Wall clock time and date at job start Mon Mar 30 2020 06:39:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50692 * 1 3 3 C 1.38271 * 120.01440 * 2 1 4 4 Cl 1.73598 * 119.89894 * 0.03770 * 3 2 1 5 5 C 1.38431 * 120.20401 * 179.76851 * 3 2 1 6 6 C 1.38276 * 120.22692 * 0.50624 * 5 3 2 7 7 C 1.38649 * 120.02903 * 359.49328 * 6 5 3 8 8 N 1.39825 * 120.10486 * 180.27874 * 7 6 5 9 9 C 1.38882 * 120.01618 * 180.02562 * 2 1 3 10 10 N 1.39398 * 120.11199 * 359.96051 * 9 2 1 11 11 C 1.36810 * 119.99574 * 270.02090 * 10 9 2 12 12 H 1.08003 * 119.99212 * 174.55372 * 11 10 9 13 13 C 1.38752 * 120.00283 * 354.55124 * 11 10 9 14 14 N 1.31623 * 119.99954 * 6.58851 * 13 11 10 15 15 Si 1.86799 * 119.99853 * 186.58816 * 13 11 10 16 16 H 1.48498 * 109.47127 * 359.97438 * 15 13 11 17 17 H 1.48502 * 109.46976 * 120.00183 * 15 13 11 18 18 H 1.48506 * 109.46781 * 240.00153 * 15 13 11 19 19 C 1.46502 * 120.00110 * 90.02028 * 10 9 2 20 20 C 1.47196 * 109.47094 * 95.83680 * 19 10 9 21 21 N 5.38283 * 105.42641 * 201.43485 * 2 1 3 22 22 H 1.08995 * 109.47433 * 269.97918 * 1 2 3 23 23 H 1.09001 * 109.47225 * 29.98231 * 1 2 3 24 24 H 1.09008 * 109.47191 * 149.97692 * 1 2 3 25 25 H 1.07994 * 119.88353 * 180.27853 * 5 3 2 26 26 H 1.08004 * 119.98565 * 179.76959 * 6 5 3 27 27 H 0.97005 * 119.99974 * 359.97438 * 8 7 6 28 28 H 0.96999 * 120.00191 * 180.02562 * 8 7 6 29 29 H 0.96998 * 120.00441 * 179.97438 * 14 13 11 30 30 H 1.08998 * 109.46790 * 215.84143 * 19 10 9 31 31 H 1.09002 * 109.46997 * 335.83850 * 19 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1986 1.1973 0.0000 4 17 1.3283 2.6994 0.0010 5 6 3.5829 1.2019 0.0048 6 6 4.2830 0.0095 -0.0009 7 6 3.5991 -1.1967 -0.0008 8 7 4.3055 -2.4034 -0.0007 9 6 2.2017 -1.2026 -0.0005 10 7 1.5074 -2.4113 -0.0002 11 6 1.1671 -3.0043 1.1848 12 1 0.5540 -3.8935 1.1870 13 6 1.6095 -2.4635 2.3835 14 7 2.2457 -1.3112 2.3906 15 14 1.3024 -3.3708 3.9872 16 1 0.5721 -4.6336 3.7095 17 1 2.6013 -3.6820 4.6364 18 1 0.4893 -2.5176 4.8906 19 6 1.1422 -3.0466 -1.2688 20 6 2.1562 -4.0530 -1.6234 21 7 2.9388 -4.8300 -1.8962 22 1 -0.3634 -0.0004 1.0276 23 1 -0.3634 0.8901 -0.5136 24 1 -0.3634 -0.8898 -0.5142 25 1 4.1178 2.1400 0.0094 26 1 5.3630 0.0176 -0.0008 27 1 5.2755 -2.3976 -0.0010 28 1 3.8255 -3.2463 -0.0011 29 1 2.5547 -0.9329 3.2286 30 1 0.1706 -3.5300 -1.1666 31 1 1.0911 -2.2906 -2.0524 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000304479698.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:39:54 Heat of formation + Delta-G solvation = 73.265688 kcal Electronic energy + Delta-G solvation = -18325.736822 eV Core-core repulsion = 15440.857387 eV Total energy + Delta-G solvation = -2884.879436 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.068 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -38.97349 -36.39293 -35.56110 -34.76453 -33.42912 -31.64751 -30.68590 -27.81275 -26.66871 -25.82061 -23.41250 -20.67855 -20.28381 -17.73301 -17.14659 -16.21067 -15.55634 -15.18455 -14.68743 -13.99288 -13.85917 -13.72638 -13.05167 -12.84872 -12.40215 -12.27640 -11.90773 -11.58258 -11.49410 -11.22428 -11.15896 -11.02413 -10.89730 -10.84602 -10.62904 -10.23096 -10.09192 -9.77453 -9.18007 -9.03993 -7.52649 -7.47373 -6.51994 -5.58532 -3.49296 2.54466 2.63873 3.18519 3.25762 3.32538 3.36396 3.40523 3.44609 4.32141 4.74167 4.79542 5.03633 5.17568 5.34036 5.86122 5.89615 5.95579 6.08520 6.34643 6.42020 6.61082 6.78828 6.81921 7.14386 7.20888 7.33308 7.50556 7.66855 7.75161 8.02653 8.21639 8.51062 8.76066 9.06102 9.51528 9.88804 11.06352 Molecular weight = 265.07amu Principal moments of inertia in cm(-1) A = 0.016012 B = 0.009937 C = 0.008055 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1748.295479 B = 2817.184441 C = 3475.136429 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.092 4.092 2 C -0.033 4.033 3 C -0.082 4.082 4 Cl -0.118 7.118 5 C -0.089 4.089 6 C -0.205 4.205 7 C 0.238 3.762 8 N -0.871 5.871 9 C 0.224 3.776 10 N -0.541 5.541 11 C -0.288 4.288 12 H 0.086 0.914 13 C 0.019 3.981 14 N -0.870 5.870 15 Si 0.907 3.093 16 H -0.278 1.278 17 H -0.290 1.290 18 H -0.288 1.288 19 C 0.229 3.771 20 C 0.199 3.801 21 N -0.472 5.472 22 H 0.066 0.934 23 H 0.047 0.953 24 H 0.061 0.939 25 H 0.107 0.893 26 H 0.103 0.897 27 H 0.381 0.619 28 H 0.398 0.602 29 H 0.258 0.742 30 H 0.099 0.901 31 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.353 3.422 -5.242 6.405 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.037 4.037 3 C -0.110 4.110 4 Cl -0.090 7.090 5 C -0.108 4.108 6 C -0.229 4.229 7 C 0.131 3.869 8 N -0.409 5.409 9 C 0.126 3.874 10 N -0.257 5.257 11 C -0.414 4.414 12 H 0.103 0.897 13 C -0.182 4.182 14 N -0.511 5.511 15 Si 0.737 3.263 16 H -0.204 1.204 17 H -0.217 1.217 18 H -0.215 1.215 19 C 0.098 3.902 20 C -0.121 4.121 21 N -0.152 5.152 22 H 0.084 0.916 23 H 0.066 0.934 24 H 0.080 0.920 25 H 0.125 0.875 26 H 0.121 0.879 27 H 0.207 0.793 28 H 0.228 0.772 29 H 0.070 0.930 30 H 0.117 0.883 31 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -0.280 2.506 -5.429 5.986 hybrid contribution -0.007 -0.323 1.549 1.583 sum -0.286 2.183 -3.880 4.461 Atomic orbital electron populations 1.20487 0.91848 1.00513 1.02030 1.19476 0.95464 0.90455 0.98328 1.20065 0.91280 0.84423 1.15251 1.98245 1.77926 1.35050 1.97734 1.20205 0.91639 0.96955 1.02040 1.19921 0.97701 0.90948 1.14311 1.18144 0.91702 0.85602 0.91497 1.42353 1.07329 1.06199 1.84985 1.15865 0.86850 0.85062 0.99645 1.41217 1.64082 1.19561 1.00873 1.19295 1.30199 1.09719 0.82221 0.89665 1.24879 0.98708 0.96624 0.98010 1.69924 1.39672 1.16031 1.25433 0.86154 0.77430 0.79086 0.83670 1.20356 1.21686 1.21464 1.18698 0.91905 0.90260 0.89305 1.31698 0.95011 0.93952 0.91487 1.81014 1.11679 1.12154 1.10333 0.91551 0.93383 0.92014 0.87523 0.87863 0.79318 0.77241 0.92981 0.88323 0.88824 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 20. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -1.71 9.37 36.00 0.34 -1.38 16 2 C -0.03 -0.67 5.16 -104.38 -0.54 -1.21 16 3 C -0.08 -1.61 6.31 -39.50 -0.25 -1.86 16 4 Cl -0.12 -2.07 27.28 -51.86 -1.41 -3.48 16 5 C -0.09 -1.70 9.82 -39.50 -0.39 -2.08 16 6 C -0.20 -3.99 9.89 -39.42 -0.39 -4.38 16 7 C 0.24 4.95 5.72 -83.50 -0.48 4.47 16 8 N -0.87 -17.08 9.07 32.55 0.30 -16.79 16 9 C 0.22 4.72 2.82 -83.62 -0.24 4.48 16 10 N -0.54 -10.96 0.86 -116.10 -0.10 -11.06 16 11 C -0.29 -6.56 9.75 -15.14 -0.15 -6.71 16 12 H 0.09 1.91 7.84 -52.48 -0.41 1.50 16 13 C 0.02 0.46 5.44 -17.45 -0.09 0.37 16 14 N -0.87 -21.95 9.36 55.49 0.52 -21.43 16 15 Si 0.91 20.19 29.56 -169.99 -5.02 15.17 16 16 H -0.28 -6.10 7.11 56.52 0.40 -5.70 16 17 H -0.29 -6.73 7.11 56.52 0.40 -6.33 16 18 H -0.29 -6.57 7.11 56.52 0.40 -6.17 16 19 C 0.23 3.68 5.63 -6.83 -0.04 3.64 16 20 C 0.20 3.52 13.99 -20.76 -0.29 3.23 16 21 N -0.47 -9.11 18.43 42.16 0.78 -8.33 16 22 H 0.07 1.36 8.14 -51.93 -0.42 0.94 16 23 H 0.05 0.81 6.89 -51.93 -0.36 0.45 16 24 H 0.06 1.07 7.00 -51.92 -0.36 0.71 16 25 H 0.11 1.81 8.06 -52.49 -0.42 1.39 16 26 H 0.10 1.80 8.06 -52.48 -0.42 1.37 16 27 H 0.38 6.57 8.84 -40.82 -0.36 6.21 16 28 H 0.40 8.31 6.18 -40.82 -0.25 8.06 16 29 H 0.26 6.69 8.31 -40.82 -0.34 6.35 16 30 H 0.10 1.36 8.09 -51.93 -0.42 0.94 16 31 H 0.09 1.30 8.00 -51.93 -0.42 0.88 16 LS Contribution 285.19 15.07 4.30 4.30 Total: -1.00 -26.32 285.19 -6.15 -32.47 By element: Atomic # 1 Polarization: 13.58 SS G_CDS: -2.98 Total: 10.60 kcal Atomic # 6 Polarization: 1.07 SS G_CDS: -2.51 Total: -1.44 kcal Atomic # 7 Polarization: -59.10 SS G_CDS: 1.49 Total: -57.61 kcal Atomic # 14 Polarization: 20.19 SS G_CDS: -5.02 Total: 15.17 kcal Atomic # 17 Polarization: -2.07 SS G_CDS: -1.41 Total: -3.48 kcal Total LS contribution 4.30 Total: 4.30 kcal Total: -26.32 -6.15 -32.47 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000304479698.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 105.735 kcal (2) G-P(sol) polarization free energy of solvation -26.323 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 79.413 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.147 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.470 kcal (6) G-S(sol) free energy of system = (1) + (5) 73.266 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds