Wall clock time and date at job start Mon Mar 30 2020 06:40:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 N 1.39872 * 125.44526 * 2 1 4 4 C 1.30299 * 110.08497 * 180.26668 * 3 2 1 5 5 Cl 1.73600 * 126.11687 * 179.97438 * 4 3 2 6 6 C 1.46009 * 107.76579 * 0.02562 * 4 3 2 7 7 C 1.37045 * 125.45167 * 180.31876 * 2 1 3 8 8 C 1.39247 * 133.84167 * 359.72831 * 7 2 1 9 9 C 1.36628 * 119.84953 * 180.02562 * 8 7 2 10 10 C 1.38925 * 120.81035 * 0.02562 * 9 8 7 11 11 C 1.36502 * 120.63020 * 359.97438 * 10 9 8 12 12 C 1.50702 * 120.18419 * 179.97438 * 11 10 9 13 13 H 1.09000 * 109.47021 * 144.99851 * 12 11 10 14 14 N 1.46897 * 109.47138 * 24.99549 * 12 11 10 15 15 C 1.50705 * 109.46761 * 264.99511 * 12 11 10 16 16 H 1.07994 * 120.00286 * 0.02562 * 15 12 11 17 17 C 1.37878 * 119.99447 * 179.97438 * 15 12 11 18 18 N 1.31515 * 119.99296 * 180.02562 * 17 15 12 19 19 Si 1.86800 * 120.00409 * 359.97438 * 17 15 12 20 20 H 1.48499 * 109.46849 * 90.00084 * 19 17 15 21 21 H 1.48503 * 109.46919 * 210.00289 * 19 17 15 22 22 H 1.48493 * 109.46914 * 330.00247 * 19 17 15 23 23 H 1.09008 * 109.46974 * 269.68398 * 1 2 3 24 24 H 1.08996 * 109.47643 * 29.68499 * 1 2 3 25 25 H 1.09002 * 109.47287 * 149.69427 * 1 2 3 26 26 H 1.07995 * 120.07569 * 359.97438 * 8 7 2 27 27 H 1.07996 * 119.59751 * 180.02562 * 9 8 7 28 28 H 1.08001 * 119.68684 * 179.97438 * 10 9 8 29 29 H 1.00902 * 111.00211 * 300.00054 * 14 12 11 30 30 H 1.00904 * 111.00074 * 63.95414 * 14 12 11 31 31 H 0.96998 * 119.99659 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.2761 1.1395 0.0000 4 6 3.5326 0.7944 -0.0057 5 17 4.8907 1.8756 -0.0086 6 6 3.5939 -0.6644 -0.0105 7 6 2.2599 -1.1164 -0.0062 8 6 2.0012 -2.4846 -0.0091 9 6 3.0392 -3.3729 -0.0150 10 6 4.3557 -2.9290 -0.0178 11 6 4.6394 -1.5938 -0.0151 12 6 6.0711 -1.1234 -0.0176 13 1 6.1520 -0.2088 -0.6049 14 7 6.9266 -2.1616 -0.6076 15 6 6.5132 -0.8525 1.3975 16 1 5.8263 -1.0060 2.2166 17 6 7.7950 -0.4096 1.6463 18 7 8.1809 -0.1737 2.8812 19 14 8.9838 -0.1461 0.2297 20 1 8.8638 1.2492 -0.2641 21 1 10.3723 -0.3882 0.6973 22 1 8.6601 -1.0900 -0.8700 23 1 -0.3633 -0.0057 1.0277 24 1 -0.3634 0.8927 -0.5089 25 1 -0.3634 -0.8872 -0.5186 26 1 0.9824 -2.8428 -0.0057 27 1 2.8340 -4.4332 -0.0177 28 1 5.1623 -3.6472 -0.0221 29 1 6.8691 -3.0202 -0.0807 30 1 6.6920 -2.3158 -1.5768 31 1 9.0825 0.1382 3.0563 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260138380.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:40:46 Heat of formation + Delta-G solvation = 100.259705 kcal Electronic energy + Delta-G solvation = -17830.653232 eV Core-core repulsion = 14946.944345 eV Total energy + Delta-G solvation = -2883.708887 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.068 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -41.01666 -37.49674 -36.34577 -34.65868 -32.91476 -31.76646 -29.71590 -29.27797 -26.48095 -26.02179 -23.10486 -21.90194 -21.32019 -19.26023 -17.01357 -16.67458 -16.61536 -15.44085 -15.09003 -14.76698 -14.43555 -14.24610 -13.54318 -13.44693 -13.16751 -12.70699 -12.40164 -12.02076 -11.94542 -11.54101 -11.22156 -11.08640 -10.98367 -10.71499 -10.21115 -10.20077 -9.74654 -9.37794 -9.06916 -8.47976 -8.30467 -7.44146 -7.21418 -5.94635 -4.03609 1.24746 1.78092 1.85421 2.62681 3.01435 3.54106 3.64714 3.95621 4.14782 4.63122 4.75092 4.79620 5.11854 5.17383 5.30284 5.34531 5.37374 5.49651 5.66775 5.75302 5.96084 6.06664 6.26732 6.47299 6.69489 6.78894 7.08599 7.14680 7.28979 7.64424 7.72178 8.18376 8.35689 8.71665 9.05521 9.69469 11.15193 Molecular weight = 265.07amu Principal moments of inertia in cm(-1) A = 0.022900 B = 0.008371 C = 0.006832 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1222.410393 B = 3344.070662 C = 4097.162996 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.117 3.883 2 N -0.408 5.408 3 N -0.258 5.258 4 C 0.162 3.838 5 Cl 0.039 6.961 6 C -0.161 4.161 7 C 0.135 3.865 8 C -0.171 4.171 9 C -0.054 4.054 10 C -0.179 4.179 11 C 0.025 3.975 12 C 0.210 3.790 13 H 0.057 0.943 14 N -0.834 5.834 15 C -0.506 4.506 16 H 0.068 0.932 17 C 0.091 3.909 18 N -0.898 5.898 19 Si 0.855 3.145 20 H -0.296 1.296 21 H -0.304 1.304 22 H -0.190 1.190 23 H 0.067 0.933 24 H 0.085 0.915 25 H 0.082 0.918 26 H 0.119 0.881 27 H 0.124 0.876 28 H 0.125 0.875 29 H 0.331 0.669 30 H 0.309 0.691 31 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.086 -3.427 -8.368 15.907 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.025 4.025 2 N -0.199 5.199 3 N -0.075 5.075 4 C -0.040 4.040 5 Cl 0.066 6.934 6 C -0.170 4.170 7 C 0.022 3.978 8 C -0.194 4.194 9 C -0.075 4.075 10 C -0.199 4.199 11 C 0.020 3.980 12 C 0.100 3.900 13 H 0.075 0.925 14 N -0.364 5.364 15 C -0.544 4.544 16 H 0.087 0.913 17 C -0.113 4.113 18 N -0.535 5.535 19 Si 0.682 3.318 20 H -0.224 1.224 21 H -0.232 1.232 22 H -0.112 1.112 23 H 0.086 0.914 24 H 0.103 0.897 25 H 0.101 0.899 26 H 0.137 0.863 27 H 0.142 0.858 28 H 0.143 0.857 29 H 0.146 0.854 30 H 0.120 0.880 31 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -13.209 -1.807 -8.095 15.597 hybrid contribution 0.228 -0.738 -0.393 0.867 sum -12.982 -2.546 -8.488 15.718 Atomic orbital electron populations 1.21676 0.74117 1.03862 1.02807 1.47825 1.05275 1.00597 1.66210 1.76501 1.00949 1.08730 1.21318 1.23871 0.89180 0.90085 1.00856 1.98443 1.36356 1.62270 1.96282 1.19337 0.92964 0.90844 1.13816 1.18768 0.89915 0.89584 0.99575 1.19550 0.99494 0.88535 1.11787 1.20658 0.92333 0.98805 0.95661 1.20491 0.96331 0.95288 1.07818 1.20672 0.97740 0.91821 0.87777 1.18797 0.81792 0.91637 0.97744 0.92508 1.60072 1.58655 1.13033 1.04631 1.20492 0.98622 1.46324 0.89011 0.91350 1.24870 0.97910 0.92909 0.95621 1.69947 1.18811 1.44957 1.19826 0.87369 0.78583 0.79021 0.86820 1.22394 1.23161 1.11170 0.91443 0.89670 0.89908 0.86342 0.85843 0.85691 0.85441 0.87986 0.92866 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.12 1.21 11.40 59.85 0.68 1.90 16 2 N -0.41 -6.66 4.05 -65.47 -0.27 -6.92 16 3 N -0.26 -4.88 12.40 34.13 0.42 -4.46 16 4 C 0.16 3.31 8.05 -15.09 -0.12 3.19 16 5 Cl 0.04 0.78 27.16 -51.86 -1.41 -0.62 16 6 C -0.16 -3.26 6.15 -105.18 -0.65 -3.91 16 7 C 0.14 2.36 6.87 -84.17 -0.58 1.78 16 8 C -0.17 -2.49 9.97 -39.79 -0.40 -2.89 16 9 C -0.05 -0.78 9.96 -39.91 -0.40 -1.17 16 10 C -0.18 -3.07 9.22 -39.95 -0.37 -3.44 16 11 C 0.02 0.50 4.98 -104.63 -0.52 -0.03 16 12 C 0.21 4.68 1.90 -70.01 -0.13 4.55 16 13 H 0.06 1.32 5.75 -51.93 -0.30 1.02 16 14 N -0.83 -16.53 5.42 -6.65 -0.04 -16.57 16 15 C -0.51 -13.73 9.29 -34.44 -0.32 -14.05 16 16 H 0.07 2.10 7.98 -52.49 -0.42 1.68 16 17 C 0.09 2.59 5.47 -17.82 -0.10 2.49 16 18 N -0.90 -27.52 13.96 55.43 0.77 -26.75 16 19 Si 0.86 21.37 26.94 -169.99 -4.58 16.79 16 20 H -0.30 -7.54 7.11 56.52 0.40 -7.14 16 21 H -0.30 -7.86 7.11 56.52 0.40 -7.45 16 22 H -0.19 -4.34 5.16 56.52 0.29 -4.05 16 23 H 0.07 0.62 8.14 -51.92 -0.42 0.20 16 24 H 0.08 0.77 8.14 -51.93 -0.42 0.35 16 25 H 0.08 0.65 8.14 -51.93 -0.42 0.23 16 26 H 0.12 1.32 8.06 -52.49 -0.42 0.89 16 27 H 0.12 1.35 8.06 -52.49 -0.42 0.92 16 28 H 0.13 1.95 6.25 -52.49 -0.33 1.62 16 29 H 0.33 6.22 7.20 -39.29 -0.28 5.94 16 30 H 0.31 5.26 9.06 -39.29 -0.36 4.90 16 31 H 0.26 7.65 8.31 -40.82 -0.34 7.31 16 LS Contribution 277.65 15.07 4.18 4.18 Total: -1.00 -32.66 277.65 -6.85 -39.51 By element: Atomic # 1 Polarization: 9.46 SS G_CDS: -3.04 Total: 6.42 kcal Atomic # 6 Polarization: -8.68 SS G_CDS: -2.90 Total: -11.57 kcal Atomic # 7 Polarization: -55.59 SS G_CDS: 0.90 Total: -54.70 kcal Atomic # 14 Polarization: 21.37 SS G_CDS: -4.58 Total: 16.79 kcal Atomic # 17 Polarization: 0.78 SS G_CDS: -1.41 Total: -0.62 kcal Total LS contribution 4.18 Total: 4.18 kcal Total: -32.66 -6.85 -39.51 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260138380.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 139.770 kcal (2) G-P(sol) polarization free energy of solvation -32.662 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 107.108 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.848 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.510 kcal (6) G-S(sol) free energy of system = (1) + (5) 100.260 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds