Wall clock time and date at job start Mon Mar 30 2020 06:31:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35760 * 116.99453 * 2 1 4 4 C 1.41008 * 120.22467 * 90.00035 * 3 2 1 5 5 C 1.40759 * 133.04179 * 359.95460 * 4 3 2 6 6 C 1.50700 * 126.23824 * 0.05912 * 5 4 3 7 7 C 1.39186 * 107.52483 * 180.02562 * 5 4 3 8 8 C 1.39892 * 125.70719 * 179.97438 * 7 5 4 9 9 H 1.07997 * 119.99854 * 22.04084 * 8 7 5 10 10 C 1.40121 * 119.99772 * 202.04543 * 8 7 5 11 11 N 1.30801 * 120.00140 * 166.06764 * 10 8 7 12 12 Si 1.86798 * 120.00065 * 346.06200 * 10 8 7 13 13 H 1.48499 * 109.47067 * 180.02562 * 12 10 8 14 14 H 1.48500 * 109.47274 * 300.00450 * 12 10 8 15 15 H 1.48497 * 109.47409 * 60.00248 * 12 10 8 16 16 N 1.38335 * 108.58706 * 0.24088 * 7 5 4 17 17 H 0.96997 * 125.62704 * 179.75676 * 16 7 5 18 18 C 1.38190 * 108.74766 * 359.60033 * 16 7 5 19 19 C 1.38837 * 132.67507 * 180.10514 * 18 16 7 20 20 C 1.38087 * 120.18637 * 180.31633 * 19 18 16 21 21 C 1.38181 * 120.22508 * 269.92872 * 3 2 1 22 22 Cl 1.73592 * 119.82246 * 0.05683 * 21 3 2 23 23 H 1.09002 * 109.46885 * 179.97438 * 1 2 3 24 24 H 1.08997 * 109.47370 * 300.00026 * 1 2 3 25 25 H 1.09001 * 109.46604 * 60.00375 * 1 2 3 26 26 H 1.09003 * 109.47022 * 270.00345 * 6 5 4 27 27 H 1.08997 * 109.47121 * 29.99966 * 6 5 4 28 28 H 1.09000 * 109.47234 * 150.00586 * 6 5 4 29 29 H 0.97005 * 119.99303 * 354.36410 * 11 10 8 30 30 H 1.08002 * 119.90369 * 0.29826 * 19 18 16 31 31 H 1.07997 * 119.61760 * 180.02562 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0452 1.2097 0.0000 4 6 2.3674 1.8422 1.2184 5 6 2.1828 1.4814 2.5664 6 6 1.5381 0.2156 3.0695 7 6 2.7048 2.5065 3.3499 8 6 2.7198 2.5386 4.7484 9 1 2.6444 1.6195 5.3104 10 6 2.8325 3.7633 5.4199 11 7 2.5759 3.8330 6.7006 12 14 3.3492 5.2964 4.4861 13 1 3.3931 6.4520 5.4176 14 1 4.6953 5.0860 3.8953 15 1 2.3706 5.5698 3.4032 16 7 3.2010 3.4911 2.5144 17 1 3.6176 4.3187 2.8015 18 6 3.0085 3.0995 1.2032 19 6 3.3139 3.6974 -0.0120 20 6 2.9925 3.0654 -1.1970 21 6 2.3623 1.8288 -1.1940 22 17 1.9692 1.0564 -2.6980 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3634 0.5138 0.8899 25 1 -0.3632 0.5138 -0.8901 26 1 0.4668 0.3766 3.1901 27 1 1.7063 -0.5877 2.3523 28 1 1.9747 -0.0575 4.0302 29 1 2.2294 3.0572 7.1686 30 1 3.8041 4.6596 -0.0306 31 1 3.2347 3.5386 -2.1371 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260102178.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:31:34 Heat of formation + Delta-G solvation = -1.642677 kcal Electronic energy + Delta-G solvation = -17831.034983 eV Core-core repulsion = 14910.614526 eV Total energy + Delta-G solvation = -2920.420457 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -40.43619 -38.00782 -36.18715 -35.27006 -33.68908 -31.83679 -29.32985 -28.91847 -26.47254 -26.30251 -24.47619 -21.59998 -21.06424 -18.98591 -18.19762 -17.73384 -15.85653 -15.69786 -15.17903 -14.94845 -14.37934 -13.93836 -13.57154 -13.31647 -12.78781 -12.45318 -12.21143 -12.00337 -11.89258 -11.76628 -11.41242 -11.31246 -10.98077 -10.70246 -10.36892 -10.20269 -10.09940 -9.94465 -9.60202 -9.28483 -8.60050 -7.77237 -7.47334 -6.81120 -4.72452 1.66955 2.16719 2.64851 2.73827 2.77761 2.89950 3.51497 3.57754 3.98348 4.18301 4.66889 4.78611 5.45125 5.71700 5.74651 5.82580 5.94767 6.06002 6.09680 6.29140 6.32726 6.68944 6.73103 6.79598 6.89301 6.96611 7.06980 7.16701 7.20073 7.44819 7.54784 8.00021 8.08618 8.25909 8.35909 8.61099 9.64037 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.029255 B = 0.006890 C = 0.005725 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 956.860367 B = 4063.056117 C = 4889.750224 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.036 3.964 2 O -0.320 6.320 3 C 0.075 3.925 4 C -0.026 4.026 5 C -0.324 4.324 6 C -0.038 4.038 7 C 0.278 3.722 8 C -0.493 4.493 9 H 0.103 0.897 10 C 0.041 3.959 11 N -0.798 5.798 12 Si 1.036 2.964 13 H -0.265 1.265 14 H -0.267 1.267 15 H -0.260 1.260 16 N -0.629 5.629 17 H 0.391 0.609 18 C 0.056 3.944 19 C -0.107 4.107 20 C -0.157 4.157 21 C -0.054 4.054 22 Cl -0.094 7.094 23 H 0.082 0.918 24 H 0.045 0.955 25 H 0.037 0.963 26 H 0.031 0.969 27 H 0.049 0.951 28 H 0.042 0.958 29 H 0.295 0.705 30 H 0.114 0.886 31 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.269 -0.089 -8.392 8.488 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.237 6.237 3 C 0.030 3.970 4 C -0.032 4.032 5 C -0.327 4.327 6 C -0.095 4.095 7 C 0.171 3.829 8 C -0.526 4.526 9 H 0.121 0.879 10 C -0.181 4.181 11 N -0.420 5.420 12 Si 0.863 3.137 13 H -0.190 1.190 14 H -0.195 1.195 15 H -0.186 1.186 16 N -0.248 5.248 17 H 0.236 0.764 18 C -0.048 4.048 19 C -0.129 4.129 20 C -0.177 4.177 21 C -0.082 4.082 22 Cl -0.065 7.065 23 H 0.101 0.899 24 H 0.063 0.937 25 H 0.056 0.944 26 H 0.049 0.951 27 H 0.068 0.932 28 H 0.061 0.939 29 H 0.107 0.893 30 H 0.132 0.868 31 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -0.844 1.328 -8.154 8.305 hybrid contribution -0.330 -1.042 -0.094 1.097 sum -1.173 0.287 -8.249 8.337 Atomic orbital electron populations 1.22902 0.80795 1.01945 1.00218 1.85984 1.18697 1.24879 1.94097 1.17664 1.02427 0.87747 0.89178 1.18045 0.99348 0.92975 0.92788 1.18951 1.22334 1.02190 0.89274 1.19626 0.97270 0.93697 0.98947 1.18154 0.89425 0.84864 0.90435 1.20031 1.46301 0.97122 0.89166 0.87938 1.27057 0.92565 1.02406 0.96082 1.70471 1.27390 1.35323 1.08808 0.84179 0.77707 0.75805 0.75990 1.19049 1.19461 1.18612 1.43274 1.56454 1.20718 1.04389 0.76388 1.18115 1.05352 0.96207 0.85114 1.19737 1.04022 0.99810 0.89339 1.20019 1.05890 0.94561 0.97189 1.20738 1.07405 0.95279 0.84792 1.98280 1.93313 1.81786 1.33152 0.89902 0.93658 0.94413 0.95057 0.93227 0.93883 0.89350 0.86832 0.86038 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.58 11.13 101.05 1.12 1.71 16 2 O -0.32 -6.34 8.51 -18.99 -0.16 -6.50 16 3 C 0.08 1.58 5.78 -38.55 -0.22 1.36 16 4 C -0.03 -0.60 6.08 -106.79 -0.65 -1.25 16 5 C -0.32 -7.65 6.26 -103.32 -0.65 -8.30 16 6 C -0.04 -0.80 9.87 36.01 0.36 -0.44 16 7 C 0.28 6.74 6.36 -83.96 -0.53 6.20 16 8 C -0.49 -12.13 9.39 -38.26 -0.36 -12.48 16 9 H 0.10 2.58 7.44 -52.49 -0.39 2.19 16 10 C 0.04 0.98 5.52 -17.28 -0.10 0.89 16 11 N -0.80 -19.38 13.65 55.56 0.76 -18.62 16 12 Si 1.04 20.46 24.95 -169.99 -4.24 16.22 16 13 H -0.27 -5.08 7.11 56.52 0.40 -4.68 16 14 H -0.27 -4.88 6.75 56.52 0.38 -4.49 16 15 H -0.26 -5.03 6.85 56.52 0.39 -4.64 16 16 N -0.63 -14.17 5.00 -8.28 -0.04 -14.21 16 17 H 0.39 8.07 3.16 -40.82 -0.13 7.94 16 18 C 0.06 1.22 7.23 -83.67 -0.61 0.62 16 19 C -0.11 -2.01 10.05 -39.41 -0.40 -2.41 16 20 C -0.16 -2.80 9.79 -39.43 -0.39 -3.18 16 21 C -0.05 -1.03 6.32 -39.40 -0.25 -1.28 16 22 Cl -0.09 -1.56 28.47 -51.86 -1.48 -3.04 16 23 H 0.08 1.10 8.14 -51.93 -0.42 0.67 16 24 H 0.04 0.75 8.14 -51.93 -0.42 0.33 16 25 H 0.04 0.57 8.14 -51.93 -0.42 0.15 16 26 H 0.03 0.62 8.14 -51.93 -0.42 0.20 16 27 H 0.05 1.00 7.08 -51.93 -0.37 0.63 16 28 H 0.04 0.88 7.43 -51.93 -0.39 0.50 16 29 H 0.29 6.94 8.73 -40.82 -0.36 6.58 16 30 H 0.11 1.78 8.06 -52.49 -0.42 1.36 16 31 H 0.12 1.83 8.06 -52.49 -0.42 1.41 16 LS Contribution 277.59 15.07 4.18 4.18 Total: -1.00 -25.76 277.59 -6.64 -32.40 By element: Atomic # 1 Polarization: 11.15 SS G_CDS: -3.00 Total: 8.15 kcal Atomic # 6 Polarization: -15.92 SS G_CDS: -2.66 Total: -18.58 kcal Atomic # 7 Polarization: -33.55 SS G_CDS: 0.72 Total: -32.83 kcal Atomic # 8 Polarization: -6.34 SS G_CDS: -0.16 Total: -6.50 kcal Atomic # 14 Polarization: 20.46 SS G_CDS: -4.24 Total: 16.22 kcal Atomic # 17 Polarization: -1.56 SS G_CDS: -1.48 Total: -3.04 kcal Total LS contribution 4.18 Total: 4.18 kcal Total: -25.76 -6.64 -32.40 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260102178.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.760 kcal (2) G-P(sol) polarization free energy of solvation -25.764 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.997 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.639 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.403 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.643 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds