Wall clock time and date at job start Mon Mar 30 2020 06:29:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.39353 * 119.93687 * 2 1 4 4 C 1.38906 * 118.95572 * 179.97438 * 3 2 1 5 5 C 1.37693 * 120.82856 * 0.02562 * 4 3 2 6 6 C 1.38373 * 119.93383 * 359.97438 * 5 4 3 7 7 C 1.38050 * 119.93767 * 179.97438 * 2 1 3 8 8 Cl 1.73600 * 119.82858 * 0.04084 * 7 2 1 9 9 C 1.51138 * 106.34149 * 180.02562 * 4 3 2 10 10 C 1.52995 * 110.51155 * 241.22423 * 9 4 3 11 11 C 1.50694 * 110.50931 * 118.64980 * 9 4 3 12 12 H 1.08000 * 120.00563 * 1.90355 * 11 9 4 13 13 C 1.37885 * 119.99902 * 181.90518 * 11 9 4 14 14 N 1.31516 * 119.99913 * 359.97438 * 13 11 9 15 15 Si 1.86798 * 119.99766 * 179.97438 * 13 11 9 16 16 H 1.48500 * 109.47353 * 269.99586 * 15 13 11 17 17 H 1.48501 * 109.47293 * 30.00037 * 15 13 11 18 18 H 1.48504 * 109.46680 * 149.99835 * 15 13 11 19 19 C 1.51398 * 104.18541 * 359.93736 * 9 4 3 20 20 O 1.21292 * 126.43786 * 180.02562 * 19 9 4 21 21 N 1.34671 * 106.95677 * 0.11072 * 19 9 4 22 22 H 1.08997 * 109.47206 * 270.02061 * 1 2 3 23 23 H 1.09005 * 109.47314 * 30.02202 * 1 2 3 24 24 H 1.08994 * 109.47311 * 150.01817 * 1 2 3 25 25 H 1.08004 * 120.03319 * 179.97438 * 5 4 3 26 26 H 1.07992 * 120.09333 * 180.02562 * 6 5 4 27 27 H 1.08998 * 109.47228 * 298.09338 * 10 9 4 28 28 H 1.09004 * 109.47729 * 58.09514 * 10 9 4 29 29 H 1.09003 * 109.47445 * 178.09881 * 10 9 4 30 30 H 0.97001 * 119.99646 * 179.97438 * 14 13 11 31 31 H 0.96997 * 123.83720 * 179.97438 * 21 19 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2025 1.2076 0.0000 4 6 3.5913 1.1838 0.0005 5 6 4.2766 -0.0105 0.0005 6 6 3.5802 -1.2062 0.0005 7 6 2.1960 -1.1963 0.0005 8 17 1.3218 -2.6962 0.0001 9 6 4.0413 2.6266 0.0010 10 6 4.8600 2.9333 -1.2546 11 6 4.8441 2.9289 1.2400 12 1 5.0469 2.1465 1.9564 13 6 5.3196 4.2044 1.4593 14 7 5.0731 5.1571 0.5868 15 14 6.3141 4.5792 2.9955 16 1 5.3993 5.0004 4.0868 17 1 7.0565 3.3630 3.4135 18 1 7.2770 5.6724 2.7072 19 6 2.7506 3.4179 -0.0009 20 8 2.6463 4.6263 -0.0016 21 7 1.7425 2.5249 0.0002 22 1 -0.3633 0.0004 1.0276 23 1 -0.3634 0.8898 -0.5142 24 1 -0.3633 -0.8901 -0.5135 25 1 5.3566 -0.0140 0.0006 26 1 4.1150 -2.1443 0.0010 27 1 5.7558 2.3125 -1.2649 28 1 4.2607 2.7211 -2.1400 29 1 5.1468 3.9849 -1.2535 30 1 5.4073 6.0545 0.7412 31 1 0.8039 2.7699 -0.0002 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259771329.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:29:56 Heat of formation + Delta-G solvation = -9.368270 kcal Electronic energy + Delta-G solvation = -18011.283684 eV Core-core repulsion = 15090.528220 eV Total energy + Delta-G solvation = -2920.755464 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -40.73770 -37.79324 -36.22732 -34.47082 -34.14746 -32.35642 -30.39654 -28.07469 -26.46735 -25.42787 -23.78264 -21.71315 -20.41858 -19.19001 -17.35814 -16.27431 -15.76200 -15.52367 -14.61165 -14.39112 -14.38039 -13.50082 -13.31882 -13.11832 -12.84920 -12.38183 -12.24198 -11.98682 -11.54595 -11.38831 -11.23144 -11.14081 -10.91423 -10.73497 -10.60562 -10.34719 -9.93898 -9.75186 -9.47907 -8.67079 -8.42368 -8.09439 -7.30611 -6.06337 -4.22626 1.63876 1.69485 2.34931 3.25498 3.32809 3.34603 3.69999 3.88813 4.28720 4.35228 5.01937 5.11947 5.22766 5.30171 5.64181 5.73681 5.75070 5.89587 5.92934 5.97835 6.33557 6.52921 6.60756 6.71995 6.79932 6.93826 7.12608 7.21133 7.56812 7.69362 7.75869 7.88596 8.09968 8.73858 9.30240 9.41701 10.91952 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.028530 B = 0.006535 C = 0.005954 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 981.202286 B = 4283.473271 C = 4701.789507 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.109 4.109 2 C -0.120 4.120 3 C 0.164 3.836 4 C -0.088 4.088 5 C -0.062 4.062 6 C -0.142 4.142 7 C -0.017 4.017 8 Cl -0.084 7.084 9 C 0.086 3.914 10 C -0.119 4.119 11 C -0.524 4.524 12 H 0.068 0.932 13 C 0.071 3.929 14 N -0.836 5.836 15 Si 0.897 3.103 16 H -0.280 1.280 17 H -0.271 1.271 18 H -0.284 1.284 19 C 0.528 3.472 20 O -0.467 6.467 21 N -0.680 5.680 22 H 0.068 0.932 23 H 0.060 0.940 24 H 0.071 0.929 25 H 0.133 0.867 26 H 0.129 0.871 27 H 0.045 0.955 28 H 0.014 0.986 29 H 0.095 0.905 30 H 0.264 0.736 31 H 0.390 0.610 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.184 -11.154 -2.260 12.506 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C -0.125 4.125 3 C 0.064 3.936 4 C -0.091 4.091 5 C -0.081 4.081 6 C -0.162 4.162 7 C -0.044 4.044 8 Cl -0.055 7.055 9 C 0.082 3.918 10 C -0.177 4.177 11 C -0.561 4.561 12 H 0.086 0.914 13 C -0.137 4.137 14 N -0.469 5.469 15 Si 0.724 3.276 16 H -0.206 1.206 17 H -0.196 1.196 18 H -0.209 1.209 19 C 0.317 3.683 20 O -0.335 6.335 21 N -0.324 5.324 22 H 0.086 0.914 23 H 0.079 0.921 24 H 0.090 0.910 25 H 0.151 0.849 26 H 0.147 0.853 27 H 0.064 0.936 28 H 0.033 0.967 29 H 0.114 0.886 30 H 0.074 0.926 31 H 0.227 0.773 Dipole moment (debyes) X Y Z Total from point charges -5.158 -10.227 -2.321 11.687 hybrid contribution -0.215 0.158 0.963 0.999 sum -5.372 -10.069 -1.358 11.493 Atomic orbital electron populations 1.20684 0.90979 1.02667 1.02273 1.18725 0.95801 0.89344 1.08607 1.17818 0.93413 0.84410 0.97957 1.20610 0.92062 0.97326 0.99111 1.20189 1.00178 0.89584 0.98122 1.20783 0.91425 0.98603 1.05345 1.20126 0.91802 0.85183 1.07306 1.98311 1.77127 1.32917 1.97166 1.17784 0.91420 0.84309 0.98240 1.21626 0.97880 1.05154 0.93013 1.20555 1.34328 0.96044 1.05170 0.91406 1.25069 0.95661 0.96140 0.96789 1.70016 1.41329 1.01714 1.33836 0.86512 0.79885 0.78205 0.83000 1.20638 1.19603 1.20942 1.22013 0.86231 0.86913 0.73098 1.90705 1.84939 1.11836 1.46001 1.44472 1.09975 1.04798 1.73175 0.91363 0.92116 0.91046 0.84885 0.85332 0.93638 0.96705 0.88633 0.92584 0.77319 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.41 9.56 36.01 0.34 -1.07 16 2 C -0.12 -1.94 5.91 -104.28 -0.62 -2.55 16 3 C 0.16 3.10 6.81 -83.69 -0.57 2.53 16 4 C -0.09 -1.79 4.95 -104.36 -0.52 -2.31 16 5 C -0.06 -1.08 10.03 -39.73 -0.40 -1.47 16 6 C -0.14 -2.14 9.84 -39.46 -0.39 -2.53 16 7 C -0.02 -0.26 6.30 -39.58 -0.25 -0.51 16 8 Cl -0.08 -1.08 27.25 -51.86 -1.41 -2.50 16 9 C 0.09 2.05 0.66 -157.41 -0.10 1.95 16 10 C -0.12 -2.73 8.41 37.15 0.31 -2.42 16 11 C -0.52 -13.67 8.08 -34.44 -0.28 -13.95 16 12 H 0.07 1.75 7.77 -52.49 -0.41 1.35 16 13 C 0.07 1.90 5.17 -17.82 -0.09 1.81 16 14 N -0.84 -23.31 9.12 55.43 0.51 -22.81 16 15 Si 0.90 20.71 29.54 -169.99 -5.02 15.69 16 16 H -0.28 -6.58 7.11 56.52 0.40 -6.18 16 17 H -0.27 -6.11 7.11 56.52 0.40 -5.70 16 18 H -0.28 -6.48 7.11 56.52 0.40 -6.08 16 19 C 0.53 12.96 7.20 -10.69 -0.08 12.89 16 20 O -0.47 -12.98 15.83 5.55 0.09 -12.89 16 21 N -0.68 -13.57 5.81 -9.63 -0.06 -13.63 16 22 H 0.07 0.83 8.14 -51.93 -0.42 0.41 16 23 H 0.06 0.73 7.59 -51.93 -0.39 0.34 16 24 H 0.07 0.84 6.87 -51.93 -0.36 0.48 16 25 H 0.13 2.14 8.06 -52.48 -0.42 1.71 16 26 H 0.13 1.61 8.06 -52.49 -0.42 1.19 16 27 H 0.04 0.96 8.14 -51.93 -0.42 0.54 16 28 H 0.01 0.30 8.14 -51.93 -0.42 -0.12 16 29 H 0.10 2.46 6.09 -51.93 -0.32 2.14 16 30 H 0.26 7.10 8.31 -40.82 -0.34 6.76 16 31 H 0.39 6.62 8.48 -40.82 -0.35 6.27 16 LS Contribution 277.44 15.07 4.18 4.18 Total: -1.00 -29.07 277.44 -7.42 -36.49 By element: Atomic # 1 Polarization: 6.17 SS G_CDS: -3.07 Total: 3.10 kcal Atomic # 6 Polarization: -5.01 SS G_CDS: -2.63 Total: -7.64 kcal Atomic # 7 Polarization: -36.88 SS G_CDS: 0.45 Total: -36.43 kcal Atomic # 8 Polarization: -12.98 SS G_CDS: 0.09 Total: -12.89 kcal Atomic # 14 Polarization: 20.71 SS G_CDS: -5.02 Total: 15.69 kcal Atomic # 17 Polarization: -1.08 SS G_CDS: -1.41 Total: -2.50 kcal Total LS contribution 4.18 Total: 4.18 kcal Total: -29.07 -7.42 -36.49 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259771329.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.118 kcal (2) G-P(sol) polarization free energy of solvation -29.067 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.949 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.419 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.486 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.368 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds