Wall clock time and date at job start Mon Mar 30 2020 06:29:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.38061 * 120.02492 * 2 1 4 4 C 1.38613 * 120.71445 * 179.97438 * 3 2 1 5 5 C 1.38057 * 120.37239 * 0.11083 * 4 3 2 6 6 Cl 1.73605 * 120.21207 * 179.97438 * 5 4 3 7 7 C 1.39760 * 119.57253 * 359.97212 * 5 4 3 8 8 C 1.38922 * 120.02677 * 180.02562 * 2 1 3 9 9 N 1.38454 * 120.53851 * 359.81175 * 8 2 1 10 10 C 1.36735 * 120.04011 * 341.20907 * 9 8 2 11 11 H 1.08006 * 120.00293 * 322.24931 * 10 9 8 12 12 C 1.38912 * 120.00282 * 141.97068 * 10 9 8 13 13 N 1.31494 * 119.99656 * 351.43299 * 12 10 9 14 14 Si 1.86803 * 120.00287 * 171.43742 * 12 10 9 15 15 H 1.48497 * 109.46990 * 90.00168 * 14 12 10 16 16 H 1.48500 * 109.46875 * 209.99872 * 14 12 10 17 17 H 1.48491 * 109.46865 * 330.00136 * 14 12 10 18 18 C 1.46778 * 119.91982 * 161.48406 * 9 8 2 19 19 C 1.53128 * 109.07471 * 47.95309 * 18 9 8 20 20 C 1.46935 * 120.85935 * 179.79451 * 7 5 4 21 21 O 1.21339 * 121.25431 * 345.67765 * 20 7 5 22 22 H 1.08996 * 109.47276 * 262.82901 * 1 2 3 23 23 H 1.09001 * 109.47476 * 22.83427 * 1 2 3 24 24 H 1.09006 * 109.47229 * 142.82843 * 1 2 3 25 25 H 1.08003 * 119.64524 * 359.97438 * 3 2 1 26 26 H 1.07994 * 119.81256 * 180.08704 * 4 3 2 27 27 H 0.97003 * 120.00514 * 179.97438 * 13 12 10 28 28 H 1.09002 * 109.57363 * 167.85115 * 18 9 8 29 29 H 1.08997 * 109.58028 * 288.23962 * 18 9 8 30 30 H 1.08999 * 109.87224 * 183.49337 * 19 18 9 31 31 H 1.09003 * 109.62711 * 62.69636 * 19 18 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1978 1.1953 0.0000 4 6 3.5838 1.2120 0.0005 5 6 4.2961 0.0294 -0.0012 6 17 6.0320 0.0552 -0.0012 7 6 3.6108 -1.1886 -0.0030 8 6 2.2021 -1.2028 -0.0005 9 7 1.5217 -2.4086 0.0028 10 6 0.2105 -2.4536 0.3879 11 1 -0.1355 -1.8314 1.2001 12 6 -0.6780 -3.2953 -0.2693 13 7 -0.3038 -3.9206 -1.3638 14 14 -2.4042 -3.5386 0.4017 15 1 -3.3132 -2.5249 -0.1910 16 1 -2.8844 -4.8994 0.0509 17 1 -2.3874 -3.3851 1.8786 18 6 2.2114 -3.6395 -0.4016 19 6 3.5583 -3.7195 0.3224 20 6 4.3405 -2.4640 -0.0094 21 8 5.5246 -2.5105 -0.2699 22 1 -0.3633 -0.1283 1.0196 23 1 -0.3634 0.9471 -0.3988 24 1 -0.3634 -0.8189 -0.6209 25 1 1.6524 2.1275 -0.0004 26 1 4.1094 2.1554 0.0019 27 1 -0.9240 -4.5087 -1.8226 28 1 1.6026 -4.5036 -0.1354 29 1 2.3798 -3.6269 -1.4785 30 1 4.1088 -4.5976 -0.0152 31 1 3.3928 -3.7777 1.3982 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259849361.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:29:50 Heat of formation + Delta-G solvation = -3.078247 kcal Electronic energy + Delta-G solvation = -18182.109528 eV Core-core repulsion = 15261.626820 eV Total energy + Delta-G solvation = -2920.482708 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -39.83013 -37.58989 -36.50613 -35.40892 -33.00817 -31.89871 -30.10185 -29.07401 -26.66801 -24.48189 -23.06370 -22.52255 -20.36268 -18.36885 -17.74602 -16.43862 -15.46960 -15.41790 -14.97722 -14.18220 -13.89231 -13.75054 -13.53037 -13.09971 -12.97928 -12.43268 -12.15369 -11.93778 -11.59903 -11.52125 -11.23402 -11.13654 -10.97420 -10.69145 -10.45782 -10.41735 -10.38646 -10.20580 -9.21103 -8.84568 -8.57480 -7.91934 -6.88566 -6.58764 -4.14940 1.50304 2.26757 2.85390 2.97569 3.03881 3.05961 3.19607 3.80906 4.40999 4.54872 4.76477 4.89208 5.53788 5.69575 5.77168 5.84833 5.91590 6.02085 6.19112 6.38012 6.46716 6.49787 6.57277 6.64498 6.86458 6.90648 7.04172 7.09466 7.15990 7.37515 7.49390 7.83553 8.27661 8.39805 8.85870 9.25081 10.31518 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.027682 B = 0.007642 C = 0.006204 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1011.241239 B = 3663.065777 C = 4512.006135 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 C -0.155 4.155 3 C -0.049 4.049 4 C -0.231 4.231 5 C 0.072 3.928 6 Cl -0.076 7.076 7 C -0.297 4.297 8 C 0.260 3.740 9 N -0.420 5.420 10 C -0.313 4.313 11 H 0.104 0.896 12 C 0.035 3.965 13 N -0.858 5.858 14 Si 0.923 3.077 15 H -0.271 1.271 16 H -0.279 1.279 17 H -0.266 1.266 18 C 0.144 3.856 19 C -0.187 4.187 20 C 0.402 3.598 21 O -0.475 6.475 22 H 0.056 0.944 23 H 0.034 0.966 24 H 0.100 0.900 25 H 0.116 0.884 26 H 0.115 0.885 27 H 0.276 0.724 28 H 0.097 0.903 29 H 0.062 0.938 30 H 0.090 0.910 31 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.565 3.388 2.592 4.303 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C -0.159 4.159 3 C -0.070 4.070 4 C -0.253 4.253 5 C 0.045 3.955 6 Cl -0.047 7.047 7 C -0.306 4.306 8 C 0.137 3.863 9 N -0.103 5.103 10 C -0.441 4.441 11 H 0.121 0.879 12 C -0.173 4.173 13 N -0.492 5.492 14 Si 0.748 3.252 15 H -0.197 1.197 16 H -0.205 1.205 17 H -0.190 1.190 18 C 0.021 3.979 19 C -0.225 4.225 20 C 0.283 3.717 21 O -0.353 6.353 22 H 0.074 0.926 23 H 0.053 0.947 24 H 0.118 0.882 25 H 0.134 0.866 26 H 0.133 0.867 27 H 0.086 0.914 28 H 0.115 0.885 29 H 0.080 0.920 30 H 0.109 0.891 31 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 1.048 2.853 2.287 3.803 hybrid contribution -0.771 -0.127 0.218 0.812 sum 0.277 2.726 2.505 3.713 Atomic orbital electron populations 1.21104 0.90953 1.01520 1.01973 1.19389 0.96379 0.91013 1.09169 1.20658 0.92887 0.96639 0.96803 1.20291 0.93800 0.95587 1.15642 1.20598 0.83079 0.93810 0.98015 1.98327 1.11018 1.98849 1.96466 1.19217 0.92254 0.93439 1.25648 1.17863 0.88836 0.87152 0.92421 1.42478 1.09497 1.01895 1.56405 1.19785 0.83487 1.25968 1.14888 0.87883 1.25597 1.00187 0.97035 0.94477 1.69931 1.37083 1.27116 1.15038 0.85962 0.81366 0.78271 0.79608 1.19684 1.20463 1.19021 1.21360 0.89462 0.89224 0.97865 1.22723 0.98814 0.97868 1.03129 1.22116 0.87491 0.89676 0.72369 1.90499 1.17033 1.88892 1.38871 0.92554 0.94706 0.88178 0.86603 0.86686 0.91368 0.88503 0.92014 0.89148 0.88923 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -1.85 8.14 36.00 0.29 -1.56 16 2 C -0.16 -3.12 5.86 -104.44 -0.61 -3.73 16 3 C -0.05 -0.89 9.64 -39.51 -0.38 -1.27 16 4 C -0.23 -4.24 9.82 -39.51 -0.39 -4.63 16 5 C 0.07 1.48 6.35 -39.08 -0.25 1.23 16 6 Cl -0.08 -1.46 26.34 -51.86 -1.37 -2.82 16 7 C -0.30 -6.44 5.85 -104.81 -0.61 -7.06 16 8 C 0.26 5.69 6.32 -83.62 -0.53 5.16 16 9 N -0.42 -9.37 2.88 -112.60 -0.32 -9.70 16 10 C -0.31 -6.99 5.86 -15.12 -0.09 -7.08 16 11 H 0.10 2.24 5.65 -52.48 -0.30 1.94 16 12 C 0.03 0.77 4.74 -17.45 -0.08 0.68 16 13 N -0.86 -20.19 11.55 55.50 0.64 -19.55 16 14 Si 0.92 17.47 29.56 -169.99 -5.03 12.45 16 15 H -0.27 -5.14 7.11 56.52 0.40 -4.74 16 16 H -0.28 -5.36 7.11 56.52 0.40 -4.96 16 17 H -0.27 -4.97 7.11 56.52 0.40 -4.57 16 18 C 0.14 3.02 4.94 -3.82 -0.02 3.00 16 19 C -0.19 -3.51 6.35 -27.37 -0.17 -3.68 16 20 C 0.40 8.58 6.84 -30.35 -0.21 8.38 16 21 O -0.47 -10.76 15.23 5.51 0.08 -10.67 16 22 H 0.06 1.00 6.76 -51.93 -0.35 0.65 16 23 H 0.03 0.56 8.03 -51.93 -0.42 0.14 16 24 H 0.10 2.12 5.53 -51.93 -0.29 1.83 16 25 H 0.12 1.72 8.05 -52.48 -0.42 1.30 16 26 H 0.12 1.84 8.06 -52.49 -0.42 1.42 16 27 H 0.28 6.19 8.31 -40.82 -0.34 5.85 16 28 H 0.10 2.07 6.84 -51.93 -0.36 1.71 16 29 H 0.06 1.38 8.14 -51.93 -0.42 0.96 16 30 H 0.09 1.52 8.14 -51.93 -0.42 1.10 16 31 H 0.09 1.65 8.14 -51.93 -0.42 1.23 16 LS Contribution 269.26 15.07 4.06 4.06 Total: -1.00 -24.99 269.26 -7.94 -32.92 By element: Atomic # 1 Polarization: 6.82 SS G_CDS: -2.95 Total: 3.86 kcal Atomic # 6 Polarization: -7.50 SS G_CDS: -3.05 Total: -10.55 kcal Atomic # 7 Polarization: -29.56 SS G_CDS: 0.32 Total: -29.24 kcal Atomic # 8 Polarization: -10.76 SS G_CDS: 0.08 Total: -10.67 kcal Atomic # 14 Polarization: 17.47 SS G_CDS: -5.03 Total: 12.45 kcal Atomic # 17 Polarization: -1.46 SS G_CDS: -1.37 Total: -2.82 kcal Total LS contribution 4.06 Total: 4.06 kcal Total: -24.99 -7.94 -32.92 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259849361.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.846 kcal (2) G-P(sol) polarization free energy of solvation -24.986 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.860 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.938 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.924 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.078 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds