Wall clock time and date at job start Mon Mar 30 2020 06:28:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.43197 * 179.97438 * 2 1 4 4 C 1.39643 * 120.12255 * 19.55037 * 3 2 1 5 5 C 1.38082 * 119.94707 * 180.02562 * 4 3 2 6 6 Cl 1.73603 * 119.90574 * 180.02562 * 5 4 3 7 7 C 1.38394 * 120.18646 * 359.72725 * 5 4 3 8 8 C 1.38803 * 120.23609 * 0.54756 * 7 5 4 9 9 O 1.35905 * 119.97463 * 179.72572 * 8 7 5 10 10 C 1.42905 * 116.99842 * 359.72627 * 9 8 7 11 11 C 1.52999 * 109.46728 * 179.97438 * 10 9 8 12 12 C 1.53006 * 109.46997 * 180.02562 * 11 10 9 13 13 C 1.50699 * 109.47240 * 180.02562 * 12 11 10 14 14 H 1.08003 * 119.99962 * 0.02562 * 13 12 11 15 15 C 1.37873 * 119.99861 * 179.97438 * 13 12 11 16 16 N 1.31522 * 120.00243 * 0.02562 * 15 13 12 17 17 Si 1.86803 * 119.99980 * 179.97438 * 15 13 12 18 18 H 1.48500 * 109.46921 * 60.00420 * 17 15 13 19 19 H 1.48506 * 109.46938 * 180.02562 * 17 15 13 20 20 H 1.48490 * 109.47056 * 300.00305 * 17 15 13 21 21 C 1.38494 * 120.05107 * 359.45476 * 8 7 5 22 22 H 1.08001 * 120.02530 * 0.02562 * 4 3 2 23 23 H 1.07992 * 119.88361 * 180.29994 * 7 5 4 24 24 H 1.09000 * 109.47187 * 300.00217 * 10 9 8 25 25 H 1.09001 * 109.46558 * 60.00265 * 10 9 8 26 26 H 1.09000 * 109.47486 * 300.00062 * 11 10 9 27 27 H 1.09001 * 109.47362 * 60.00784 * 11 10 9 28 28 H 1.09000 * 109.46866 * 300.00212 * 12 11 10 29 29 H 1.08996 * 109.47261 * 59.99820 * 12 11 10 30 30 H 0.96992 * 120.00032 * 179.97438 * 16 15 13 31 31 H 1.07991 * 120.08990 * 180.25188 * 21 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2693 -1.1373 -0.4042 5 6 4.6501 -1.1328 -0.4023 6 17 5.5209 -2.5478 -0.9056 7 6 5.3418 -0.0015 -0.0061 8 6 4.6525 1.1319 0.4025 9 8 5.3372 2.2380 0.7958 10 6 6.7639 2.1615 0.7690 11 6 7.3548 3.4915 1.2411 12 6 8.8824 3.4099 1.2118 13 6 9.4645 4.7196 1.6774 14 1 8.8103 5.5292 1.9658 15 6 10.8321 4.8841 1.7362 16 7 11.6287 3.8981 1.3855 17 14 11.5537 6.5078 2.3126 18 1 11.0988 6.7875 3.6983 19 1 13.0363 6.4285 2.2843 20 1 11.0995 7.5984 1.4130 21 6 3.2676 1.1383 0.4045 22 1 2.7321 -2.0201 -0.7180 23 1 6.4217 -0.0018 -0.0111 24 1 7.0973 1.3607 1.4290 25 1 7.0976 1.9567 -0.2482 26 1 7.0214 4.2921 0.5808 27 1 7.0211 3.6968 2.2583 28 1 9.2161 2.6093 1.8719 29 1 9.2159 3.2048 0.1946 30 1 12.5908 4.0139 1.4265 31 1 2.7307 2.0211 0.7184 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000309224492.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:28:23 Heat of formation + Delta-G solvation = -8.818289 kcal Electronic energy + Delta-G solvation = -16082.949206 eV Core-core repulsion = 13162.217591 eV Total energy + Delta-G solvation = -2920.731615 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -40.48351 -38.24650 -37.06245 -36.21686 -34.14132 -31.94567 -31.53171 -30.25606 -27.13562 -24.71358 -23.15496 -22.73871 -20.39855 -19.58316 -17.01694 -16.71298 -16.35228 -16.09999 -16.08676 -15.11980 -14.51109 -14.46703 -13.87227 -13.54377 -13.54126 -13.10730 -13.00014 -12.49436 -12.26574 -12.05609 -11.68882 -11.61381 -11.30697 -11.03689 -10.71334 -10.67723 -10.65002 -9.87542 -9.61676 -9.25763 -9.25066 -8.55106 -8.44070 -6.09512 -4.12624 0.29247 0.85628 1.69319 2.30379 2.55181 3.07256 3.29081 3.33722 3.36296 3.42958 3.60985 4.39479 4.57807 4.62058 4.67925 4.81501 5.16437 5.26708 5.35905 5.36393 5.68732 5.72922 5.79373 5.83722 6.03122 6.42521 6.53099 6.87467 7.10442 7.28334 7.51832 7.62252 7.88307 8.29268 8.93312 9.52267 11.01848 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.026824 B = 0.003384 C = 0.003013 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1043.576642 B = 8272.523847 C = 9290.351329 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.409 5.409 2 C 0.261 3.739 3 C 0.021 3.979 4 C -0.111 4.111 5 C 0.005 3.995 6 Cl -0.055 7.055 7 C -0.175 4.175 8 C 0.157 3.843 9 O -0.305 6.305 10 C 0.054 3.946 11 C -0.109 4.109 12 C 0.025 3.975 13 C -0.524 4.524 14 H 0.057 0.943 15 C 0.058 3.942 16 N -0.895 5.895 17 Si 0.895 3.105 18 H -0.276 1.276 19 H -0.287 1.287 20 H -0.276 1.276 21 C -0.106 4.106 22 H 0.143 0.857 23 H 0.151 0.849 24 H 0.064 0.936 25 H 0.064 0.936 26 H 0.061 0.939 27 H 0.061 0.939 28 H 0.019 0.981 29 H 0.019 0.981 30 H 0.263 0.737 31 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.635 -11.042 -3.927 17.980 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.083 5.083 2 C -0.055 4.055 3 C 0.018 3.982 4 C -0.132 4.132 5 C -0.022 4.022 6 Cl -0.026 7.026 7 C -0.195 4.195 8 C 0.110 3.890 9 O -0.218 6.218 10 C -0.020 4.020 11 C -0.146 4.146 12 C -0.012 4.012 13 C -0.562 4.562 14 H 0.075 0.925 15 C -0.144 4.144 16 N -0.534 5.534 17 Si 0.722 3.278 18 H -0.201 1.201 19 H -0.212 1.212 20 H -0.202 1.202 21 C -0.127 4.127 22 H 0.161 0.839 23 H 0.169 0.831 24 H 0.082 0.918 25 H 0.082 0.918 26 H 0.080 0.920 27 H 0.080 0.920 28 H 0.038 0.962 29 H 0.038 0.962 30 H 0.072 0.928 31 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -15.180 -11.019 -3.919 19.163 hybrid contribution 1.284 0.534 0.190 1.403 sum -13.896 -10.486 -3.729 17.803 Atomic orbital electron populations 1.81274 1.11805 1.07148 1.08113 1.25386 0.92257 0.93930 0.93946 1.15364 0.84375 0.94705 1.03790 1.20821 0.91961 0.98272 1.02168 1.20377 0.91682 0.89200 1.00943 1.98403 1.76240 1.38583 1.89359 1.21512 1.02069 0.92103 1.03855 1.18651 0.91151 0.86420 0.92804 1.86205 1.22438 1.32988 1.80121 1.23394 0.74949 1.02217 1.01478 1.21750 0.99169 0.92699 1.01019 1.19045 0.86746 0.97783 0.97632 1.21129 0.91540 0.98909 1.44620 0.92469 1.25014 0.97254 0.96776 0.95306 1.69942 1.03761 1.31656 1.48032 0.86610 0.77889 0.83881 0.79373 1.20147 1.21240 1.20152 1.20475 0.91395 0.98519 1.02317 0.83933 0.83135 0.91757 0.91767 0.91989 0.91987 0.96244 0.96238 0.92789 0.83456 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -4.99 18.54 41.84 0.78 -4.21 16 2 C 0.26 2.64 15.33 -22.47 -0.34 2.30 16 3 C 0.02 0.19 5.73 -106.96 -0.61 -0.42 16 4 C -0.11 -0.94 9.53 -39.11 -0.37 -1.31 16 5 C 0.00 0.05 6.31 -39.58 -0.25 -0.20 16 6 Cl -0.05 -0.51 28.95 -51.86 -1.50 -2.01 16 7 C -0.18 -1.86 8.81 -39.32 -0.35 -2.21 16 8 C 0.16 1.81 6.68 -39.28 -0.26 1.55 16 9 O -0.30 -4.25 10.13 -19.44 -0.20 -4.44 16 10 C 0.05 0.80 4.74 37.16 0.18 0.98 16 11 C -0.11 -2.04 5.52 -26.73 -0.15 -2.19 16 12 C 0.03 0.60 4.97 -27.88 -0.14 0.46 16 13 C -0.52 -14.16 9.11 -34.44 -0.31 -14.48 16 14 H 0.06 1.50 7.74 -52.48 -0.41 1.09 16 15 C 0.06 1.61 5.46 -17.82 -0.10 1.51 16 16 N -0.90 -25.88 13.29 55.43 0.74 -25.15 16 17 Si 0.89 20.97 29.54 -169.99 -5.02 15.95 16 18 H -0.28 -6.36 7.11 56.52 0.40 -5.96 16 19 H -0.29 -6.66 7.11 56.52 0.40 -6.26 16 20 H -0.28 -6.36 7.11 56.52 0.40 -5.96 16 21 C -0.11 -1.04 9.69 -39.00 -0.38 -1.42 16 22 H 0.14 0.95 8.06 -52.49 -0.42 0.53 16 23 H 0.15 1.58 6.28 -52.49 -0.33 1.25 16 24 H 0.06 0.90 7.67 -51.93 -0.40 0.50 16 25 H 0.06 0.90 7.64 -51.93 -0.40 0.50 16 26 H 0.06 1.16 8.14 -51.93 -0.42 0.74 16 27 H 0.06 1.16 8.14 -51.93 -0.42 0.74 16 28 H 0.02 0.48 8.14 -51.93 -0.42 0.06 16 29 H 0.02 0.48 8.14 -51.93 -0.42 0.06 16 30 H 0.26 7.19 8.31 -40.82 -0.34 6.85 16 31 H 0.15 1.28 8.06 -52.49 -0.42 0.86 16 LS Contribution 299.97 15.07 4.52 4.52 Total: -1.00 -28.80 299.97 -6.98 -35.77 By element: Atomic # 1 Polarization: -1.79 SS G_CDS: -3.20 Total: -4.99 kcal Atomic # 6 Polarization: -12.35 SS G_CDS: -3.09 Total: -15.44 kcal Atomic # 7 Polarization: -30.87 SS G_CDS: 1.51 Total: -29.36 kcal Atomic # 8 Polarization: -4.25 SS G_CDS: -0.20 Total: -4.44 kcal Atomic # 14 Polarization: 20.97 SS G_CDS: -5.02 Total: 15.95 kcal Atomic # 17 Polarization: -0.51 SS G_CDS: -1.50 Total: -2.01 kcal Total LS contribution 4.52 Total: 4.52 kcal Total: -28.80 -6.98 -35.77 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000309224492.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.956 kcal (2) G-P(sol) polarization free energy of solvation -28.798 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.841 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.977 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.775 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.818 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds