Wall clock time and date at job start Mon Mar 30 2020 06:36:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 H 1.09001 * 109.47272 * 2 1 4 4 N 1.46499 * 109.47091 * 120.00236 * 2 1 3 5 5 C 1.36928 * 120.00267 * 275.00309 * 4 2 1 6 6 H 1.08004 * 120.00130 * 359.97438 * 5 4 2 7 7 C 1.38811 * 120.00303 * 180.02562 * 5 4 2 8 8 N 1.31622 * 119.99744 * 359.97438 * 7 5 4 9 9 Si 1.86800 * 120.00255 * 179.97438 * 7 5 4 10 10 H 1.48496 * 109.47163 * 89.99725 * 9 7 5 11 11 H 1.48500 * 109.47004 * 209.99668 * 9 7 5 12 12 H 1.48501 * 109.47019 * 329.99406 * 9 7 5 13 13 C 1.50700 * 109.47022 * 240.00203 * 2 1 3 14 14 C 1.33998 * 124.92200 * 100.00380 * 13 2 1 15 15 C 1.46790 * 106.18519 * 179.97438 * 14 13 2 16 16 C 1.39424 * 134.32840 * 179.97438 * 15 14 13 17 17 C 1.37826 * 119.59220 * 179.65702 * 16 15 14 18 18 Cl 1.73591 * 119.87835 * 180.30463 * 17 16 15 19 19 C 1.38865 * 120.24313 * 0.62275 * 17 16 15 20 20 C 1.37809 * 120.67863 * 359.40548 * 19 17 16 21 21 C 1.38926 * 119.97622 * 0.27584 * 20 19 17 22 22 O 1.34439 * 124.92550 * 279.97763 * 13 2 1 23 23 H 1.09009 * 109.46894 * 59.99560 * 1 2 3 24 24 H 1.08998 * 109.47657 * 179.97438 * 1 2 3 25 25 H 1.08999 * 109.47064 * 300.00133 * 1 2 3 26 26 H 0.97004 * 119.99367 * 94.99494 * 4 2 1 27 27 H 0.97005 * 119.99702 * 180.02562 * 8 7 5 28 28 H 1.08000 * 126.90576 * 0.02562 * 14 13 2 29 29 H 1.07999 * 120.20492 * 0.02562 * 16 15 14 30 30 H 1.08002 * 119.66259 * 179.68822 * 19 17 16 31 31 H 1.08003 * 120.01163 * 180.30141 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 7 2.0183 -0.6907 1.1961 5 6 2.1490 -0.0077 2.3757 6 1 1.8925 1.0403 2.4242 7 6 2.6122 -0.6620 3.5089 8 7 2.9253 -1.9390 3.4497 9 14 2.7913 0.2699 5.1180 10 1 1.5239 0.1788 5.8864 11 1 3.8962 -0.3233 5.9132 12 1 3.0961 1.6952 4.8332 13 6 2.0323 -0.7104 -1.2305 14 6 2.4679 -0.1031 -2.3427 15 6 2.8546 -1.1742 -3.2690 16 6 3.3722 -1.2032 -4.5633 17 6 3.6383 -2.4153 -5.1629 18 17 4.2903 -2.4599 -6.7711 19 6 3.3806 -3.6011 -4.4878 20 6 2.8684 -3.5849 -3.2085 21 6 2.5994 -2.3735 -2.5838 22 8 2.1088 -2.0452 -1.3713 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3634 -1.0276 -0.0005 25 1 -0.3633 0.5138 0.8900 26 1 2.2489 -1.6319 1.1524 27 1 3.2487 -2.3963 4.2418 28 1 2.5241 0.9605 -2.5213 29 1 3.5691 -0.2814 -5.0905 30 1 3.5880 -4.5458 -4.9685 31 1 2.6766 -4.5136 -2.6916 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000381317547.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:36:03 Heat of formation + Delta-G solvation = 28.350871 kcal Electronic energy + Delta-G solvation = -16941.427711 eV Core-core repulsion = 14022.307872 eV Total energy + Delta-G solvation = -2919.119840 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -42.28323 -38.15804 -36.35965 -35.56486 -32.87215 -31.91632 -30.15135 -29.22910 -28.00175 -24.45291 -23.09457 -22.55961 -21.30445 -20.29928 -17.52695 -17.22459 -16.86328 -15.97218 -15.67636 -14.72810 -14.17717 -14.12415 -13.74545 -13.31209 -13.21808 -12.86590 -12.62785 -12.46791 -12.31719 -11.57132 -11.40231 -11.20042 -10.95483 -10.93602 -10.82365 -10.71391 -10.16103 -10.04654 -9.79471 -9.06840 -8.42026 -8.02106 -7.13377 -5.86190 -3.17980 0.89717 1.18879 2.01845 2.56819 2.92452 3.38877 3.43620 3.45692 3.58515 4.42669 4.54339 4.67863 4.97832 5.16467 5.24302 5.29964 5.44979 5.61101 5.67959 5.83183 5.86765 6.00679 6.09566 6.12024 6.23824 6.34760 6.47046 6.50931 6.64110 6.85445 7.39417 7.59802 8.29580 9.42129 9.92723 10.29345 11.35557 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.039200 B = 0.003938 C = 0.003813 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 714.105978 B = 7108.133362 C = 7342.131974 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C 0.241 3.759 3 H 0.082 0.918 4 N -0.719 5.719 5 C -0.251 4.251 6 H 0.075 0.925 7 C -0.007 4.007 8 N -0.926 5.926 9 Si 0.911 3.089 10 H -0.288 1.288 11 H -0.290 1.290 12 H -0.280 1.280 13 C 0.080 3.920 14 C -0.232 4.232 15 C -0.110 4.110 16 C -0.068 4.068 17 C -0.054 4.054 18 Cl -0.075 7.075 19 C -0.098 4.098 20 C -0.088 4.088 21 C 0.052 3.948 22 O -0.176 6.176 23 H 0.043 0.957 24 H 0.053 0.947 25 H 0.068 0.932 26 H 0.391 0.609 27 H 0.258 0.742 28 H 0.159 0.841 29 H 0.135 0.865 30 H 0.141 0.859 31 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.582 -0.249 -17.200 17.212 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.226 4.226 2 C 0.131 3.869 3 H 0.099 0.901 4 N -0.361 5.361 5 C -0.381 4.381 6 H 0.093 0.907 7 C -0.204 4.204 8 N -0.573 5.573 9 Si 0.741 3.259 10 H -0.215 1.215 11 H -0.217 1.217 12 H -0.206 1.206 13 C 0.031 3.969 14 C -0.252 4.252 15 C -0.111 4.111 16 C -0.086 4.086 17 C -0.080 4.080 18 Cl -0.046 7.046 19 C -0.117 4.117 20 C -0.107 4.107 21 C 0.004 3.996 22 O -0.076 6.076 23 H 0.063 0.937 24 H 0.072 0.928 25 H 0.087 0.913 26 H 0.225 0.775 27 H 0.067 0.933 28 H 0.176 0.824 29 H 0.153 0.847 30 H 0.159 0.841 31 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -0.569 -0.343 -16.969 16.982 hybrid contribution 0.327 0.208 0.646 0.753 sum -0.242 -0.134 -16.323 16.326 Atomic orbital electron populations 1.22500 0.97205 1.01926 1.00971 1.19164 0.92857 0.94066 0.80843 0.90083 1.42435 1.77960 1.11062 1.04655 1.19222 1.37862 0.94148 0.86873 0.90711 1.24798 1.01365 0.95990 0.98258 1.69686 1.49803 1.08725 1.29108 0.86149 0.77397 0.78824 0.83532 1.21523 1.21662 1.20570 1.23521 0.96344 0.79429 0.97617 1.22100 1.10550 0.99230 0.93305 1.19816 1.02961 0.93424 0.94904 1.20261 0.98472 0.96896 0.93018 1.20545 1.05050 0.94729 0.87691 1.98350 1.84940 1.98893 1.22455 1.20659 1.00178 0.97283 0.93571 1.19849 1.01667 0.95086 0.94063 1.19751 0.99659 0.95369 0.84847 1.84100 1.67784 1.24552 1.31165 0.93750 0.92830 0.91345 0.77463 0.93260 0.82384 0.84721 0.84101 0.84134 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.88 9.47 37.16 0.35 -2.53 16 2 C 0.24 4.71 3.33 -69.08 -0.23 4.48 16 3 H 0.08 1.50 8.06 -51.93 -0.42 1.08 16 4 N -0.72 -17.87 5.11 -54.55 -0.28 -18.15 16 5 C -0.25 -6.74 9.93 -15.06 -0.15 -6.89 16 6 H 0.07 1.91 7.83 -52.48 -0.41 1.50 16 7 C -0.01 -0.20 5.50 -17.43 -0.10 -0.30 16 8 N -0.93 -27.67 13.06 55.49 0.72 -26.94 16 9 Si 0.91 21.81 29.55 -169.99 -5.02 16.79 16 10 H -0.29 -6.86 7.11 56.52 0.40 -6.46 16 11 H -0.29 -7.05 7.11 56.52 0.40 -6.65 16 12 H -0.28 -6.49 7.11 56.52 0.40 -6.09 16 13 C 0.08 1.47 6.05 -35.80 -0.22 1.26 16 14 C -0.23 -3.68 10.99 -37.62 -0.41 -4.10 16 15 C -0.11 -1.71 6.40 -105.16 -0.67 -2.38 16 16 C -0.07 -0.89 9.87 -39.29 -0.39 -1.28 16 17 C -0.05 -0.66 6.32 -39.50 -0.25 -0.91 16 18 Cl -0.08 -0.80 28.95 -51.86 -1.50 -2.30 16 19 C -0.10 -1.15 9.79 -39.51 -0.39 -1.54 16 20 C -0.09 -1.19 10.06 -39.48 -0.40 -1.58 16 21 C 0.05 0.86 7.41 -38.49 -0.29 0.58 16 22 O -0.18 -3.39 10.19 3.79 0.04 -3.35 16 23 H 0.04 0.64 8.14 -51.92 -0.42 0.22 16 24 H 0.05 0.97 8.14 -51.93 -0.42 0.55 16 25 H 0.07 1.22 8.14 -51.93 -0.42 0.80 16 26 H 0.39 10.57 7.47 -40.82 -0.30 10.27 16 27 H 0.26 7.42 8.31 -40.82 -0.34 7.08 16 28 H 0.16 2.06 8.06 -52.49 -0.42 1.64 16 29 H 0.13 1.50 8.06 -52.49 -0.42 1.08 16 30 H 0.14 1.27 8.06 -52.49 -0.42 0.84 16 31 H 0.14 1.61 8.06 -52.48 -0.42 1.19 16 LS Contribution 291.62 15.07 4.39 4.39 Total: -1.00 -29.71 291.62 -8.01 -37.72 By element: Atomic # 1 Polarization: 10.26 SS G_CDS: -3.23 Total: 7.04 kcal Atomic # 6 Polarization: -12.06 SS G_CDS: -3.13 Total: -15.19 kcal Atomic # 7 Polarization: -45.54 SS G_CDS: 0.45 Total: -45.09 kcal Atomic # 8 Polarization: -3.39 SS G_CDS: 0.04 Total: -3.35 kcal Atomic # 14 Polarization: 21.81 SS G_CDS: -5.02 Total: 16.79 kcal Atomic # 17 Polarization: -0.80 SS G_CDS: -1.50 Total: -2.30 kcal Total LS contribution 4.39 Total: 4.39 kcal Total: -29.71 -8.01 -37.72 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000381317547.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 66.069 kcal (2) G-P(sol) polarization free energy of solvation -29.711 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 36.358 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.007 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.718 kcal (6) G-S(sol) free energy of system = (1) + (5) 28.351 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds