Wall clock time and date at job start Mon Mar 30 2020 06:43:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13596 * 1 3 3 C 1.43197 * 179.97438 * 2 1 4 4 C 1.39642 * 120.11443 * 242.24660 * 3 2 1 5 5 C 1.38185 * 119.93421 * 180.02562 * 4 3 2 6 6 F 1.35095 * 119.92282 * 179.97438 * 5 4 3 7 7 C 1.38502 * 120.16162 * 359.93410 * 5 4 3 8 8 C 1.38775 * 120.22711 * 0.02810 * 7 5 4 9 9 O 1.35905 * 119.96862 * 179.97438 * 8 7 5 10 10 C 1.42897 * 117.00015 * 0.02562 * 9 8 7 11 11 C 1.53006 * 109.47187 * 179.97438 * 10 9 8 12 12 O 1.42904 * 109.46747 * 64.99725 * 11 10 9 13 13 C 1.42902 * 113.99344 * 179.97438 * 12 11 10 14 14 C 1.50702 * 109.46948 * 180.02562 * 13 12 11 15 15 H 1.08007 * 119.99614 * 0.02562 * 14 13 12 16 16 C 1.37874 * 120.00492 * 180.02562 * 14 13 12 17 17 N 1.31515 * 119.99777 * 0.02562 * 16 14 13 18 18 Si 1.86801 * 120.00242 * 180.02562 * 16 14 13 19 19 H 1.48495 * 109.46780 * 60.00332 * 18 16 14 20 20 H 1.48501 * 109.46765 * 180.02562 * 18 16 14 21 21 H 1.48498 * 109.46875 * 300.00040 * 18 16 14 22 22 C 1.38495 * 120.06529 * 0.02562 * 8 7 5 23 23 H 1.08003 * 120.03069 * 0.05171 * 4 3 2 24 24 H 1.07997 * 119.89114 * 180.02562 * 7 5 4 25 25 H 1.08997 * 109.47017 * 299.99636 * 10 9 8 26 26 H 1.08997 * 109.47594 * 59.99819 * 10 9 8 27 27 H 1.08995 * 109.47086 * 184.99396 * 11 10 9 28 28 H 1.09001 * 109.46972 * 305.00109 * 11 10 9 29 29 H 1.08992 * 109.47616 * 300.00153 * 13 12 11 30 30 H 1.09004 * 109.47132 * 60.00873 * 13 12 11 31 31 H 0.97003 * 120.00235 * 179.97438 * 17 16 14 32 32 H 1.08003 * 120.08301 * 179.70934 * 22 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5679 0.0006 0.0000 4 6 3.2683 0.5634 1.0690 5 6 4.6501 0.5625 1.0649 6 9 5.3275 1.1075 2.0989 7 6 5.3425 0.0034 0.0036 8 6 4.6533 -0.5584 -1.0618 9 8 5.3380 -1.1051 -2.1007 10 6 6.7646 -1.0669 -2.0293 11 6 7.3557 -1.7248 -3.2778 12 8 7.0140 -0.9520 -4.4304 13 6 7.5207 -1.4824 -5.6567 14 6 7.1033 -0.5928 -6.7993 15 1 6.5106 0.2896 -6.6079 16 6 7.4778 -0.9053 -8.0888 17 7 8.1991 -1.9800 -8.3219 18 14 6.9609 0.1978 -9.5050 19 1 7.5064 1.5627 -9.2937 20 1 7.4864 -0.3541 -10.7795 21 1 5.4786 0.2612 -9.5673 22 6 3.2683 -0.5616 -1.0680 23 1 2.7305 0.9987 1.8983 24 1 6.4225 0.0047 0.0051 25 1 7.0979 -0.0307 -1.9718 26 1 7.0986 -1.6056 -1.1426 27 1 8.4403 -1.7754 -3.1829 28 1 6.9526 -2.7320 -3.3832 29 1 8.6088 -1.5278 -5.6109 30 1 7.1214 -2.4848 -5.8116 31 1 8.4624 -2.2001 -9.2292 32 1 2.7316 -0.9946 -1.8992 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000292582343.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:43:14 Heat of formation + Delta-G solvation = -77.522610 kcal Electronic energy + Delta-G solvation = -18271.364260 eV Core-core repulsion = 14919.317026 eV Total energy + Delta-G solvation = -3352.047233 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 265.090 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -49.27776 -40.43493 -38.24433 -36.78133 -36.23898 -32.83046 -31.44545 -31.09869 -29.41071 -27.00312 -24.82143 -22.97417 -22.51402 -22.14091 -19.81749 -17.47331 -16.90941 -16.58695 -16.47943 -16.37572 -16.27394 -15.91291 -15.06456 -14.68392 -14.45702 -14.24597 -14.08021 -13.81397 -13.60286 -13.12038 -12.64054 -12.39744 -12.18610 -12.07704 -11.81150 -11.43418 -11.15305 -10.85687 -10.83688 -10.65451 -10.10146 -9.31532 -9.19024 -8.93148 -8.61495 -8.26624 -6.15410 -4.17474 0.24987 0.83554 2.26993 2.52659 2.88469 3.30365 3.33195 3.36972 3.40484 3.49389 3.90314 4.27365 4.48707 4.56389 4.62740 4.64076 4.75055 4.98762 5.21334 5.23563 5.41771 5.55772 5.70049 5.73910 5.77860 5.81329 5.97641 6.20619 6.98911 7.10038 7.15205 7.34420 7.73893 8.07782 8.46117 8.94459 9.47578 10.96045 Molecular weight = 265.09amu Principal moments of inertia in cm(-1) A = 0.022524 B = 0.003494 C = 0.003194 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1242.831165 B = 8011.815761 C = 8765.691825 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.404 5.404 2 C 0.259 3.741 3 C 0.041 3.959 4 C -0.154 4.154 5 C 0.143 3.857 6 F -0.131 7.131 7 C -0.224 4.224 8 C 0.173 3.827 9 O -0.286 6.286 10 C 0.060 3.940 11 C 0.061 3.939 12 O -0.390 6.390 13 C 0.195 3.805 14 C -0.517 4.517 15 H 0.067 0.933 16 C 0.057 3.943 17 N -0.899 5.899 18 Si 0.909 3.091 19 H -0.274 1.274 20 H -0.286 1.286 21 H -0.274 1.274 22 C -0.114 4.114 23 H 0.145 0.855 24 H 0.150 0.850 25 H 0.075 0.925 26 H 0.075 0.925 27 H 0.064 0.936 28 H 0.051 0.949 29 H 0.006 0.994 30 H 0.008 0.992 31 H 0.265 0.735 32 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.352 2.194 19.242 19.850 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.079 5.079 2 C -0.057 4.057 3 C 0.037 3.963 4 C -0.176 4.176 5 C 0.123 3.877 6 F -0.109 7.109 7 C -0.244 4.244 8 C 0.125 3.875 9 O -0.198 6.198 10 C -0.014 4.014 11 C -0.016 4.016 12 O -0.310 6.310 13 C 0.121 3.879 14 C -0.555 4.555 15 H 0.085 0.915 16 C -0.144 4.144 17 N -0.538 5.538 18 Si 0.736 3.264 19 H -0.200 1.200 20 H -0.211 1.211 21 H -0.199 1.199 22 C -0.136 4.136 23 H 0.163 0.837 24 H 0.167 0.833 25 H 0.093 0.907 26 H 0.093 0.907 27 H 0.082 0.918 28 H 0.070 0.930 29 H 0.024 0.976 30 H 0.025 0.975 31 H 0.075 0.925 32 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges -6.167 2.179 18.939 20.036 hybrid contribution 0.829 0.386 -0.508 1.046 sum -5.338 2.566 18.431 19.359 Atomic orbital electron populations 1.81279 1.11796 1.07670 1.07147 1.25351 0.92245 0.94103 0.94008 1.15226 0.84431 1.01241 0.95398 1.20883 0.92304 1.04356 1.00054 1.16990 0.89210 0.96184 0.85267 1.91543 1.80041 1.83218 1.56119 1.21469 1.02061 1.05787 0.95075 1.18503 0.91202 0.91191 0.86555 1.86320 1.20954 1.73408 1.39144 1.23140 0.77167 1.02324 0.98801 1.22288 0.97688 0.95262 0.86387 1.87922 1.77285 1.50707 1.15116 1.20236 0.93387 0.94627 0.79634 1.21008 1.33953 1.10236 0.90342 0.91519 1.24942 0.95016 0.95625 0.98826 1.69946 1.37113 1.25330 1.21404 0.86381 0.79078 0.80446 0.80510 1.19975 1.21129 1.19945 1.20485 0.91355 1.02473 0.99252 0.83700 0.83283 0.90698 0.90736 0.91838 0.93043 0.97591 0.97467 0.92530 0.83118 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.40 -5.08 18.54 41.84 0.78 -4.30 16 2 C 0.26 2.69 15.33 -22.48 -0.34 2.34 16 3 C 0.04 0.37 5.73 -106.96 -0.61 -0.25 16 4 C -0.15 -1.25 9.73 -39.08 -0.38 -1.63 16 5 C 0.14 1.27 7.29 -39.50 -0.29 0.98 16 6 F -0.13 -1.21 17.26 2.25 0.04 -1.18 16 7 C -0.22 -2.09 9.01 -39.29 -0.35 -2.45 16 8 C 0.17 1.92 6.68 -39.29 -0.26 1.65 16 9 O -0.29 -3.97 10.10 -24.30 -0.25 -4.22 16 10 C 0.06 0.74 5.12 37.16 0.19 0.93 16 11 C 0.06 1.00 6.32 37.16 0.23 1.23 16 12 O -0.39 -8.92 10.29 -40.09 -0.41 -9.33 16 13 C 0.20 5.16 5.69 36.01 0.20 5.37 16 14 C -0.52 -14.94 9.43 -34.44 -0.32 -15.27 16 15 H 0.07 1.91 7.81 -52.48 -0.41 1.50 16 16 C 0.06 1.63 5.46 -17.82 -0.10 1.53 16 17 N -0.90 -26.40 13.29 55.43 0.74 -25.66 16 18 Si 0.91 21.53 29.54 -169.99 -5.02 16.51 16 19 H -0.27 -6.37 7.11 56.52 0.40 -5.96 16 20 H -0.29 -6.62 7.11 56.52 0.40 -6.22 16 21 H -0.27 -6.40 7.11 56.52 0.40 -6.00 16 22 C -0.11 -1.15 9.69 -39.00 -0.38 -1.53 16 23 H 0.15 0.90 8.06 -52.48 -0.42 0.47 16 24 H 0.15 1.18 6.28 -52.49 -0.33 0.85 16 25 H 0.07 0.87 7.65 -51.93 -0.40 0.48 16 26 H 0.07 0.64 7.66 -51.93 -0.40 0.25 16 27 H 0.06 0.92 8.14 -51.93 -0.42 0.50 16 28 H 0.05 0.82 8.14 -51.93 -0.42 0.40 16 29 H 0.01 0.17 8.14 -51.93 -0.42 -0.25 16 30 H 0.01 0.21 8.14 -51.93 -0.42 -0.22 16 31 H 0.27 7.31 8.31 -40.82 -0.34 6.97 16 32 H 0.15 1.45 8.06 -52.48 -0.42 1.03 16 LS Contribution 302.20 15.07 4.55 4.55 Total: -1.00 -31.72 302.20 -5.19 -36.91 By element: Atomic # 1 Polarization: -3.00 SS G_CDS: -3.21 Total: -6.21 kcal Atomic # 6 Polarization: -4.66 SS G_CDS: -2.41 Total: -7.07 kcal Atomic # 7 Polarization: -31.48 SS G_CDS: 1.51 Total: -29.97 kcal Atomic # 8 Polarization: -12.89 SS G_CDS: -0.66 Total: -13.55 kcal Atomic # 9 Polarization: -1.21 SS G_CDS: 0.04 Total: -1.18 kcal Atomic # 14 Polarization: 21.53 SS G_CDS: -5.02 Total: 16.51 kcal Total LS contribution 4.55 Total: 4.55 kcal Total: -31.72 -5.19 -36.91 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000292582343.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.609 kcal (2) G-P(sol) polarization free energy of solvation -31.722 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.331 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.192 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.913 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.523 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds