Wall clock time and date at job start Mon Mar 30 2020 06:21:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.30594 * 1 3 3 Si 1.86803 * 119.99984 * 2 1 4 4 H 1.48498 * 109.47174 * 270.00027 * 3 2 1 5 5 H 1.48501 * 109.47062 * 29.99978 * 3 2 1 6 6 H 1.48504 * 109.46913 * 149.99777 * 3 2 1 7 7 C 1.40225 * 120.00126 * 179.97438 * 2 1 3 8 8 H 1.08002 * 119.99795 * 179.97438 * 7 2 1 9 9 C 1.41251 * 119.99672 * 0.27842 * 7 2 1 10 10 N 1.30633 * 123.22457 * 179.44914 * 9 7 2 11 11 C 1.47589 * 108.34081 * 179.22373 * 10 9 7 12 12 H 1.08990 * 110.69395 * 103.52571 * 11 10 9 13 13 C 1.52998 * 111.09341 * 227.07619 * 11 10 9 14 14 C 1.50696 * 109.47099 * 287.89092 * 13 11 10 15 15 C 1.38246 * 119.98762 * 269.72905 * 14 13 11 16 16 C 1.38213 * 120.01060 * 179.72236 * 15 14 13 17 17 C 1.38351 * 119.98962 * 0.55155 * 16 15 14 18 18 Cl 1.73596 * 120.01401 * 179.70204 * 17 16 15 19 19 C 1.38353 * 119.97040 * 359.72118 * 17 16 15 20 20 C 1.38215 * 119.98765 * 0.02562 * 19 17 16 21 21 C 1.54792 * 102.15674 * 345.38962 * 11 10 9 22 22 O 1.35192 * 123.22880 * 359.75181 * 9 7 2 23 23 H 0.96996 * 120.00284 * 0.02562 * 1 2 3 24 24 H 1.08997 * 109.47477 * 47.89433 * 13 11 10 25 25 H 1.09005 * 109.46706 * 167.89321 * 13 11 10 26 26 H 1.08003 * 119.99281 * 0.02562 * 15 14 13 27 27 H 1.08004 * 120.00572 * 180.27533 * 16 15 14 28 28 H 1.07998 * 120.00602 * 179.97438 * 19 17 16 29 29 H 1.08001 * 119.99220 * 180.02562 * 20 19 17 30 30 H 1.08997 * 111.01991 * 265.39085 * 21 11 10 31 31 H 1.09004 * 111.04608 * 141.52575 * 21 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3059 0.0000 0.0000 3 14 2.2400 1.6178 0.0000 4 1 2.4874 2.0465 -1.4001 5 1 1.4374 2.6527 0.7000 6 1 3.5375 1.4402 0.7001 7 6 2.0071 -1.2144 0.0005 8 1 3.0871 -1.2143 0.0001 9 6 1.3008 -2.4376 -0.0049 10 7 1.8893 -3.6038 -0.0152 11 6 0.8479 -4.6496 0.0010 12 1 0.7291 -5.0901 -0.9888 13 6 1.1651 -5.7265 1.0405 14 6 2.3207 -6.5650 0.5585 15 6 2.0843 -7.6986 -0.1967 16 6 3.1441 -8.4649 -0.6438 17 6 4.4412 -8.1037 -0.3259 18 17 5.7724 -9.0700 -0.8807 19 6 4.6769 -6.9723 0.4347 20 6 3.6166 -6.2039 0.8769 21 6 -0.4133 -3.8476 0.4037 22 8 -0.0490 -2.5137 -0.0058 23 1 -0.4850 0.8400 -0.0004 24 1 1.4295 -5.2524 1.9857 25 1 0.2907 -6.3612 1.1844 26 1 1.0714 -7.9827 -0.4415 27 1 2.9594 -9.3479 -1.2376 28 1 5.6892 -6.6901 0.6836 29 1 3.8005 -5.3204 1.4703 30 1 -0.5793 -3.8946 1.4799 31 1 -1.2903 -4.1979 -0.1406 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260476397.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:21:21 Heat of formation + Delta-G solvation = -12.747079 kcal Electronic energy + Delta-G solvation = -16964.755331 eV Core-core repulsion = 14043.853351 eV Total energy + Delta-G solvation = -2920.901980 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -39.51693 -38.80109 -36.37929 -33.84934 -33.15672 -30.89663 -30.76207 -29.36246 -26.32049 -25.09416 -22.56077 -21.52243 -20.58068 -19.36007 -17.27393 -16.82618 -15.61663 -15.18566 -15.05773 -14.77056 -14.22833 -13.66869 -13.39518 -13.26999 -13.21604 -12.68544 -12.13535 -11.68879 -11.62225 -11.39342 -11.27742 -10.96526 -10.87244 -10.79598 -10.60285 -10.52193 -10.15204 -10.07899 -9.21434 -8.76718 -8.24157 -8.18002 -7.56746 -6.77639 -4.76951 1.42651 1.57682 2.28302 2.96469 3.07584 3.12770 3.84513 3.91308 3.96358 4.93927 5.02402 5.09535 5.17993 5.26278 5.51991 5.64327 5.75894 5.86134 5.94493 5.98551 6.11951 6.17223 6.24627 6.28679 6.45117 6.56620 6.85107 6.86890 7.08163 7.12207 7.13536 7.76679 8.25793 8.60363 8.84043 9.91801 10.23681 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.028828 B = 0.004297 C = 0.003846 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 971.053440 B = 6515.156952 C = 7278.866433 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.776 5.776 2 C 0.079 3.921 3 Si 0.922 3.078 4 H -0.267 1.267 5 H -0.277 1.277 6 H -0.259 1.259 7 C -0.449 4.449 8 H 0.101 0.899 9 C 0.411 3.589 10 N -0.687 5.687 11 C 0.050 3.950 12 H 0.053 0.947 13 C -0.064 4.064 14 C -0.046 4.046 15 C -0.115 4.115 16 C -0.116 4.116 17 C -0.046 4.046 18 Cl -0.089 7.089 19 C -0.112 4.112 20 C -0.075 4.075 21 C 0.015 3.985 22 O -0.314 6.314 23 H 0.281 0.719 24 H 0.072 0.928 25 H 0.062 0.938 26 H 0.125 0.875 27 H 0.125 0.875 28 H 0.128 0.872 29 H 0.136 0.864 30 H 0.055 0.945 31 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.956 -10.815 1.463 11.307 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.403 5.403 2 C -0.144 4.144 3 Si 0.746 3.254 4 H -0.193 1.193 5 H -0.202 1.202 6 H -0.183 1.183 7 C -0.487 4.487 8 H 0.119 0.881 9 C 0.214 3.786 10 N -0.439 5.439 11 C -0.062 4.062 12 H 0.071 0.929 13 C -0.102 4.102 14 C -0.046 4.046 15 C -0.133 4.133 16 C -0.135 4.135 17 C -0.073 4.073 18 Cl -0.060 7.060 19 C -0.131 4.131 20 C -0.093 4.093 21 C -0.064 4.064 22 O -0.218 6.218 23 H 0.092 0.908 24 H 0.090 0.910 25 H 0.081 0.919 26 H 0.143 0.857 27 H 0.143 0.857 28 H 0.146 0.854 29 H 0.153 0.847 30 H 0.073 0.927 31 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 3.436 -11.060 1.343 11.659 hybrid contribution -0.475 0.626 -0.143 0.799 sum 2.961 -10.434 1.200 10.912 Atomic orbital electron populations 1.69745 1.07491 1.29280 1.33740 1.26077 0.94907 1.01741 0.91682 0.86086 0.80276 0.79708 0.79334 1.19253 1.20180 1.18282 1.18843 0.94546 0.86337 1.48970 0.88065 1.21937 0.78398 0.94111 0.84133 1.75628 1.24230 0.96190 1.47870 1.22981 0.91300 0.95873 0.96044 0.92907 1.20621 0.94567 0.95747 0.99274 1.19945 0.95393 0.93627 0.95635 1.20975 0.98544 0.95160 0.98644 1.20882 0.90696 1.00726 1.01150 1.20822 0.88348 0.95514 1.02585 1.98333 1.47569 1.71266 1.88855 1.21032 1.00080 0.93796 0.98193 1.21079 0.91240 0.98132 0.98884 1.24275 0.98603 0.84567 0.98944 1.87361 1.23739 1.28713 1.82023 0.90835 0.90970 0.91899 0.85668 0.85655 0.85441 0.84654 0.92656 0.90537 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.78 -20.37 11.82 55.56 0.66 -19.71 16 2 C 0.08 1.99 5.50 -17.33 -0.10 1.89 16 3 Si 0.92 18.56 29.56 -169.99 -5.02 13.54 16 4 H -0.27 -5.31 7.11 56.52 0.40 -4.91 16 5 H -0.28 -5.40 7.11 56.52 0.40 -4.99 16 6 H -0.26 -5.13 7.11 56.52 0.40 -4.73 16 7 C -0.45 -12.17 9.47 -37.69 -0.36 -12.53 16 8 H 0.10 2.67 7.85 -52.49 -0.41 2.26 16 9 C 0.41 11.29 7.37 -16.92 -0.12 11.17 16 10 N -0.69 -17.50 11.40 -53.13 -0.61 -18.11 16 11 C 0.05 1.06 3.68 -66.39 -0.24 0.81 16 12 H 0.05 1.14 8.14 -51.93 -0.42 0.71 16 13 C -0.06 -1.10 5.01 -27.89 -0.14 -1.24 16 14 C -0.05 -0.76 5.06 -104.62 -0.53 -1.29 16 15 C -0.11 -1.66 9.70 -39.59 -0.38 -2.05 16 16 C -0.12 -1.60 9.83 -39.55 -0.39 -1.99 16 17 C -0.05 -0.67 6.32 -39.50 -0.25 -0.92 16 18 Cl -0.09 -1.14 28.96 -51.86 -1.50 -2.64 16 19 C -0.11 -1.69 9.83 -39.55 -0.39 -2.08 16 20 C -0.08 -1.25 9.68 -39.59 -0.38 -1.63 16 21 C 0.01 0.31 7.70 38.10 0.29 0.61 16 22 O -0.31 -8.43 9.19 -17.27 -0.16 -8.59 16 23 H 0.28 6.64 8.29 -40.82 -0.34 6.30 16 24 H 0.07 1.29 8.08 -51.93 -0.42 0.87 16 25 H 0.06 0.90 8.08 -51.93 -0.42 0.48 16 26 H 0.13 1.54 8.06 -52.48 -0.42 1.12 16 27 H 0.13 1.44 8.06 -52.48 -0.42 1.02 16 28 H 0.13 1.69 8.06 -52.49 -0.42 1.27 16 29 H 0.14 2.34 8.06 -52.49 -0.42 1.92 16 30 H 0.06 1.11 7.92 -51.93 -0.41 0.70 16 31 H 0.08 1.42 8.14 -51.93 -0.42 1.00 16 LS Contribution 290.16 15.07 4.37 4.37 Total: -1.00 -28.79 290.16 -8.59 -37.38 By element: Atomic # 1 Polarization: 6.33 SS G_CDS: -3.33 Total: 3.00 kcal Atomic # 6 Polarization: -6.25 SS G_CDS: -2.99 Total: -9.24 kcal Atomic # 7 Polarization: -37.87 SS G_CDS: 0.05 Total: -37.82 kcal Atomic # 8 Polarization: -8.43 SS G_CDS: -0.16 Total: -8.59 kcal Atomic # 14 Polarization: 18.56 SS G_CDS: -5.02 Total: 13.54 kcal Atomic # 17 Polarization: -1.14 SS G_CDS: -1.50 Total: -2.64 kcal Total LS contribution 4.37 Total: 4.37 kcal Total: -28.79 -8.59 -37.38 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260476397.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 24.628 kcal (2) G-P(sol) polarization free energy of solvation -28.788 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.160 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.587 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.375 kcal (6) G-S(sol) free energy of system = (1) + (5) -12.747 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds