Wall clock time and date at job start Mon Mar 30 2020 06:23:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.30603 * 1 3 3 Si 1.86794 * 119.99769 * 2 1 4 4 H 1.48494 * 109.47340 * 270.00387 * 3 2 1 5 5 H 1.48505 * 109.47080 * 30.00075 * 3 2 1 6 6 H 1.48498 * 109.47404 * 149.99984 * 3 2 1 7 7 C 1.40212 * 120.00185 * 180.02562 * 2 1 3 8 8 H 1.07997 * 119.99997 * 179.97438 * 7 2 1 9 9 C 1.41263 * 120.00264 * 359.97438 * 7 2 1 10 10 N 1.30635 * 123.22099 * 0.02562 * 9 7 2 11 11 C 1.47586 * 108.33498 * 180.60451 * 10 9 7 12 12 C 1.54787 * 102.10971 * 14.98814 * 11 10 9 13 13 H 1.09000 * 111.04578 * 94.39989 * 12 11 10 14 14 C 1.52992 * 111.01787 * 218.27356 * 12 11 10 15 15 C 1.50700 * 109.46800 * 178.57761 * 14 12 11 16 16 C 1.38263 * 119.99222 * 90.00528 * 15 14 12 17 17 C 1.38224 * 120.02332 * 180.02562 * 16 15 14 18 18 C 1.38236 * 120.01528 * 359.97438 * 17 16 15 19 19 C 1.38335 * 119.98682 * 359.97438 * 18 17 16 20 20 Cl 1.73599 * 120.01202 * 180.02562 * 19 18 17 21 21 C 1.38198 * 119.99438 * 270.27308 * 15 14 12 22 22 O 1.35193 * 123.22970 * 179.97438 * 9 7 2 23 23 H 0.97001 * 120.00733 * 359.97438 * 1 2 3 24 24 H 1.09002 * 110.90668 * 256.78526 * 11 10 9 25 25 H 1.09005 * 110.90356 * 133.19174 * 11 10 9 26 26 H 1.08996 * 109.47220 * 58.57891 * 14 12 11 27 27 H 1.08998 * 109.47447 * 298.57417 * 14 12 11 28 28 H 1.07991 * 119.99092 * 0.02562 * 16 15 14 29 29 H 1.08003 * 119.99263 * 179.97438 * 17 16 15 30 30 H 1.08003 * 120.00765 * 179.97438 * 18 17 16 31 31 H 1.08000 * 120.00364 * 359.97438 * 21 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3060 0.0000 0.0000 3 14 2.2399 1.6177 0.0000 4 1 2.4874 2.0465 -1.4000 5 1 1.4373 2.6527 0.7001 6 1 3.5375 1.4403 0.7000 7 6 2.0071 -1.2143 -0.0005 8 1 3.0871 -1.2142 -0.0010 9 6 1.3009 -2.4377 -0.0005 10 7 -0.0034 -2.5112 -0.0005 11 6 -0.3881 -3.9359 0.0142 12 6 0.9385 -4.6263 0.4137 13 1 0.9849 -4.7918 1.4901 14 6 1.1250 -5.9394 -0.3490 15 6 2.4405 -6.5635 0.0397 16 6 2.5005 -7.4424 1.1053 17 6 3.7069 -8.0147 1.4627 18 6 4.8540 -7.7091 0.7545 19 6 4.7944 -6.8305 -0.3124 20 17 6.2345 -6.4467 -1.2027 21 6 3.5877 -6.2528 -0.6656 22 8 1.9099 -3.6447 -0.0016 23 1 -0.4851 0.8400 0.0004 24 1 -0.7136 -4.2612 -0.9739 25 1 -1.1628 -4.1219 0.7582 26 1 1.1196 -5.7410 -1.4207 27 1 0.3120 -6.6220 -0.1017 28 1 1.6046 -7.6819 1.6586 29 1 3.7532 -8.7009 2.2954 30 1 5.7966 -8.1560 1.0341 31 1 3.5414 -5.5632 -1.4955 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260738239.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:23:48 Heat of formation + Delta-G solvation = -4.760550 kcal Electronic energy + Delta-G solvation = -17111.084152 eV Core-core repulsion = 14190.528494 eV Total energy + Delta-G solvation = -2920.555659 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.21 seconds Orbital eigenvalues (eV) -39.71498 -38.85508 -36.40058 -33.83804 -32.97596 -31.33799 -30.64644 -29.42796 -26.91633 -24.32034 -22.59686 -21.59426 -20.82433 -19.79437 -16.94749 -16.72640 -15.81773 -15.44287 -15.25689 -14.91690 -14.26694 -13.72133 -13.65356 -13.32020 -13.01617 -12.41334 -12.01824 -11.92694 -11.54454 -11.45367 -11.36023 -11.21487 -11.07089 -10.86305 -10.68578 -10.45124 -10.25442 -9.98989 -9.13709 -8.77387 -8.58804 -7.78981 -7.36608 -6.41037 -4.62958 1.23529 1.37080 2.21609 3.08970 3.17063 3.21128 3.69826 4.01299 4.14546 4.67880 4.80488 4.91962 5.11764 5.29770 5.34540 5.41052 5.52836 5.68282 5.77648 5.87017 5.92092 6.11585 6.26998 6.31973 6.36492 6.56282 6.65725 6.83133 6.86487 6.95143 7.36133 7.77735 8.23439 8.79679 8.99444 10.12167 10.50173 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.021111 B = 0.005326 C = 0.004472 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1325.994050 B = 5255.972250 C = 6259.210676 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.734 5.734 2 C 0.078 3.922 3 Si 0.916 3.084 4 H -0.270 1.270 5 H -0.277 1.277 6 H -0.263 1.263 7 C -0.451 4.451 8 H 0.082 0.918 9 C 0.375 3.625 10 N -0.600 5.600 11 C 0.008 3.992 12 C 0.054 3.946 13 H 0.066 0.934 14 C -0.073 4.073 15 C -0.056 4.056 16 C -0.117 4.117 17 C -0.111 4.111 18 C -0.122 4.122 19 C -0.032 4.032 20 Cl -0.078 7.078 21 C -0.088 4.088 22 O -0.365 6.365 23 H 0.272 0.728 24 H 0.045 0.955 25 H 0.056 0.944 26 H 0.080 0.920 27 H 0.086 0.914 28 H 0.126 0.874 29 H 0.128 0.872 30 H 0.128 0.872 31 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.149 -13.105 0.954 14.507 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.359 5.359 2 C -0.146 4.146 3 Si 0.740 3.260 4 H -0.195 1.195 5 H -0.203 1.203 6 H -0.187 1.187 7 C -0.489 4.489 8 H 0.101 0.899 9 C 0.175 3.825 10 N -0.347 5.347 11 C -0.123 4.123 12 C -0.005 4.005 13 H 0.084 0.916 14 C -0.111 4.111 15 C -0.057 4.057 16 C -0.135 4.135 17 C -0.129 4.129 18 C -0.141 4.141 19 C -0.059 4.059 20 Cl -0.049 7.049 21 C -0.107 4.107 22 O -0.273 6.273 23 H 0.083 0.917 24 H 0.063 0.937 25 H 0.075 0.925 26 H 0.099 0.901 27 H 0.104 0.896 28 H 0.144 0.856 29 H 0.146 0.854 30 H 0.146 0.854 31 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 5.515 -12.604 0.809 13.782 hybrid contribution 0.898 0.068 0.034 0.901 sum 6.413 -12.536 0.843 14.107 Atomic orbital electron populations 1.70020 1.06978 1.27665 1.31225 1.25735 0.94827 1.00396 0.93667 0.86204 0.80173 0.80556 0.79073 1.19519 1.20256 1.18664 1.18549 0.93964 0.86579 1.49800 0.89935 1.22005 0.88067 0.83812 0.88583 1.76256 1.09091 1.07615 1.41715 1.23843 0.95295 0.94514 0.98687 1.23703 0.91124 0.88447 0.97262 0.91568 1.20745 0.93512 0.95360 1.01447 1.19865 0.95382 0.95463 0.94946 1.21146 0.98231 0.97219 0.96891 1.21012 0.92066 1.00211 0.99610 1.20964 0.99334 0.98605 0.95166 1.20906 0.88000 1.00547 0.96398 1.98357 1.37917 1.93602 1.74994 1.21019 0.90300 0.98506 1.00870 1.86959 1.39460 1.17183 1.83736 0.91707 0.93691 0.92529 0.90108 0.89595 0.85600 0.85404 0.85397 0.84672 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.73 -20.59 11.74 55.56 0.65 -19.94 16 2 C 0.08 2.07 5.50 -17.33 -0.10 1.98 16 3 Si 0.92 19.49 29.56 -169.99 -5.02 14.47 16 4 H -0.27 -5.63 7.11 56.52 0.40 -5.23 16 5 H -0.28 -5.73 7.11 56.52 0.40 -5.33 16 6 H -0.26 -5.49 7.11 56.52 0.40 -5.08 16 7 C -0.45 -12.71 9.50 -37.69 -0.36 -13.07 16 8 H 0.08 2.21 7.85 -52.49 -0.41 1.80 16 9 C 0.38 10.66 7.43 -16.91 -0.13 10.53 16 10 N -0.60 -17.14 9.69 -59.53 -0.58 -17.72 16 11 C 0.01 0.17 7.68 -2.51 -0.02 0.16 16 12 C 0.05 1.11 3.71 -25.79 -0.10 1.01 16 13 H 0.07 1.34 8.14 -51.93 -0.42 0.91 16 14 C -0.07 -1.16 5.07 -27.89 -0.14 -1.30 16 15 C -0.06 -0.85 5.01 -104.63 -0.52 -1.38 16 16 C -0.12 -1.50 9.70 -39.58 -0.38 -1.89 16 17 C -0.11 -1.28 10.05 -39.59 -0.40 -1.68 16 18 C -0.12 -1.51 9.83 -39.55 -0.39 -1.90 16 19 C -0.03 -0.46 6.32 -39.50 -0.25 -0.71 16 20 Cl -0.08 -1.05 28.96 -51.86 -1.50 -2.56 16 21 C -0.09 -1.40 9.32 -39.55 -0.37 -1.77 16 22 O -0.36 -9.18 10.59 -17.27 -0.18 -9.36 16 23 H 0.27 6.91 8.29 -40.82 -0.34 6.57 16 24 H 0.04 0.98 7.91 -51.93 -0.41 0.57 16 25 H 0.06 1.21 8.14 -51.93 -0.42 0.79 16 26 H 0.08 1.31 8.09 -51.93 -0.42 0.89 16 27 H 0.09 1.11 8.09 -51.93 -0.42 0.69 16 28 H 0.13 1.35 8.06 -52.49 -0.42 0.92 16 29 H 0.13 1.10 8.06 -52.48 -0.42 0.68 16 30 H 0.13 1.30 8.06 -52.48 -0.42 0.88 16 31 H 0.14 2.26 8.06 -52.49 -0.42 1.83 16 LS Contribution 289.71 15.07 4.37 4.37 Total: -1.00 -31.12 289.71 -8.75 -39.87 By element: Atomic # 1 Polarization: 4.23 SS G_CDS: -3.33 Total: 0.89 kcal Atomic # 6 Polarization: -6.88 SS G_CDS: -3.15 Total: -10.02 kcal Atomic # 7 Polarization: -37.73 SS G_CDS: 0.08 Total: -37.66 kcal Atomic # 8 Polarization: -9.18 SS G_CDS: -0.18 Total: -9.36 kcal Atomic # 14 Polarization: 19.49 SS G_CDS: -5.02 Total: 14.47 kcal Atomic # 17 Polarization: -1.05 SS G_CDS: -1.50 Total: -2.56 kcal Total LS contribution 4.37 Total: 4.37 kcal Total: -31.12 -8.75 -39.87 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260738239.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 35.112 kcal (2) G-P(sol) polarization free energy of solvation -31.123 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.989 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.750 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.873 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.761 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.21 seconds