Wall clock time and date at job start Mon Mar 30 2020 06:38:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.37699 * 125.06542 * 2 1 4 4 C 1.39120 * 133.49109 * 0.08690 * 3 2 1 5 5 C 1.37847 * 119.76874 * 180.02562 * 4 3 2 6 6 Cl 1.73602 * 119.68310 * 179.97438 * 5 4 3 7 7 C 1.38938 * 120.64084 * 359.88475 * 5 4 3 8 8 C 1.36621 * 120.51215 * 0.07825 * 7 5 4 9 9 C 1.39633 * 119.77869 * 359.97438 * 8 7 5 10 10 C 1.46510 * 134.00356 * 180.28738 * 9 8 7 11 11 C 1.34233 * 106.99709 * 180.10626 * 10 9 8 12 12 C 1.50698 * 125.03439 * 179.89723 * 11 10 9 13 13 H 1.09002 * 109.46875 * 204.69307 * 12 11 10 14 14 O 1.42898 * 109.46994 * 324.69418 * 12 11 10 15 15 C 1.50694 * 109.47166 * 84.69514 * 12 11 10 16 16 H 1.08000 * 120.00563 * 359.97438 * 15 12 11 17 17 C 1.37885 * 119.99902 * 179.97438 * 15 12 11 18 18 N 1.31516 * 119.99913 * 0.02562 * 17 15 12 19 19 Si 1.86805 * 119.99854 * 179.72538 * 17 15 12 20 20 H 1.48504 * 109.47032 * 0.02562 * 19 17 15 21 21 H 1.48497 * 109.46816 * 120.00323 * 19 17 15 22 22 H 1.48495 * 109.46630 * 240.00111 * 19 17 15 23 23 H 1.09003 * 109.46457 * 269.95645 * 1 2 3 24 24 H 1.09002 * 109.46975 * 29.95280 * 1 2 3 25 25 H 1.08995 * 109.46955 * 149.95358 * 1 2 3 26 26 H 1.08003 * 120.11647 * 359.94450 * 4 3 2 27 27 H 1.08002 * 119.74600 * 180.02562 * 7 5 4 28 28 H 1.07995 * 120.10473 * 179.97438 * 8 7 5 29 29 H 1.07996 * 126.50488 * 359.97438 * 10 9 8 30 30 H 0.96698 * 114.00284 * 60.00294 * 14 12 11 31 31 H 0.97001 * 119.99646 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2561 1.1271 0.0000 4 6 1.9801 2.4906 0.0015 5 6 3.0171 3.3988 0.0005 6 17 2.6701 5.0998 0.0017 7 6 4.3374 2.9661 0.0003 8 6 4.6299 1.6316 -0.0004 9 6 3.5946 0.6946 -0.0005 10 6 3.5471 -0.7697 0.0042 11 6 2.2513 -1.1202 -0.0010 12 6 1.7385 -2.5372 -0.0010 13 1 0.7387 -2.5618 -0.4347 14 8 2.6136 -3.3605 -0.7745 15 6 1.6848 -3.0521 1.4143 16 1 1.9918 -2.4169 2.2320 17 6 1.2438 -4.3341 1.6653 18 7 0.8704 -5.1078 0.6694 19 14 1.1845 -4.9749 3.4190 20 1 1.6597 -3.9186 4.3483 21 1 -0.2116 -5.3454 3.7636 22 1 2.0578 -6.1700 3.5389 23 1 -0.3632 -0.0008 1.0277 24 1 -0.3633 0.8904 -0.5131 25 1 -0.3633 -0.8895 -0.5145 26 1 0.9569 2.8364 0.0022 27 1 5.1386 3.6903 0.0000 28 1 5.6585 1.3025 -0.0009 29 1 4.3938 -1.4400 0.0085 30 1 3.5226 -3.3861 -0.4455 31 1 0.5598 -6.0096 0.8461 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259743692.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:38:22 Heat of formation + Delta-G solvation = -1.562437 kcal Electronic energy + Delta-G solvation = -17331.183035 eV Core-core repulsion = 14410.766057 eV Total energy + Delta-G solvation = -2920.416978 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.21 seconds Orbital eigenvalues (eV) -40.97496 -37.47264 -36.11594 -35.32293 -32.45893 -32.19012 -30.24889 -29.02795 -26.74567 -25.74252 -23.47205 -21.50270 -21.23021 -19.17045 -17.25843 -16.83217 -16.14973 -15.57774 -14.88868 -14.75480 -14.26714 -13.98793 -13.86251 -13.15011 -13.05444 -12.90818 -12.48895 -12.00117 -11.94689 -11.66121 -11.30626 -11.16102 -11.06819 -11.03741 -10.63467 -10.48338 -10.22920 -9.52589 -9.23559 -8.80121 -8.58073 -7.70818 -7.16013 -6.19568 -4.40236 1.30184 1.77016 2.25234 3.17018 3.21490 3.27374 3.30392 3.34190 4.08256 4.27162 4.91001 5.07550 5.09530 5.21162 5.37224 5.49557 5.56891 5.71110 5.77475 5.83693 6.02827 6.13012 6.30939 6.38722 6.47837 6.73088 6.88001 7.03961 7.40899 7.64124 7.73111 7.76272 7.90950 8.62918 9.11773 9.36274 10.83382 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.033411 B = 0.004737 C = 0.004642 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 837.842005 B = 5909.028197 C = 6030.583691 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.079 3.921 2 N -0.475 5.475 3 C 0.094 3.906 4 C -0.115 4.115 5 C -0.029 4.029 6 Cl -0.087 7.087 7 C -0.146 4.146 8 C -0.064 4.064 9 C -0.093 4.093 10 C -0.229 4.229 11 C 0.115 3.885 12 C 0.282 3.718 13 H 0.068 0.932 14 O -0.551 6.551 15 C -0.566 4.566 16 H 0.061 0.939 17 C 0.082 3.918 18 N -0.857 5.857 19 Si 0.895 3.105 20 H -0.271 1.271 21 H -0.282 1.282 22 H -0.280 1.280 23 H 0.071 0.929 24 H 0.072 0.928 25 H 0.089 0.911 26 H 0.123 0.877 27 H 0.126 0.874 28 H 0.127 0.873 29 H 0.144 0.856 30 H 0.353 0.647 31 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.478 13.032 -1.318 13.331 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 N -0.158 5.158 3 C -0.013 4.013 4 C -0.136 4.136 5 C -0.056 4.056 6 Cl -0.058 7.058 7 C -0.166 4.166 8 C -0.083 4.083 9 C -0.098 4.098 10 C -0.252 4.252 11 C 0.007 3.993 12 C 0.223 3.777 13 H 0.085 0.915 14 O -0.353 6.353 15 C -0.604 4.604 16 H 0.079 0.921 17 C -0.125 4.125 18 N -0.492 5.492 19 Si 0.722 3.278 20 H -0.195 1.195 21 H -0.207 1.207 22 H -0.206 1.206 23 H 0.089 0.911 24 H 0.090 0.910 25 H 0.108 0.892 26 H 0.141 0.859 27 H 0.143 0.857 28 H 0.145 0.855 29 H 0.162 0.838 30 H 0.198 0.802 31 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges 1.463 12.849 -1.741 13.049 hybrid contribution 0.248 -0.061 1.366 1.390 sum 1.711 12.788 -0.375 12.908 Atomic orbital electron populations 1.21915 0.77375 1.03672 1.03257 1.43840 1.05956 1.03726 1.62316 1.17998 0.90680 0.87683 1.04931 1.19638 0.98493 0.89028 1.06491 1.20204 0.94075 0.83362 1.07993 1.98326 1.95573 1.14641 1.97269 1.20333 0.94207 0.95868 1.06200 1.20132 0.98209 0.91094 0.98878 1.19358 0.91811 0.94203 1.04475 1.21237 0.95884 0.91535 1.16514 1.22498 0.90397 0.90825 0.95584 1.18155 0.89968 0.77283 0.92294 0.91457 1.86619 1.22510 1.69987 1.56228 1.21484 1.47732 0.99399 0.91738 0.92074 1.25036 0.93654 0.96560 0.97280 1.70073 1.40322 1.08097 1.30678 0.86502 0.77899 0.79056 0.84359 1.19543 1.20740 1.20584 0.91065 0.90967 0.89248 0.85873 0.85653 0.85519 0.83832 0.80210 0.92644 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 1.21 10.80 59.85 0.65 1.86 16 2 N -0.47 -8.91 3.18 -117.19 -0.37 -9.28 16 3 C 0.09 1.69 6.81 -83.99 -0.57 1.11 16 4 C -0.12 -1.78 9.73 -39.40 -0.38 -2.16 16 5 C -0.03 -0.42 6.31 -39.47 -0.25 -0.67 16 6 Cl -0.09 -1.09 28.93 -51.86 -1.50 -2.59 16 7 C -0.15 -2.03 9.75 -39.91 -0.39 -2.42 16 8 C -0.06 -0.97 10.05 -39.65 -0.40 -1.37 16 9 C -0.09 -1.68 6.37 -105.13 -0.67 -2.35 16 10 C -0.23 -4.47 10.37 -37.66 -0.39 -4.86 16 11 C 0.11 2.42 5.85 -81.76 -0.48 1.94 16 12 C 0.28 6.74 3.04 -29.04 -0.09 6.66 16 13 H 0.07 1.71 6.78 -51.93 -0.35 1.36 16 14 O -0.55 -13.46 12.59 -35.23 -0.44 -13.90 16 15 C -0.57 -14.65 8.75 -34.44 -0.30 -14.95 16 16 H 0.06 1.61 7.74 -52.49 -0.41 1.21 16 17 C 0.08 2.15 5.40 -17.82 -0.10 2.06 16 18 N -0.86 -23.74 12.84 55.43 0.71 -23.03 16 19 Si 0.90 20.23 29.54 -169.99 -5.02 15.21 16 20 H -0.27 -6.12 7.11 56.52 0.40 -5.71 16 21 H -0.28 -6.30 7.11 56.52 0.40 -5.89 16 22 H -0.28 -6.30 7.11 56.52 0.40 -5.90 16 23 H 0.07 1.04 8.14 -51.93 -0.42 0.62 16 24 H 0.07 0.88 8.10 -51.93 -0.42 0.46 16 25 H 0.09 1.39 6.81 -51.93 -0.35 1.03 16 26 H 0.12 1.67 8.06 -52.48 -0.42 1.25 16 27 H 0.13 1.44 8.06 -52.49 -0.42 1.02 16 28 H 0.13 1.59 8.06 -52.49 -0.42 1.17 16 29 H 0.14 2.57 7.49 -52.49 -0.39 2.17 16 30 H 0.35 7.55 8.09 45.56 0.37 7.92 16 31 H 0.26 6.91 8.31 -40.82 -0.34 6.57 16 LS Contribution 287.27 15.07 4.33 4.33 Total: -1.00 -29.11 287.27 -8.05 -37.16 By element: Atomic # 1 Polarization: 9.65 SS G_CDS: -2.38 Total: 7.27 kcal Atomic # 6 Polarization: -11.80 SS G_CDS: -3.37 Total: -15.16 kcal Atomic # 7 Polarization: -32.65 SS G_CDS: 0.34 Total: -32.32 kcal Atomic # 8 Polarization: -13.46 SS G_CDS: -0.44 Total: -13.90 kcal Atomic # 14 Polarization: 20.23 SS G_CDS: -5.02 Total: 15.21 kcal Atomic # 17 Polarization: -1.09 SS G_CDS: -1.50 Total: -2.59 kcal Total LS contribution 4.33 Total: 4.33 kcal Total: -29.11 -8.05 -37.16 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259743692.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 35.601 kcal (2) G-P(sol) polarization free energy of solvation -29.114 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.487 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.050 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.163 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.562 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds