.08252 -12.85631 -12.42707 -12.31658 -12.03660 -11.36498 -11.17528 -11.08686 -10.94647 -10.90212 -10.58333 -10.48203 -10.17930 -9.35272 -9.02993 -8.58753 -8.32493 -7.76965 -7.02595 -5.99918 -4.18752 1.35269 1.85125 2.28227 3.18724 3.23090 3.27282 3.36081 3.41343 4.18459 4.42289 4.86751 5.00373 5.21380 5.22699 5.28303 5.31499 5.45356 5.53867 5.77483 5.91393 6.02421 6.22387 6.40042 6.54267 6.56221 6.85333 7.07066 7.23965 7.49656 7.67675 7.80994 7.89306 8.16738 8.84690 9.32508 9.57069 11.02423 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.021498 B = 0.005813 C = 0.005031 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1302.123238 B = 4815.434935 C = 5564.362830 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.084 3.916 2 N -0.491 5.491 3 C 0.025 3.975 4 C -0.136 4.136 5 C 0.289 3.711 6 H 0.067 0.933 7 O -0.560 6.560 8 C -0.557 4.557 9 H 0.057 0.943 10 C 0.079 3.921 11 N -0.861 5.861 12 Si 0.888 3.112 13 H -0.273 1.273 14 H -0.282 1.282 15 H -0.283 1.283 16 C -0.093 4.093 17 C -0.038 4.038 18 C -0.155 4.155 19 C -0.016 4.016 20 Cl -0.087 7.087 21 C -0.129 4.129 22 C 0.103 3.897 23 H 0.063 0.937 24 H 0.080 0.920 25 H 0.074 0.926 26 H 0.165 0.835 27 H 0.343 0.657 28 H 0.260 0.740 29 H 0.136 0.864 30 H 0.127 0.873 31 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.042 -9.637 -1.487 14.731 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 N -0.176 5.176 3 C -0.097 4.097 4 C -0.143 4.143 5 C 0.231 3.769 6 H 0.084 0.916 7 O -0.362 6.362 8 C -0.595 4.595 9 H 0.075 0.925 10 C -0.127 4.127 11 N -0.497 5.497 12 Si 0.716 3.284 13 H -0.197 1.197 14 H -0.208 1.208 15 H -0.209 1.209 16 C -0.098 4.098 17 C -0.057 4.057 18 C -0.175 4.175 19 C -0.044 4.044 20 Cl -0.058 7.058 21 C -0.151 4.151 22 C -0.005 4.005 23 H 0.082 0.918 24 H 0.099 0.901 25 H 0.093 0.907 26 H 0.182 0.818 27 H 0.187 0.813 28 H 0.070 0.930 29 H 0.154 0.846 30 H 0.145 0.855 31 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -10.807 -9.759 -1.982 14.696 hybrid contribution -0.272 0.106 1.500 1.529 sum -11.079 -9.653 -0.482 14.703 Atomic orbital electron populations 1.21825 0.77964 1.03598 1.02448 1.43647 1.05262 1.04158 1.64501 1.21426 0.90016 0.90378 1.07869 1.22063 0.96004 0.92314 1.03881 1.17880 0.86657 0.78533 0.93843 0.91582 1.86620 1.56871 1.36247 1.56500 1.21588 1.15385 1.29933 0.92581 0.92479 1.25042 0.95769 0.95073 0.96798 1.70080 1.20386 1.28716 1.30495 0.86618 0.78733 0.77950 0.85139 1.19712 1.20829 1.20904 1.19249 0.91521 0.93851 1.05200 1.20356 0.99232 0.90812 0.95255 1.20388 0.94186 0.96001 1.06922 1.20278 0.94163 0.83269 1.06663 1.98325 1.95553 1.14755 1.97199 1.19541 0.98246 0.88964 1.08322 1.17967 0.90620 0.87585 1.04307 0.91807 0.90137 0.90744 0.81813 0.81295 0.92978 0.84636 0.85466 0.86092 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.89 11.03 59.85 0.66 1.55 16 2 N -0.49 -7.79 3.18 -121.80 -0.39 -8.18 16 3 C 0.02 0.44 10.62 -16.72 -0.18 0.26 16 4 C -0.14 -2.91 5.39 -102.71 -0.55 -3.46 16 5 C 0.29 7.22 3.35 -29.04 -0.10 7.13 16 6 H 0.07 1.82 8.14 -51.93 -0.42 1.39 16 7 O -0.56 -13.94 12.52 -35.23 -0.44 -14.38 16 8 C -0.56 -15.00 8.75 -34.44 -0.30 -15.30 16 9 H 0.06 1.56 7.74 -52.48 -0.41 1.15 16 10 C 0.08 2.17 5.40 -17.82 -0.10 2.07 16 11 N -0.86 -24.87 12.84 55.43 0.71 -24.16 16 12 Si 0.89 20.96 29.54 -169.99 -5.02 15.94 16 13 H -0.27 -6.40 7.11 56.52 0.40 -6.00 16 14 H -0.28 -6.62 7.11 56.52 0.40 -6.22 16 15 H -0.28 -6.62 7.11 56.52 0.40 -6.21 16 16 C -0.09 -1.84 6.35 -105.13 -0.67 -2.51 16 17 C -0.04 -0.69 10.05 -39.65 -0.40 -1.09 16 18 C -0.15 -2.44 9.75 -39.91 -0.39 -2.83 16 19 C -0.02 -0.25 6.31 -39.46 -0.25 -0.50 16 20 Cl -0.09 -1.13 28.93 -51.86 -1.50 -2.63 16 21 C -0.13 -1.98 9.73 -39.39 -0.38 -2.36 16 22 C 0.10 1.79 6.81 -83.99 -0.57 1.22 16 23 H 0.06 0.61 8.14 -51.93 -0.42 0.19 16 24 H 0.08 0.70 8.13 -51.93 -0.42 0.28 16 25 H 0.07 0.68 8.10 -51.93 -0.42 0.25 16 26 H 0.16 2.51 7.40 -52.48 -0.39 2.12 16 27 H 0.34 7.35 8.09 45.56 0.37 7.72 16 28 H 0.26 7.12 8.31 -40.82 -0.34 6.78 16 29 H 0.14 2.43 8.06 -52.49 -0.42 2.01 16 30 H 0.13 1.72 8.06 -52.49 -0.42 1.30 16 31 H 0.12 1.56 8.06 -52.49 -0.42 1.13 16 LS Contribution 290.10 15.07 4.37 4.37 Total: -1.00 -30.95 290.10 -8.01 -38.96 By element: Atomic # 1 Polarization: 8.41 SS G_CDS: -2.52 Total: 5.90 kcal Atomic # 6 Polarization: -12.60 SS G_CDS: -3.23 Total: -15.82 kcal Atomic # 7 Polarization: -32.66 SS G_CDS: 0.32 Total: -32.33 kcal Atomic # 8 Polarization: -13.94 SS G_CDS: -0.44 Total: -14.38 kcal Atomic # 14 Polarization: 20.96 SS G_CDS: -5.02 Total: 15.94 kcal Atomic # 17 Polarization: -1.13 SS G_CDS: -1.50 Total: -2.63 kcal Total LS contribution 4.37 Total: 4.37 kcal Total: -30.95 -8.01 -38.96 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259625975.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.462 kcal (2) G-P(sol) polarization free energy of solvation -30.952 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.510 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.009 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.961 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.501 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds