Wall clock time and date at job start Mon Mar 30 2020 06:28:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.46484 * 126.49696 * 2 1 4 4 C 1.39671 * 134.01592 * 359.97438 * 3 2 1 5 5 C 1.36616 * 119.78262 * 180.28112 * 4 3 2 6 6 C 1.38827 * 120.53805 * 359.44232 * 5 4 3 7 7 C 1.37854 * 120.65192 * 0.55879 * 6 5 4 8 8 Cl 1.73602 * 120.12025 * 179.70344 * 7 6 5 9 9 C 1.39225 * 119.75490 * 359.72918 * 7 6 5 10 10 N 1.37726 * 133.50783 * 179.97438 * 9 7 6 11 11 H 0.97000 * 125.07063 * 359.97438 * 10 9 7 12 12 C 1.34245 * 126.49937 * 179.97438 * 2 1 3 13 13 C 1.50694 * 125.03665 * 359.97438 * 12 2 1 14 14 H 1.09003 * 109.47178 * 35.00470 * 13 12 2 15 15 O 1.42900 * 109.46971 * 155.00144 * 13 12 2 16 16 C 1.50699 * 109.47276 * 275.00166 * 13 12 2 17 17 H 1.07997 * 120.00065 * 0.02562 * 16 13 12 18 18 C 1.37881 * 120.00130 * 179.97438 * 16 13 12 19 19 N 1.31521 * 119.99769 * 0.02562 * 18 16 13 20 20 Si 1.86799 * 120.00040 * 179.97438 * 18 16 13 21 21 H 1.48504 * 109.47022 * 60.00250 * 20 18 16 22 22 H 1.48501 * 109.47192 * 180.02562 * 20 18 16 23 23 H 1.48497 * 109.47055 * 300.00080 * 20 18 16 24 24 H 1.09001 * 109.47490 * 90.02610 * 1 2 3 25 25 H 1.09002 * 109.46777 * 210.02694 * 1 2 3 26 26 H 1.09002 * 109.46924 * 330.02128 * 1 2 3 27 27 H 1.08002 * 120.10488 * 359.97438 * 4 3 2 28 28 H 1.08000 * 119.72709 * 179.72680 * 5 4 3 29 29 H 1.08001 * 119.67234 * 180.28987 * 6 5 4 30 30 H 0.96701 * 114.00006 * 60.00459 * 15 13 12 31 31 H 0.97001 * 119.99405 * 179.97438 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3783 1.1776 0.0000 4 6 2.1481 2.5552 -0.0004 5 6 3.2057 3.4199 -0.0061 6 6 4.5087 2.9408 0.0002 7 6 4.7590 1.5851 0.0007 8 17 6.3938 1.0011 0.0009 9 6 3.6959 0.6862 0.0006 10 7 3.6168 -0.6888 0.0005 11 1 4.3774 -1.2908 0.0003 12 6 2.3055 -1.0791 0.0005 13 6 1.8283 -2.5085 0.0017 14 1 0.9145 -2.5870 -0.5875 15 8 2.8354 -3.3474 -0.5674 16 6 1.5522 -2.9448 1.4175 17 1 1.7065 -2.2558 2.2346 18 6 1.1016 -4.2233 1.6695 19 7 0.9133 -5.0622 0.6742 20 14 0.7601 -4.7643 3.4245 21 1 -0.2859 -3.8921 4.0166 22 1 0.2896 -6.1728 3.4257 23 1 2.0054 -4.6582 4.2264 24 1 -0.3634 -0.0005 -1.0276 25 1 -0.3633 -0.8898 0.5143 26 1 -0.3633 0.8902 0.5135 27 1 1.1372 2.9355 -0.0013 28 1 3.0266 4.4849 -0.0109 29 1 5.3343 3.6370 0.0003 30 1 3.6780 -3.3276 -0.0933 31 1 0.5966 -5.9618 0.8516 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259657346.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:28:36 Heat of formation + Delta-G solvation = -15.441568 kcal Electronic energy + Delta-G solvation = -17478.158189 eV Core-core repulsion = 14557.139367 eV Total energy + Delta-G solvation = -2921.018822 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -40.97140 -37.32406 -36.22133 -35.23738 -32.64957 -32.23140 -29.73046 -29.28960 -27.21173 -25.71739 -23.45289 -21.96641 -20.77099 -18.75854 -17.59903 -17.12650 -16.17233 -15.45204 -14.75221 -14.46142 -14.37905 -14.12940 -13.74537 -13.07155 -12.78918 -12.61791 -12.05764 -11.97558 -11.87838 -11.56242 -11.22907 -11.20868 -11.00066 -10.99308 -10.93995 -10.63186 -10.31853 -9.51910 -9.03144 -8.79432 -8.61029 -7.80295 -7.07216 -6.17718 -4.39094 1.25965 1.81463 2.29399 3.17920 3.21561 3.26843 3.32080 3.52088 4.05348 4.28134 4.99951 5.06410 5.10897 5.35255 5.45370 5.55364 5.86372 5.98693 6.03403 6.07057 6.21836 6.32638 6.37715 6.55819 6.64211 6.84680 6.95314 7.08717 7.39203 7.62954 7.69971 7.85174 7.99472 8.62149 9.02626 9.36672 10.84618 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.023550 B = 0.006016 C = 0.005402 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1188.689590 B = 4653.218456 C = 5182.022110 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 C -0.196 4.196 3 C -0.082 4.082 4 C -0.070 4.070 5 C -0.146 4.146 6 C -0.106 4.106 7 C -0.041 4.041 8 Cl -0.087 7.087 9 C 0.095 3.905 10 N -0.578 5.578 11 H 0.414 0.586 12 C 0.114 3.886 13 C 0.281 3.719 14 H 0.087 0.913 15 O -0.559 6.559 16 C -0.568 4.568 17 H 0.061 0.939 18 C 0.082 3.918 19 N -0.856 5.856 20 Si 0.896 3.104 21 H -0.273 1.273 22 H -0.285 1.285 23 H -0.276 1.276 24 H 0.053 0.947 25 H 0.076 0.924 26 H 0.052 0.948 27 H 0.123 0.877 28 H 0.125 0.875 29 H 0.128 0.872 30 H 0.343 0.657 31 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.494 12.605 -1.209 13.437 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.128 4.128 2 C -0.202 4.202 3 C -0.088 4.088 4 C -0.088 4.088 5 C -0.166 4.166 6 C -0.126 4.126 7 C -0.071 4.071 8 Cl -0.059 7.059 9 C -0.015 4.015 10 N -0.180 5.180 11 H 0.251 0.749 12 C 0.005 3.995 13 C 0.223 3.777 14 H 0.105 0.895 15 O -0.360 6.360 16 C -0.606 4.606 17 H 0.079 0.921 18 C -0.125 4.125 19 N -0.491 5.491 20 Si 0.723 3.277 21 H -0.198 1.198 22 H -0.210 1.210 23 H -0.201 1.201 24 H 0.072 0.928 25 H 0.095 0.905 26 H 0.071 0.929 27 H 0.141 0.859 28 H 0.142 0.858 29 H 0.146 0.854 30 H 0.187 0.813 31 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges 4.160 12.104 -1.715 12.913 hybrid contribution 0.900 -0.462 1.439 1.759 sum 5.060 11.641 -0.276 12.696 Atomic orbital electron populations 1.20029 0.89508 1.02359 1.00886 1.19869 0.95320 0.89185 1.15807 1.19148 0.91241 0.93387 1.05014 1.20301 0.99082 0.90957 0.98509 1.20421 0.91499 0.99365 1.05338 1.20567 0.97644 0.91901 1.02459 1.19835 0.82616 0.92704 1.11904 1.98335 1.21057 1.89165 1.97332 1.17840 0.93976 0.84024 1.05616 1.41689 1.08139 1.04061 1.64111 0.74870 1.22231 0.81418 0.99564 0.96313 1.18466 0.87897 0.76186 0.95182 0.89533 1.86676 1.23638 1.69429 1.56306 1.21410 1.48891 0.98452 0.91805 0.92119 1.25031 0.93778 0.96378 0.97323 1.70053 1.42088 1.06037 1.30897 0.86608 0.78962 0.77727 0.84423 1.19845 1.21024 1.20102 0.92830 0.90486 0.92892 0.85938 0.85756 0.85418 0.81297 0.92519 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -1.22 10.02 36.01 0.36 -0.86 16 2 C -0.20 -3.85 6.31 -102.71 -0.65 -4.50 16 3 C -0.08 -1.48 6.35 -105.14 -0.67 -2.15 16 4 C -0.07 -1.03 10.05 -39.63 -0.40 -1.43 16 5 C -0.15 -1.89 9.97 -39.95 -0.40 -2.29 16 6 C -0.11 -1.43 9.80 -39.50 -0.39 -1.82 16 7 C -0.04 -0.65 6.34 -39.36 -0.25 -0.90 16 8 Cl -0.09 -1.23 28.97 -51.86 -1.50 -2.74 16 9 C 0.09 1.70 7.07 -83.95 -0.59 1.10 16 10 N -0.58 -10.82 5.92 -6.94 -0.04 -10.86 16 11 H 0.41 7.03 8.11 -40.82 -0.33 6.70 16 12 C 0.11 2.39 6.00 -81.78 -0.49 1.90 16 13 C 0.28 6.73 2.77 -29.04 -0.08 6.65 16 14 H 0.09 2.24 7.92 -51.93 -0.41 1.83 16 15 O -0.56 -13.47 12.62 -35.23 -0.44 -13.91 16 16 C -0.57 -14.67 8.75 -34.44 -0.30 -14.98 16 17 H 0.06 1.59 7.74 -52.49 -0.41 1.18 16 18 C 0.08 2.17 5.40 -17.82 -0.10 2.07 16 19 N -0.86 -23.81 12.84 55.43 0.71 -23.10 16 20 Si 0.90 20.37 29.54 -169.99 -5.02 15.35 16 21 H -0.27 -6.14 7.11 56.52 0.40 -5.74 16 22 H -0.28 -6.42 7.11 56.52 0.40 -6.02 16 23 H -0.28 -6.25 7.11 56.52 0.40 -5.85 16 24 H 0.05 0.85 8.14 -51.93 -0.42 0.42 16 25 H 0.08 1.45 7.81 -51.93 -0.41 1.04 16 26 H 0.05 0.79 8.14 -51.93 -0.42 0.37 16 27 H 0.12 1.53 8.06 -52.49 -0.42 1.11 16 28 H 0.12 1.21 8.06 -52.49 -0.42 0.79 16 29 H 0.13 1.40 8.06 -52.49 -0.42 0.98 16 30 H 0.34 7.21 8.18 45.56 0.37 7.58 16 31 H 0.26 7.02 8.31 -40.82 -0.34 6.68 16 LS Contribution 288.56 15.07 4.35 4.35 Total: -1.00 -28.71 288.56 -8.33 -37.04 By element: Atomic # 1 Polarization: 13.50 SS G_CDS: -2.43 Total: 11.07 kcal Atomic # 6 Polarization: -13.24 SS G_CDS: -3.95 Total: -17.19 kcal Atomic # 7 Polarization: -34.63 SS G_CDS: 0.67 Total: -33.96 kcal Atomic # 8 Polarization: -13.47 SS G_CDS: -0.44 Total: -13.91 kcal Atomic # 14 Polarization: 20.37 SS G_CDS: -5.02 Total: 15.35 kcal Atomic # 17 Polarization: -1.23 SS G_CDS: -1.50 Total: -2.74 kcal Total LS contribution 4.35 Total: 4.35 kcal Total: -28.71 -8.33 -37.04 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259657346.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.598 kcal (2) G-P(sol) polarization free energy of solvation -28.710 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.112 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.330 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.039 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.442 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds