Wall clock time and date at job start Mon Mar 30 2020 06:29:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.37995 * 119.91795 * 2 1 4 4 C 1.38232 * 120.39018 * 179.72533 * 3 2 1 5 5 C 1.38562 * 119.80988 * 359.97438 * 4 3 2 6 6 Cl 1.73603 * 120.05877 * 180.02562 * 5 4 3 7 7 C 1.37752 * 119.88591 * 0.02562 * 5 4 3 8 8 C 1.38919 * 120.79904 * 359.97438 * 7 5 4 9 9 N 1.39534 * 110.22085 * 179.97438 * 8 7 5 10 10 C 1.34370 * 112.24837 * 0.02562 * 9 8 7 11 11 O 1.21296 * 126.44119 * 180.02562 * 10 9 8 12 12 C 1.51137 * 132.85700 * 179.97438 * 7 5 4 13 13 C 1.53005 * 110.50869 * 61.39049 * 12 7 5 14 14 C 1.50697 * 110.51072 * 298.68378 * 12 7 5 15 15 H 1.08001 * 120.00216 * 0.02562 * 14 12 7 16 16 C 1.37882 * 119.99988 * 179.97438 * 14 12 7 17 17 N 1.31513 * 119.99949 * 0.02562 * 16 14 12 18 18 Si 1.86801 * 119.99906 * 179.97438 * 16 14 12 19 19 H 1.48493 * 109.47060 * 90.00202 * 18 16 14 20 20 H 1.48504 * 109.46860 * 210.00492 * 18 16 14 21 21 H 1.48501 * 109.47131 * 329.99988 * 18 16 14 22 22 H 1.09002 * 109.47316 * 90.00343 * 1 2 3 23 23 H 1.09006 * 109.47287 * 210.00051 * 1 2 3 24 24 H 1.08995 * 109.47754 * 330.00028 * 1 2 3 25 25 H 1.08005 * 119.80326 * 359.74274 * 3 2 1 26 26 H 1.07996 * 120.09666 * 180.02562 * 4 3 2 27 27 H 0.97001 * 123.87649 * 180.02562 * 9 8 7 28 28 H 1.09001 * 109.47421 * 60.00075 * 13 12 7 29 29 H 1.08997 * 109.47290 * 179.97438 * 13 12 7 30 30 H 1.09004 * 109.47124 * 300.00129 * 13 12 7 31 31 H 0.97000 * 119.99966 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1952 1.1961 0.0000 4 6 3.5775 1.2075 0.0057 5 6 4.2762 0.0109 0.0120 6 17 6.0122 0.0177 0.0199 7 6 3.5909 -1.1841 0.0120 8 6 2.2019 -1.2075 0.0063 9 7 1.7418 -2.5248 0.0070 10 6 2.7482 -3.4152 0.0134 11 8 2.6412 -4.6234 0.0150 12 6 4.0406 -2.6270 0.0173 13 6 4.8500 -2.9315 1.2795 14 6 4.8497 -2.9324 -1.2168 15 1 5.0306 -2.1594 -1.9489 16 6 5.3597 -4.1987 -1.4108 17 7 5.1398 -5.1399 -0.5191 18 14 6.3620 -4.5775 -2.9410 19 1 7.7975 -4.3101 -2.6712 20 1 6.1848 -6.0056 -3.3077 21 1 5.9002 -3.7180 -4.0605 22 1 -0.3634 -0.0001 -1.0277 23 1 -0.3634 -0.8900 0.5139 24 1 -0.3634 0.8899 0.5138 25 1 1.6507 2.1288 -0.0042 26 1 4.1113 2.1462 0.0061 27 1 0.8033 -2.7697 0.0032 28 1 4.2330 -2.7499 2.1596 29 1 5.1650 -3.9749 1.2663 30 1 5.7284 -2.2869 1.3123 31 1 5.4983 -6.0308 -0.6557 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259763275.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:29:53 Heat of formation + Delta-G solvation = -8.507116 kcal Electronic energy + Delta-G solvation = -18254.085019 eV Core-core repulsion = 15333.366897 eV Total energy + Delta-G solvation = -2920.718122 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -40.73445 -37.65581 -35.88426 -34.69672 -33.89976 -32.17912 -30.33110 -28.22745 -26.31037 -25.36093 -23.74774 -21.69206 -20.44771 -19.16897 -17.32723 -16.21347 -15.70327 -15.33271 -14.53892 -14.32710 -14.26832 -13.59575 -13.32615 -12.97633 -12.81897 -12.44652 -12.39307 -11.87859 -11.41114 -11.22421 -11.10041 -10.89305 -10.85839 -10.70992 -10.33980 -10.14304 -9.85318 -9.68888 -9.48249 -8.60918 -8.34815 -7.94988 -7.31779 -5.98763 -4.13203 1.60545 1.78264 2.82365 3.30376 3.37335 3.40179 3.71054 3.86213 4.28349 4.41673 5.01133 5.16126 5.23029 5.32049 5.52034 5.67386 5.71517 5.90806 5.97456 6.04716 6.20878 6.58075 6.70215 6.75731 6.78332 6.94050 7.10294 7.27546 7.62579 7.74209 7.79355 7.97828 8.18692 8.82767 9.31953 9.50099 10.99725 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.019483 B = 0.009659 C = 0.007526 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1436.793346 B = 2898.219524 C = 3719.305500 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.105 4.105 2 C -0.127 4.127 3 C -0.092 4.092 4 C -0.148 4.148 5 C 0.015 3.985 6 Cl -0.065 7.065 7 C -0.092 4.092 8 C 0.164 3.836 9 N -0.679 5.679 10 C 0.527 3.473 11 O -0.470 6.470 12 C 0.093 3.907 13 C -0.123 4.123 14 C -0.511 4.511 15 H 0.067 0.933 16 C 0.072 3.928 17 N -0.840 5.840 18 Si 0.895 3.105 19 H -0.278 1.278 20 H -0.286 1.286 21 H -0.273 1.273 22 H 0.065 0.935 23 H 0.058 0.942 24 H 0.065 0.935 25 H 0.127 0.873 26 H 0.128 0.872 27 H 0.391 0.609 28 H 0.010 0.990 29 H 0.099 0.901 30 H 0.050 0.950 31 H 0.263 0.737 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.360 11.390 2.130 12.767 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.162 4.162 2 C -0.131 4.131 3 C -0.111 4.111 4 C -0.168 4.168 5 C -0.012 4.012 6 Cl -0.036 7.036 7 C -0.095 4.095 8 C 0.064 3.936 9 N -0.324 5.324 10 C 0.316 3.684 11 O -0.339 6.339 12 C 0.089 3.911 13 C -0.181 4.181 14 C -0.548 4.548 15 H 0.085 0.915 16 C -0.135 4.135 17 N -0.474 5.474 18 Si 0.722 3.278 19 H -0.204 1.204 20 H -0.212 1.212 21 H -0.198 1.198 22 H 0.084 0.916 23 H 0.077 0.923 24 H 0.084 0.916 25 H 0.145 0.855 26 H 0.146 0.854 27 H 0.227 0.773 28 H 0.029 0.971 29 H 0.118 0.882 30 H 0.069 0.931 31 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -5.095 10.333 2.189 11.727 hybrid contribution 0.064 -0.271 -0.930 0.971 sum -5.031 10.062 1.260 11.320 Atomic orbital electron populations 1.20627 0.91417 1.02241 1.01914 1.19139 0.95605 0.90601 1.07725 1.20430 0.93139 0.96420 1.01123 1.20781 0.93934 0.96197 1.05884 1.19952 0.84665 0.92892 1.03710 1.98342 1.09753 1.98806 1.96676 1.20257 0.92228 0.96703 1.00348 1.17889 0.92725 0.84927 0.98019 1.44415 1.09946 1.04910 1.73097 1.22007 0.86360 0.86966 0.73035 1.90696 1.85018 1.11941 1.46252 1.17734 0.91342 0.83497 0.98484 1.21686 0.98239 1.05640 0.92560 1.20474 1.33131 0.96795 1.04431 0.91475 1.25016 0.95695 0.96115 0.96657 1.69969 1.41471 1.02496 1.33444 0.86543 0.80480 0.77547 0.83228 1.20356 1.21170 1.19807 0.91605 0.92328 0.91577 0.85503 0.85414 0.77259 0.97096 0.88210 0.93121 0.92698 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.21 9.97 36.00 0.36 -0.85 16 2 C -0.13 -1.93 5.90 -104.31 -0.62 -2.54 16 3 C -0.09 -1.27 9.66 -39.67 -0.38 -1.65 16 4 C -0.15 -2.25 9.86 -39.46 -0.39 -2.64 16 5 C 0.02 0.28 6.31 -39.64 -0.25 0.03 16 6 Cl -0.06 -1.20 27.29 -51.86 -1.42 -2.62 16 7 C -0.09 -1.94 4.79 -104.33 -0.50 -2.44 16 8 C 0.16 3.12 6.81 -83.70 -0.57 2.55 16 9 N -0.68 -13.63 5.80 -9.70 -0.06 -13.68 16 10 C 0.53 13.12 7.19 -10.83 -0.08 13.05 16 11 O -0.47 -13.23 16.04 5.54 0.09 -13.14 16 12 C 0.09 2.28 0.52 -157.41 -0.08 2.20 16 13 C -0.12 -2.98 8.39 37.16 0.31 -2.67 16 14 C -0.51 -13.63 7.84 -34.44 -0.27 -13.90 16 15 H 0.07 1.81 7.77 -52.49 -0.41 1.40 16 16 C 0.07 1.97 5.17 -17.82 -0.09 1.88 16 17 N -0.84 -23.83 9.18 55.43 0.51 -23.32 16 18 Si 0.89 21.34 29.54 -169.99 -5.02 16.32 16 19 H -0.28 -6.50 7.11 56.52 0.40 -6.10 16 20 H -0.29 -6.84 7.11 56.52 0.40 -6.44 16 21 H -0.27 -6.48 7.11 56.52 0.40 -6.08 16 22 H 0.07 0.70 8.14 -51.93 -0.42 0.28 16 23 H 0.06 0.65 7.58 -51.93 -0.39 0.26 16 24 H 0.07 0.62 8.08 -51.93 -0.42 0.20 16 25 H 0.13 1.30 8.06 -52.48 -0.42 0.88 16 26 H 0.13 1.61 8.06 -52.49 -0.42 1.18 16 27 H 0.39 6.58 8.47 -40.82 -0.35 6.24 16 28 H 0.01 0.23 8.14 -51.93 -0.42 -0.19 16 29 H 0.10 2.67 5.89 -51.93 -0.31 2.36 16 30 H 0.05 1.16 6.82 -51.93 -0.35 0.80 16 31 H 0.26 7.20 8.31 -40.82 -0.34 6.86 16 LS Contribution 276.90 15.07 4.17 4.17 Total: -1.00 -30.28 276.90 -7.33 -37.62 By element: Atomic # 1 Polarization: 4.70 SS G_CDS: -3.05 Total: 1.65 kcal Atomic # 6 Polarization: -4.43 SS G_CDS: -2.56 Total: -6.99 kcal Atomic # 7 Polarization: -37.46 SS G_CDS: 0.45 Total: -37.01 kcal Atomic # 8 Polarization: -13.23 SS G_CDS: 0.09 Total: -13.14 kcal Atomic # 14 Polarization: 21.34 SS G_CDS: -5.02 Total: 16.32 kcal Atomic # 17 Polarization: -1.20 SS G_CDS: -1.42 Total: -2.62 kcal Total LS contribution 4.17 Total: 4.17 kcal Total: -30.28 -7.33 -37.62 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259763275.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.108 kcal (2) G-P(sol) polarization free energy of solvation -30.281 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.174 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.334 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.615 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.507 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds