Wall clock time and date at job start Mon Mar 30 2020 06:38:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.37685 * 125.06830 * 2 1 4 4 C 1.39125 * 133.49173 * 359.94454 * 3 2 1 5 5 C 1.37852 * 119.77196 * 180.33988 * 4 3 2 6 6 Cl 1.73595 * 119.68507 * 180.02562 * 5 4 3 7 7 C 1.38936 * 120.63762 * 0.02562 * 5 4 3 8 8 C 1.36620 * 120.51597 * 0.03183 * 7 5 4 9 9 C 1.39637 * 119.78101 * 359.93505 * 8 7 5 10 10 C 1.46507 * 134.01439 * 180.02562 * 9 8 7 11 11 C 1.34214 * 107.00160 * 180.02562 * 10 9 8 12 12 C 1.50703 * 125.03626 * 180.02562 * 11 10 9 13 13 H 1.09003 * 109.47247 * 155.23152 * 12 11 10 14 14 O 1.42904 * 109.47200 * 35.23244 * 12 11 10 15 15 C 1.50701 * 109.47268 * 275.23406 * 12 11 10 16 16 H 1.07999 * 119.99496 * 359.97438 * 15 12 11 17 17 C 1.37868 * 120.00183 * 179.97438 * 15 12 11 18 18 N 1.31516 * 120.00210 * 180.02562 * 17 15 12 19 19 Si 1.86805 * 120.00245 * 0.02562 * 17 15 12 20 20 H 1.48492 * 109.47024 * 269.99884 * 19 17 15 21 21 H 1.48507 * 109.46680 * 30.00007 * 19 17 15 22 22 H 1.48498 * 109.47232 * 149.99693 * 19 17 15 23 23 H 1.08997 * 109.46919 * 265.06119 * 1 2 3 24 24 H 1.09010 * 109.46765 * 25.05709 * 1 2 3 25 25 H 1.09000 * 109.47522 * 145.05579 * 1 2 3 26 26 H 1.07999 * 120.11476 * 0.36051 * 4 3 2 27 27 H 1.07999 * 119.74573 * 180.02562 * 7 5 4 28 28 H 1.07998 * 120.11129 * 180.02562 * 8 7 5 29 29 H 1.08005 * 126.49423 * 0.05867 * 10 9 8 30 30 H 0.96697 * 114.00154 * 294.94081 * 14 12 11 31 31 H 0.97003 * 120.00319 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2561 1.1269 0.0000 4 6 1.9801 2.4905 -0.0010 5 6 3.0172 3.3987 -0.0078 6 17 2.6703 5.0997 -0.0083 7 6 4.3374 2.9659 -0.0142 8 6 4.6299 1.6314 -0.0145 9 6 3.5946 0.6944 -0.0070 10 6 3.5469 -0.7699 -0.0046 11 6 2.2513 -1.1202 0.0030 12 6 1.7383 -2.5373 0.0085 13 1 0.7395 -2.5604 0.4445 14 8 2.6151 -3.3583 0.7826 15 6 1.6815 -3.0564 -1.4052 16 1 1.9861 -2.4234 -2.2255 17 6 1.2409 -4.3394 -1.6512 18 7 1.1918 -4.7927 -2.8848 19 14 0.7135 -5.4341 -0.2324 20 1 1.8854 -6.1981 0.2655 21 1 0.1676 -4.5944 0.8642 22 1 -0.3321 -6.3798 -0.6990 23 1 -0.3633 -0.0885 1.0238 24 1 -0.3633 0.9310 -0.4353 25 1 -0.3634 -0.8424 -0.5886 26 1 0.9570 2.8363 0.0039 27 1 5.1386 3.6900 -0.0190 28 1 5.6585 1.3022 -0.0191 29 1 4.3937 -1.4402 -0.0078 30 1 3.5027 -3.4471 0.4093 31 1 0.8814 -5.6952 -3.0580 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259743687.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:38:20 Heat of formation + Delta-G solvation = 1.524879 kcal Electronic energy + Delta-G solvation = -17375.710656 eV Core-core repulsion = 14455.427554 eV Total energy + Delta-G solvation = -2920.283102 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -41.05508 -37.56721 -36.30536 -35.58282 -32.53068 -32.34861 -30.32131 -29.26596 -27.07860 -25.84300 -23.34817 -21.51334 -21.25920 -19.24984 -17.68320 -16.89460 -16.20187 -15.64193 -15.12257 -14.90876 -14.24563 -14.04007 -13.86657 -13.29849 -13.14489 -13.03901 -12.69716 -12.13247 -12.02931 -11.93247 -11.60789 -11.26702 -11.13054 -10.96740 -10.68042 -10.44387 -10.10289 -9.51805 -9.31761 -8.97750 -8.85400 -7.75698 -7.22246 -6.32244 -4.47919 1.25011 1.72716 2.21706 3.16183 3.21283 3.29811 3.35544 3.45326 4.03804 4.30330 4.85489 4.96106 5.04627 5.14928 5.28786 5.44443 5.49269 5.61190 5.66820 5.71441 5.83965 5.92710 6.22604 6.29779 6.41683 6.63896 6.67690 6.95341 7.22415 7.27829 7.59713 7.66152 8.08069 8.59071 8.76865 9.26402 10.77079 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.039815 B = 0.004820 C = 0.004644 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 703.086375 B = 5807.795704 C = 6027.294174 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.074 3.926 2 N -0.475 5.475 3 C 0.097 3.903 4 C -0.116 4.116 5 C -0.027 4.027 6 Cl -0.085 7.085 7 C -0.146 4.146 8 C -0.062 4.062 9 C -0.095 4.095 10 C -0.219 4.219 11 C 0.119 3.881 12 C 0.247 3.753 13 H 0.071 0.929 14 O -0.574 6.574 15 C -0.561 4.561 16 H 0.079 0.921 17 C 0.087 3.913 18 N -0.881 5.881 19 Si 0.910 3.090 20 H -0.274 1.274 21 H -0.268 1.268 22 H -0.301 1.301 23 H 0.066 0.934 24 H 0.076 0.924 25 H 0.095 0.905 26 H 0.124 0.876 27 H 0.126 0.874 28 H 0.128 0.872 29 H 0.145 0.855 30 H 0.370 0.630 31 H 0.269 0.731 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.020 12.745 6.289 14.355 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 N -0.158 5.158 3 C -0.010 4.010 4 C -0.137 4.137 5 C -0.054 4.054 6 Cl -0.057 7.057 7 C -0.166 4.166 8 C -0.081 4.081 9 C -0.100 4.100 10 C -0.242 4.242 11 C 0.011 3.989 12 C 0.189 3.811 13 H 0.088 0.912 14 O -0.380 6.380 15 C -0.598 4.598 16 H 0.097 0.903 17 C -0.119 4.119 18 N -0.517 5.517 19 Si 0.739 3.261 20 H -0.200 1.200 21 H -0.193 1.193 22 H -0.229 1.229 23 H 0.084 0.916 24 H 0.095 0.905 25 H 0.114 0.886 26 H 0.142 0.858 27 H 0.144 0.856 28 H 0.146 0.854 29 H 0.163 0.837 30 H 0.218 0.782 31 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges 1.060 12.649 6.549 14.283 hybrid contribution 0.037 -0.309 0.099 0.327 sum 1.097 12.339 6.648 14.059 Atomic orbital electron populations 1.21982 0.77354 1.04542 1.02862 1.43769 1.05940 1.03670 1.62459 1.17976 0.90617 0.87651 1.04729 1.19641 0.98550 0.88986 1.06536 1.20218 0.94071 0.83452 1.07669 1.98329 1.95567 1.14517 1.97239 1.20345 0.94239 0.95885 1.06120 1.20142 0.98239 0.91086 0.98628 1.19339 0.91841 0.94122 1.04692 1.21233 0.95757 0.91672 1.15541 1.21830 0.90364 0.89961 0.96755 1.18603 0.89873 0.79814 0.92855 0.91181 1.86425 1.26547 1.70514 1.54488 1.21321 1.47590 1.00115 0.90777 0.90287 1.25002 0.93221 0.97709 0.95988 1.69929 1.44534 1.17651 1.19584 0.86309 0.78240 0.79866 0.81700 1.19979 1.19312 1.22920 0.91587 0.90478 0.88640 0.85805 0.85565 0.85430 0.83704 0.78244 0.92092 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 1.09 10.48 59.85 0.63 1.72 16 2 N -0.47 -8.67 3.18 -117.19 -0.37 -9.04 16 3 C 0.10 1.71 6.80 -83.99 -0.57 1.14 16 4 C -0.12 -1.75 9.65 -39.39 -0.38 -2.13 16 5 C -0.03 -0.38 6.31 -39.46 -0.25 -0.63 16 6 Cl -0.09 -1.05 28.93 -51.86 -1.50 -2.55 16 7 C -0.15 -1.99 9.75 -39.91 -0.39 -2.38 16 8 C -0.06 -0.92 10.05 -39.64 -0.40 -1.32 16 9 C -0.09 -1.67 6.37 -105.13 -0.67 -2.34 16 10 C -0.22 -4.15 10.41 -37.67 -0.39 -4.54 16 11 C 0.12 2.41 5.85 -81.76 -0.48 1.93 16 12 C 0.25 5.50 2.35 -29.03 -0.07 5.43 16 13 H 0.07 1.57 6.51 -51.93 -0.34 1.24 16 14 O -0.57 -12.32 10.85 -35.23 -0.38 -12.70 16 15 C -0.56 -14.62 9.28 -34.44 -0.32 -14.94 16 16 H 0.08 2.30 7.98 -52.49 -0.42 1.88 16 17 C 0.09 2.35 5.47 -17.82 -0.10 2.25 16 18 N -0.88 -25.34 13.96 55.43 0.77 -24.56 16 19 Si 0.91 21.51 26.18 -169.99 -4.45 17.06 16 20 H -0.27 -6.48 7.11 56.52 0.40 -6.08 16 21 H -0.27 -6.22 6.54 56.52 0.37 -5.85 16 22 H -0.30 -7.10 7.11 56.52 0.40 -6.70 16 23 H 0.07 0.85 8.14 -51.93 -0.42 0.42 16 24 H 0.08 0.93 7.85 -51.92 -0.41 0.53 16 25 H 0.09 1.49 7.66 -51.93 -0.40 1.10 16 26 H 0.12 1.64 7.91 -52.49 -0.42 1.22 16 27 H 0.13 1.42 8.06 -52.49 -0.42 0.99 16 28 H 0.13 1.56 8.06 -52.49 -0.42 1.14 16 29 H 0.15 2.49 7.61 -52.48 -0.40 2.09 16 30 H 0.37 6.95 8.27 45.56 0.38 7.33 16 31 H 0.27 7.25 8.31 -40.82 -0.34 6.91 16 LS Contribution 283.00 15.07 4.26 4.26 Total: -1.00 -29.66 283.00 -7.49 -37.15 By element: Atomic # 1 Polarization: 8.65 SS G_CDS: -2.44 Total: 6.22 kcal Atomic # 6 Polarization: -12.45 SS G_CDS: -3.39 Total: -15.83 kcal Atomic # 7 Polarization: -34.00 SS G_CDS: 0.40 Total: -33.60 kcal Atomic # 8 Polarization: -12.32 SS G_CDS: -0.38 Total: -12.70 kcal Atomic # 14 Polarization: 21.51 SS G_CDS: -4.45 Total: 17.06 kcal Atomic # 17 Polarization: -1.05 SS G_CDS: -1.50 Total: -2.55 kcal Total LS contribution 4.26 Total: 4.26 kcal Total: -29.66 -7.49 -37.15 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259743687.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.677 kcal (2) G-P(sol) polarization free energy of solvation -29.664 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.014 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.489 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.153 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.525 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds