Wall clock time and date at job start Mon Mar 30 2020 06:40:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 N 1.39867 * 125.45355 * 2 1 4 4 C 1.30302 * 110.08118 * 179.97438 * 3 2 1 5 5 Cl 1.73602 * 126.12066 * 180.02562 * 4 3 2 6 6 C 1.46005 * 107.76055 * 0.02562 * 4 3 2 7 7 C 1.39925 * 134.02563 * 179.97438 * 6 4 3 8 8 C 1.36470 * 119.63982 * 180.02562 * 7 6 4 9 9 C 1.50694 * 119.69162 * 180.02562 * 8 7 6 10 10 H 1.09001 * 109.47094 * 339.99522 * 9 8 7 11 11 N 1.46900 * 109.47042 * 220.00256 * 9 8 7 12 12 C 1.50694 * 109.47250 * 100.00187 * 9 8 7 13 13 H 1.07997 * 120.00382 * 359.97438 * 12 9 8 14 14 C 1.37883 * 120.00260 * 180.02562 * 12 9 8 15 15 N 1.31504 * 120.00284 * 179.97438 * 14 12 9 16 16 Si 1.86800 * 119.99615 * 359.97438 * 14 12 9 17 17 H 1.48505 * 109.47279 * 89.99889 * 16 14 12 18 18 H 1.48497 * 109.47182 * 210.00124 * 16 14 12 19 19 H 1.48501 * 109.47438 * 329.99934 * 16 14 12 20 20 C 1.38970 * 120.62332 * 359.93763 * 8 7 6 21 21 C 1.36594 * 120.81341 * 0.09514 * 20 8 7 22 22 C 1.37044 * 125.44866 * 179.97438 * 2 1 3 23 23 H 1.09003 * 109.46611 * 270.04339 * 1 2 3 24 24 H 1.09003 * 109.46864 * 30.03848 * 1 2 3 25 25 H 1.08995 * 109.47311 * 150.04115 * 1 2 3 26 26 H 1.08003 * 120.18063 * 359.76339 * 7 6 4 27 27 H 1.00898 * 111.00149 * 299.99296 * 11 9 8 28 28 H 1.00897 * 111.00293 * 63.95304 * 11 9 8 29 29 H 0.96997 * 120.00203 * 179.97438 * 15 14 12 30 30 H 1.07998 * 119.59262 * 180.02562 * 20 8 7 31 31 H 1.08000 * 120.07290 * 179.91324 * 21 20 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.2763 1.1393 0.0000 4 6 3.5327 0.7939 0.0005 5 17 4.8912 1.8748 0.0014 6 6 3.5935 -0.6649 0.0003 7 6 4.6393 -1.5945 0.0002 8 6 4.3556 -2.9294 -0.0005 9 6 5.4809 -3.9317 -0.0001 10 1 6.3948 -3.4521 -0.3507 11 7 5.1416 -5.0493 -0.8911 12 6 5.6909 -4.4506 1.3991 13 1 5.0717 -4.0904 2.2072 14 6 6.6742 -5.3846 1.6477 15 7 6.8578 -5.8371 2.8687 16 14 7.7458 -6.0072 0.2500 17 1 8.9463 -5.1422 0.1234 18 1 8.1684 -7.4022 0.5338 19 1 6.9745 -5.9721 -1.0186 20 6 3.0387 -3.3733 0.0001 21 6 2.0009 -2.4851 -0.0004 22 6 2.2598 -1.1164 0.0005 23 1 -0.3633 0.0008 1.0277 24 1 -0.3633 0.8897 -0.5145 25 1 -0.3634 -0.8903 -0.5132 26 1 5.6654 -1.2575 -0.0035 27 1 4.2974 -5.5107 -0.5870 28 1 5.0591 -4.7373 -1.8471 29 1 7.5493 -6.4944 3.0436 30 1 2.8332 -4.4335 -0.0001 31 1 0.9821 -2.8432 -0.0013 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260516517.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:40:52 Heat of formation + Delta-G solvation = 94.957269 kcal Electronic energy + Delta-G solvation = -17266.586903 eV Core-core repulsion = 14382.648085 eV Total energy + Delta-G solvation = -2883.938818 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.068 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -41.15285 -37.77073 -36.80449 -34.25459 -33.27409 -31.77219 -30.22117 -29.17252 -26.74786 -25.87140 -22.88861 -22.58911 -20.66833 -20.05433 -17.18894 -16.87807 -16.35894 -15.63168 -15.14791 -14.86172 -14.50189 -14.00528 -13.79902 -13.58247 -13.37324 -12.86800 -12.42645 -12.23201 -11.97317 -11.74596 -11.56084 -11.30296 -10.94291 -10.74129 -10.50260 -10.20077 -9.95112 -9.60237 -9.21508 -8.53523 -8.42503 -7.51164 -7.21515 -5.99864 -4.10368 1.08887 1.39440 1.81208 2.42392 2.75666 3.52076 3.62587 3.93037 4.10066 4.44642 4.66969 4.71214 4.99913 5.06553 5.25248 5.28722 5.35013 5.42966 5.58945 5.79024 5.90383 6.09416 6.17554 6.35526 6.69222 6.75897 6.97046 7.19764 7.20113 7.51773 7.60528 8.15377 8.32409 8.68874 9.00865 9.64206 11.09782 Molecular weight = 265.07amu Principal moments of inertia in cm(-1) A = 0.024205 B = 0.005725 C = 0.005038 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1156.504160 B = 4889.499456 C = 5556.598939 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.115 3.885 2 N -0.403 5.403 3 N -0.247 5.247 4 C 0.139 3.861 5 Cl 0.014 6.986 6 C -0.161 4.161 7 C -0.043 4.043 8 C -0.098 4.098 9 C 0.222 3.778 10 H 0.047 0.953 11 N -0.834 5.834 12 C -0.521 4.521 13 H 0.069 0.931 14 C 0.085 3.915 15 N -0.899 5.899 16 Si 0.866 3.134 17 H -0.297 1.297 18 H -0.305 1.305 19 H -0.192 1.192 20 C -0.050 4.050 21 C -0.147 4.147 22 C 0.120 3.880 23 H 0.069 0.931 24 H 0.085 0.915 25 H 0.085 0.915 26 H 0.128 0.872 27 H 0.329 0.671 28 H 0.309 0.691 29 H 0.263 0.737 30 H 0.130 0.870 31 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.824 10.320 -8.547 17.226 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.026 4.026 2 N -0.195 5.195 3 N -0.064 5.064 4 C -0.063 4.063 5 Cl 0.042 6.958 6 C -0.169 4.169 7 C -0.064 4.064 8 C -0.102 4.102 9 C 0.113 3.887 10 H 0.064 0.936 11 N -0.363 5.363 12 C -0.559 4.559 13 H 0.087 0.913 14 C -0.119 4.119 15 N -0.536 5.536 16 Si 0.693 3.307 17 H -0.224 1.224 18 H -0.232 1.232 19 H -0.113 1.113 20 C -0.071 4.071 21 C -0.169 4.169 22 C 0.007 3.993 23 H 0.087 0.913 24 H 0.104 0.896 25 H 0.104 0.896 26 H 0.146 0.854 27 H 0.143 0.857 28 H 0.120 0.880 29 H 0.072 0.928 30 H 0.148 0.852 31 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges -10.918 10.949 -8.222 17.512 hybrid contribution 0.260 -0.225 -0.393 0.523 sum -10.657 10.724 -8.615 17.401 Atomic orbital electron populations 1.21728 0.73822 1.04064 1.03003 1.47792 1.05326 1.00410 1.65938 1.76412 1.00841 1.09367 1.19814 1.23686 0.89079 0.89439 1.04081 1.98389 1.37650 1.63001 1.96790 1.19465 0.93909 0.90260 1.13313 1.20263 0.97579 0.91486 0.97033 1.20819 0.96572 0.95036 0.97736 1.18556 0.90176 0.85642 0.94340 0.93554 1.60068 1.41231 1.30801 1.04234 1.20731 1.19267 1.25239 0.90664 0.91251 1.24988 0.96508 0.94723 0.95678 1.69953 1.32922 1.30145 1.20604 0.87221 0.79164 0.76541 0.87823 1.22448 1.23222 1.11300 1.20690 0.91766 0.99537 0.95121 1.19713 0.99776 0.88400 1.08989 1.18660 0.89567 0.89535 1.01512 0.91270 0.89630 0.89613 0.85375 0.85717 0.88027 0.92789 0.85175 0.86042 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.12 1.07 11.40 59.85 0.68 1.75 16 2 N -0.40 -5.86 4.05 -65.47 -0.27 -6.13 16 3 N -0.25 -3.97 12.40 34.13 0.42 -3.55 16 4 C 0.14 2.28 8.09 -15.09 -0.12 2.15 16 5 Cl 0.01 0.19 29.33 -51.86 -1.52 -1.33 16 6 C -0.16 -2.81 6.37 -105.18 -0.67 -3.48 16 7 C -0.04 -0.78 9.66 -39.59 -0.38 -1.16 16 8 C -0.10 -1.85 4.85 -104.99 -0.51 -2.36 16 9 C 0.22 4.77 2.33 -70.02 -0.16 4.61 16 10 H 0.05 1.03 7.40 -51.93 -0.38 0.64 16 11 N -0.83 -15.91 5.66 -6.65 -0.04 -15.95 16 12 C -0.52 -13.99 9.28 -34.44 -0.32 -14.31 16 13 H 0.07 2.08 7.98 -52.49 -0.42 1.66 16 14 C 0.09 2.41 5.47 -17.82 -0.10 2.31 16 15 N -0.90 -27.38 13.96 55.43 0.77 -26.61 16 16 Si 0.87 21.05 26.94 -169.99 -4.58 16.47 16 17 H -0.30 -7.38 7.11 56.52 0.40 -6.98 16 18 H -0.30 -7.69 7.11 56.52 0.40 -7.29 16 19 H -0.19 -4.24 5.17 56.52 0.29 -3.95 16 20 C -0.05 -0.84 9.20 -39.90 -0.37 -1.20 16 21 C -0.15 -2.18 9.96 -39.78 -0.40 -2.58 16 22 C 0.12 1.93 6.87 -84.17 -0.58 1.35 16 23 H 0.07 0.57 8.14 -51.93 -0.42 0.14 16 24 H 0.08 0.67 8.14 -51.93 -0.42 0.25 16 25 H 0.09 0.61 8.13 -51.93 -0.42 0.19 16 26 H 0.13 2.23 8.01 -52.48 -0.42 1.81 16 27 H 0.33 5.94 7.30 -39.29 -0.29 5.65 16 28 H 0.31 5.05 9.06 -39.29 -0.36 4.69 16 29 H 0.26 7.59 8.31 -40.82 -0.34 7.25 16 30 H 0.13 2.01 6.62 -52.49 -0.35 1.66 16 31 H 0.12 1.41 8.06 -52.49 -0.42 0.99 16 LS Contribution 282.36 15.07 4.26 4.26 Total: -1.00 -32.00 282.36 -7.02 -39.03 By element: Atomic # 1 Polarization: 9.87 SS G_CDS: -3.15 Total: 6.72 kcal Atomic # 6 Polarization: -9.99 SS G_CDS: -2.92 Total: -12.91 kcal Atomic # 7 Polarization: -53.13 SS G_CDS: 0.89 Total: -52.23 kcal Atomic # 14 Polarization: 21.05 SS G_CDS: -4.58 Total: 16.47 kcal Atomic # 17 Polarization: 0.19 SS G_CDS: -1.52 Total: -1.33 kcal Total LS contribution 4.26 Total: 4.26 kcal Total: -32.00 -7.02 -39.03 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260516517.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 133.984 kcal (2) G-P(sol) polarization free energy of solvation -32.004 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 101.981 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.023 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.027 kcal (6) G-S(sol) free energy of system = (1) + (5) 94.957 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds