Wall clock time and date at job start Mon Mar 30 2020 06:38:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.36814 * 125.06751 * 2 1 4 4 C 1.34243 * 109.92385 * 180.20518 * 3 2 1 5 5 C 1.50700 * 126.49559 * 179.83644 * 4 3 2 6 6 H 1.09004 * 109.47210 * 144.68992 * 5 4 3 7 7 O 1.42903 * 109.47593 * 24.68690 * 5 4 3 8 8 C 1.50702 * 109.46869 * 264.68699 * 5 4 3 9 9 H 1.08002 * 120.00299 * 0.02562 * 8 5 4 10 10 C 1.37884 * 119.99942 * 179.72213 * 8 5 4 11 11 N 1.31514 * 119.99698 * 0.28408 * 10 8 5 12 12 Si 1.86794 * 119.99837 * 180.27476 * 10 8 5 13 13 H 1.48504 * 109.47196 * 60.00645 * 12 10 8 14 14 H 1.48504 * 109.46887 * 180.02562 * 12 10 8 15 15 H 1.48502 * 109.47679 * 300.00280 * 12 10 8 16 16 C 1.46479 * 107.00185 * 359.57392 * 4 3 2 17 17 C 1.39665 * 134.02006 * 180.29927 * 16 4 3 18 18 C 1.36613 * 119.78994 * 179.97438 * 17 16 4 19 19 C 1.38829 * 120.53785 * 0.02562 * 18 17 16 20 20 C 1.37851 * 120.64911 * 359.97438 * 19 18 17 21 21 Cl 1.73596 * 120.12097 * 180.02562 * 20 19 18 22 22 C 1.37721 * 125.06422 * 179.72687 * 2 1 3 23 23 H 1.09000 * 109.47099 * 270.27373 * 1 2 3 24 24 H 1.09004 * 109.47065 * 30.27260 * 1 2 3 25 25 H 1.08999 * 109.47460 * 150.27178 * 1 2 3 26 26 H 1.08004 * 125.03666 * 0.06189 * 3 2 1 27 27 H 0.96697 * 113.99557 * 300.00823 * 7 5 4 28 28 H 0.97005 * 119.99651 * 179.97438 * 11 10 8 29 29 H 1.08005 * 120.10432 * 359.97438 * 17 16 4 30 30 H 1.07998 * 119.73337 * 180.02562 * 18 17 16 31 31 H 1.07998 * 119.67734 * 179.97438 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2511 1.1198 0.0000 4 6 3.5469 0.7691 -0.0045 5 6 4.7285 1.7044 -0.0095 6 1 5.5361 1.2727 0.5818 7 8 4.3445 2.9603 0.5537 8 6 5.1988 1.9119 -1.4262 9 1 4.6924 1.4165 -2.2414 10 6 6.2717 2.7393 -1.6821 11 7 6.8881 3.3428 -0.6895 12 14 6.8498 3.0026 -3.4388 13 1 5.7457 3.5885 -4.2407 14 1 8.0112 3.9280 -3.4442 15 1 7.2524 1.7003 -4.0280 16 6 3.5944 -0.6949 0.0027 17 6 4.6297 -1.6323 0.0077 18 6 4.3370 -2.9667 0.0148 19 6 3.0179 -3.3996 0.0165 20 6 1.9805 -2.4919 0.0116 21 17 0.3361 -3.0483 0.0145 22 6 2.2562 -1.1272 0.0054 23 1 -0.3633 0.0049 1.0277 24 1 -0.3633 0.8876 -0.5181 25 1 -0.3634 -0.8924 -0.5096 26 1 1.8835 2.1354 0.0010 27 1 3.6285 3.4024 0.0773 28 1 7.6432 3.9246 -0.8695 29 1 5.6584 -1.3033 0.0061 30 1 5.1383 -3.6908 0.0191 31 1 2.8024 -4.4578 0.0216 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259702957.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:38:37 Heat of formation + Delta-G solvation = 4.396029 kcal Electronic energy + Delta-G solvation = -17530.129911 eV Core-core repulsion = 14609.971312 eV Total energy + Delta-G solvation = -2920.158599 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -40.93055 -37.09657 -36.18546 -35.66409 -32.17717 -32.12573 -29.91921 -28.63970 -27.48957 -25.31235 -22.71589 -22.20613 -21.20653 -18.99604 -17.01703 -16.58798 -16.18247 -15.34754 -15.08988 -14.58521 -14.34674 -14.05290 -13.94757 -13.05529 -13.03096 -12.88661 -12.49886 -12.14050 -11.92199 -11.39489 -11.20632 -10.98882 -10.93007 -10.82611 -10.74163 -10.45816 -10.19850 -9.32083 -8.93889 -8.56131 -8.31614 -7.83486 -6.98720 -5.99081 -4.18038 1.34590 1.88922 2.28906 3.15769 3.22829 3.30181 3.35241 3.39411 4.19269 4.42621 4.92174 4.98634 5.23027 5.27530 5.33150 5.33624 5.55751 5.64676 5.72916 5.93899 6.14503 6.17362 6.37373 6.55178 6.62529 6.90701 7.12443 7.21975 7.48275 7.68714 7.81049 7.89688 8.17394 8.84808 9.33086 9.57571 11.03171 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.026273 B = 0.005910 C = 0.005416 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1065.472768 B = 4736.226590 C = 5168.579974 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.075 3.925 2 N -0.485 5.485 3 C 0.024 3.976 4 C -0.135 4.135 5 C 0.290 3.710 6 H 0.067 0.933 7 O -0.560 6.560 8 C -0.558 4.558 9 H 0.056 0.944 10 C 0.079 3.921 11 N -0.861 5.861 12 Si 0.890 3.110 13 H -0.277 1.277 14 H -0.286 1.286 15 H -0.276 1.276 16 C -0.087 4.087 17 C -0.043 4.043 18 C -0.156 4.156 19 C -0.093 4.093 20 C -0.053 4.053 21 Cl -0.093 7.093 22 C 0.102 3.898 23 H 0.063 0.937 24 H 0.078 0.922 25 H 0.083 0.917 26 H 0.165 0.835 27 H 0.344 0.656 28 H 0.261 0.739 29 H 0.132 0.868 30 H 0.127 0.873 31 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.828 -9.805 1.407 14.675 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 N -0.169 5.169 3 C -0.098 4.098 4 C -0.142 4.142 5 C 0.232 3.768 6 H 0.084 0.916 7 O -0.362 6.362 8 C -0.596 4.596 9 H 0.074 0.926 10 C -0.127 4.127 11 N -0.497 5.497 12 Si 0.717 3.283 13 H -0.202 1.202 14 H -0.212 1.212 15 H -0.201 1.201 16 C -0.093 4.093 17 C -0.062 4.062 18 C -0.176 4.176 19 C -0.113 4.113 20 C -0.082 4.082 21 Cl -0.064 7.064 22 C -0.006 4.006 23 H 0.081 0.919 24 H 0.096 0.904 25 H 0.101 0.899 26 H 0.182 0.818 27 H 0.187 0.813 28 H 0.071 0.929 29 H 0.150 0.850 30 H 0.144 0.856 31 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -10.709 -9.810 1.903 14.647 hybrid contribution -0.410 0.205 -1.486 1.555 sum -11.119 -9.605 0.417 14.699 Atomic orbital electron populations 1.22069 0.77818 1.04161 1.02601 1.43640 1.05372 1.03996 1.63849 1.21436 0.90021 0.90428 1.07887 1.22041 0.96006 0.92132 1.04001 1.17862 0.86596 0.78462 0.93858 0.91582 1.86618 1.56839 1.36091 1.56682 1.21518 1.15667 1.29871 0.92579 0.92577 1.25039 0.95756 0.95049 0.96814 1.70063 1.20481 1.28421 1.30698 0.86723 0.78266 0.78148 0.85172 1.20214 1.21198 1.20113 1.19123 0.90635 0.93828 1.05704 1.20542 0.99123 0.91667 0.94843 1.20473 0.95292 0.95667 1.06162 1.20606 0.91310 0.98206 1.01189 1.19717 0.84688 0.89986 1.13817 1.98296 1.21069 1.89568 1.97488 1.17868 0.91040 0.86517 1.05206 0.91863 0.90350 0.89862 0.81762 0.81269 0.92870 0.84976 0.85553 0.85450 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.93 10.49 59.85 0.63 1.56 16 2 N -0.48 -8.14 3.18 -121.78 -0.39 -8.53 16 3 C 0.02 0.44 10.62 -16.74 -0.18 0.26 16 4 C -0.14 -2.92 5.39 -102.71 -0.55 -3.48 16 5 C 0.29 7.29 3.35 -29.03 -0.10 7.20 16 6 H 0.07 1.82 8.14 -51.93 -0.42 1.40 16 7 O -0.56 -14.03 12.51 -35.23 -0.44 -14.47 16 8 C -0.56 -15.09 8.75 -34.44 -0.30 -15.39 16 9 H 0.06 1.53 7.74 -52.49 -0.41 1.12 16 10 C 0.08 2.18 5.40 -17.82 -0.10 2.08 16 11 N -0.86 -24.89 12.83 55.43 0.71 -24.18 16 12 Si 0.89 21.00 29.54 -169.99 -5.02 15.98 16 13 H -0.28 -6.46 7.11 56.52 0.40 -6.06 16 14 H -0.29 -6.69 7.11 56.52 0.40 -6.29 16 15 H -0.28 -6.45 7.11 56.52 0.40 -6.05 16 16 C -0.09 -1.75 6.35 -105.14 -0.67 -2.42 16 17 C -0.04 -0.78 10.05 -39.64 -0.40 -1.18 16 18 C -0.16 -2.33 9.97 -39.95 -0.40 -2.72 16 19 C -0.09 -1.35 9.80 -39.50 -0.39 -1.73 16 20 C -0.05 -0.84 6.33 -39.36 -0.25 -1.09 16 21 Cl -0.09 -1.23 26.06 -51.86 -1.35 -2.58 16 22 C 0.10 1.85 6.78 -83.95 -0.57 1.28 16 23 H 0.06 0.70 8.14 -51.93 -0.42 0.28 16 24 H 0.08 0.81 8.14 -51.93 -0.42 0.38 16 25 H 0.08 0.99 5.72 -51.93 -0.30 0.69 16 26 H 0.17 2.60 7.39 -52.48 -0.39 2.21 16 27 H 0.34 7.43 8.09 45.56 0.37 7.80 16 28 H 0.26 7.19 8.31 -40.82 -0.34 6.85 16 29 H 0.13 2.35 8.06 -52.48 -0.42 1.93 16 30 H 0.13 1.50 8.06 -52.49 -0.42 1.08 16 31 H 0.13 1.48 8.06 -52.49 -0.42 1.06 16 LS Contribution 284.56 15.07 4.29 4.29 Total: -1.00 -30.85 284.56 -7.86 -38.72 By element: Atomic # 1 Polarization: 8.80 SS G_CDS: -2.39 Total: 6.40 kcal Atomic # 6 Polarization: -12.36 SS G_CDS: -3.27 Total: -15.63 kcal Atomic # 7 Polarization: -33.03 SS G_CDS: 0.32 Total: -32.71 kcal Atomic # 8 Polarization: -14.03 SS G_CDS: -0.44 Total: -14.47 kcal Atomic # 14 Polarization: 21.00 SS G_CDS: -5.02 Total: 15.98 kcal Atomic # 17 Polarization: -1.23 SS G_CDS: -1.35 Total: -2.58 kcal Total LS contribution 4.29 Total: 4.29 kcal Total: -30.85 -7.86 -38.72 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259702957.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.113 kcal (2) G-P(sol) polarization free energy of solvation -30.854 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.259 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.863 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.717 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.396 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds