Wall clock time and date at job start Mon Mar 30 2020 06:35:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.33089 * 1 3 3 Cl 1.73607 * 120.00081 * 2 1 4 4 C 1.47157 * 120.00200 * 180.02562 * 2 1 3 5 5 O 1.21623 * 120.00154 * 213.71324 * 4 2 1 6 6 N 1.34775 * 119.99921 * 33.70860 * 4 2 1 7 7 C 1.46501 * 119.99916 * 2.89087 * 6 4 2 8 8 C 1.50703 * 109.47150 * 253.16041 * 7 6 4 9 9 H 1.07999 * 119.99910 * 0.02562 * 8 7 6 10 10 C 1.37872 * 120.00065 * 180.02562 * 8 7 6 11 11 N 1.31519 * 119.99902 * 359.97438 * 10 8 7 12 12 Si 1.86800 * 120.00071 * 180.02562 * 10 8 7 13 13 H 1.48502 * 109.47194 * 90.00110 * 12 10 8 14 14 H 1.48513 * 109.46952 * 209.99785 * 12 10 8 15 15 H 1.48501 * 109.47014 * 329.99761 * 12 10 8 16 16 C 1.39830 * 120.00321 * 182.89216 * 6 4 2 17 17 C 1.38902 * 120.07221 * 340.81635 * 16 6 4 18 18 C 1.38100 * 119.92672 * 179.97438 * 17 16 6 19 19 C 1.38285 * 120.07464 * 0.02562 * 18 17 16 20 20 C 1.38284 * 120.14543 * 359.97438 * 19 18 17 21 21 C 1.38103 * 120.07217 * 359.97438 * 20 19 18 22 22 H 1.07996 * 120.00141 * 167.89043 * 1 2 3 23 23 H 1.08001 * 119.99650 * 347.89061 * 1 2 3 24 24 H 1.08999 * 109.47038 * 13.16017 * 7 6 4 25 25 H 1.09000 * 109.46926 * 133.16439 * 7 6 4 26 26 H 0.97004 * 120.00088 * 180.02562 * 11 10 8 27 27 H 1.08004 * 120.03265 * 359.70038 * 17 16 6 28 28 H 1.08004 * 119.96033 * 179.97438 * 18 17 16 29 29 H 1.07997 * 119.92382 * 179.97438 * 19 18 17 30 30 H 1.07999 * 119.96428 * 180.02562 * 20 19 18 31 31 H 1.08005 * 120.03557 * 179.97438 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3309 0.0000 0.0000 3 17 2.1989 1.5035 0.0000 4 6 2.0667 -1.2744 -0.0006 5 8 3.1295 -1.3632 0.5840 6 7 1.5628 -2.3432 -0.6488 7 6 0.3146 -2.2193 -1.4056 8 6 -0.7958 -2.9140 -0.6603 9 1 -0.5922 -3.3989 0.2829 10 6 -2.0717 -2.9306 -1.1827 11 7 -2.3198 -2.3397 -2.3311 12 14 -3.4482 -3.7911 -0.2585 13 1 -4.1048 -2.8277 0.6612 14 1 -4.4469 -4.3092 -1.2279 15 1 -2.8873 -4.9206 0.5257 16 6 2.2313 -3.5703 -0.5990 17 6 3.5731 -3.6180 -0.2429 18 6 4.2303 -4.8316 -0.1942 19 6 3.5542 -5.9985 -0.4999 20 6 2.2184 -5.9546 -0.8548 21 6 1.5550 -4.7443 -0.9045 22 1 -0.5400 -0.9144 -0.1962 23 1 -0.5399 0.9145 0.1962 24 1 0.0664 -1.1649 -1.5271 25 1 0.4371 -2.6791 -2.3863 26 1 -3.2175 -2.3510 -2.6985 27 1 4.1029 -2.7064 -0.0087 28 1 5.2737 -4.8693 0.0822 29 1 4.0706 -6.9462 -0.4614 30 1 1.6931 -6.8678 -1.0926 31 1 0.5118 -4.7107 -1.1821 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000401200175.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:35:16 Heat of formation + Delta-G solvation = 34.384707 kcal Electronic energy + Delta-G solvation = -17771.135661 eV Core-core repulsion = 14852.277468 eV Total energy + Delta-G solvation = -2918.858193 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -40.30857 -37.85099 -36.20707 -35.65717 -32.98205 -32.43437 -30.31425 -28.97013 -27.71921 -23.77604 -23.11970 -22.18236 -20.86452 -19.07479 -17.16249 -16.52922 -16.16715 -15.80270 -15.07592 -14.60001 -14.43475 -13.75706 -13.62753 -13.31392 -12.78231 -12.67620 -12.48847 -12.19444 -11.76340 -11.55357 -11.13870 -11.11404 -10.85132 -10.69779 -10.40658 -10.28023 -10.00843 -9.31125 -8.98725 -8.94943 -8.61717 -8.31768 -7.28430 -6.46814 -4.58464 1.57173 2.01624 2.02904 2.40194 3.08345 3.17505 3.20659 3.49475 3.74709 4.11245 4.47207 4.83586 4.92114 5.46341 5.54548 5.70471 6.02800 6.06344 6.12768 6.20027 6.34103 6.49128 6.67235 6.70089 6.90541 7.00904 7.02275 7.11407 7.26104 7.46051 7.64294 7.74059 8.00919 8.47342 8.63056 9.10087 10.57361 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.012068 B = 0.010468 C = 0.005957 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2319.695375 B = 2674.077100 C = 4699.318640 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.136 4.136 3 Cl -0.072 7.072 4 C 0.556 3.444 5 O -0.532 6.532 6 N -0.529 5.529 7 C 0.205 3.795 8 C -0.554 4.554 9 H 0.071 0.929 10 C 0.073 3.927 11 N -0.876 5.876 12 Si 0.899 3.101 13 H -0.275 1.275 14 H -0.282 1.282 15 H -0.269 1.269 16 C 0.165 3.835 17 C -0.157 4.157 18 C -0.114 4.114 19 C -0.155 4.155 20 C -0.111 4.111 21 C -0.136 4.136 22 H 0.196 0.804 23 H 0.113 0.887 24 H 0.068 0.932 25 H 0.043 0.957 26 H 0.272 0.728 27 H 0.159 0.841 28 H 0.115 0.885 29 H 0.111 0.889 30 H 0.117 0.883 31 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.364 -0.284 1.658 4.676 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C -0.165 4.165 3 Cl -0.044 7.044 4 C 0.347 3.653 5 O -0.412 6.412 6 N -0.249 5.249 7 C 0.086 3.914 8 C -0.592 4.592 9 H 0.090 0.910 10 C -0.134 4.134 11 N -0.512 5.512 12 Si 0.726 3.274 13 H -0.201 1.201 14 H -0.208 1.208 15 H -0.194 1.194 16 C 0.070 3.930 17 C -0.177 4.177 18 C -0.133 4.133 19 C -0.174 4.174 20 C -0.130 4.130 21 C -0.156 4.156 22 H 0.212 0.788 23 H 0.131 0.869 24 H 0.085 0.915 25 H 0.061 0.939 26 H 0.081 0.919 27 H 0.176 0.824 28 H 0.133 0.867 29 H 0.129 0.871 30 H 0.135 0.865 31 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 4.791 -0.076 1.790 5.115 hybrid contribution -0.907 -0.244 0.373 1.011 sum 3.885 -0.320 2.164 4.458 Atomic orbital electron populations 1.26644 0.93887 1.08028 0.87007 1.22637 0.93516 0.86772 1.13555 1.98330 1.78579 1.30263 1.97231 1.18137 0.84683 0.83590 0.78935 1.90582 1.21844 1.84086 1.44680 1.45752 1.25390 1.06976 1.46760 1.20343 0.78614 1.00379 0.92044 1.21384 0.92851 1.37002 1.07928 0.91049 1.24992 0.98780 0.94814 0.94788 1.69925 1.22360 1.41392 1.17495 0.86448 0.81180 0.80173 0.79635 1.20093 1.20781 1.19353 1.17910 0.91049 0.85233 0.98782 1.22050 0.93417 1.00143 1.02083 1.20946 0.99286 0.92398 1.00621 1.21004 0.95181 0.97786 1.03389 1.20925 0.94450 0.97271 1.00355 1.21570 1.01974 0.90381 1.01706 0.78774 0.86870 0.91502 0.93902 0.91858 0.82441 0.86741 0.87112 0.86459 0.82763 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -2.11 12.30 28.94 0.36 -1.76 16 2 C -0.14 -2.56 5.93 -37.75 -0.22 -2.79 16 3 Cl -0.07 -1.22 28.84 -51.86 -1.50 -2.72 16 4 C 0.56 11.78 7.34 -12.64 -0.09 11.69 16 5 O -0.53 -11.90 13.62 5.26 0.07 -11.82 16 6 N -0.53 -11.31 2.75 -116.03 -0.32 -11.63 16 7 C 0.20 4.52 4.08 -5.19 -0.02 4.50 16 8 C -0.55 -12.76 5.16 -34.44 -0.18 -12.94 16 9 H 0.07 1.70 7.69 -52.49 -0.40 1.30 16 10 C 0.07 1.70 5.46 -17.82 -0.10 1.60 16 11 N -0.88 -21.49 13.29 55.43 0.74 -20.75 16 12 Si 0.90 18.60 29.54 -169.99 -5.02 13.58 16 13 H -0.28 -5.67 7.11 56.52 0.40 -5.26 16 14 H -0.28 -5.88 7.11 56.52 0.40 -5.48 16 15 H -0.27 -5.62 7.11 56.52 0.40 -5.22 16 16 C 0.17 3.44 6.31 -83.72 -0.53 2.91 16 17 C -0.16 -3.07 8.87 -39.39 -0.35 -3.42 16 18 C -0.11 -1.90 10.04 -39.61 -0.40 -2.30 16 19 C -0.15 -2.43 10.04 -39.55 -0.40 -2.82 16 20 C -0.11 -1.87 10.04 -39.61 -0.40 -2.27 16 21 C -0.14 -2.69 8.90 -39.39 -0.35 -3.04 16 22 H 0.20 3.95 3.29 -52.49 -0.17 3.78 16 23 H 0.11 1.70 8.06 -52.49 -0.42 1.28 16 24 H 0.07 1.47 4.41 -51.93 -0.23 1.24 16 25 H 0.04 1.02 8.07 -51.93 -0.42 0.60 16 26 H 0.27 6.37 8.31 -40.82 -0.34 6.03 16 27 H 0.16 3.24 5.12 -53.00 -0.27 2.97 16 28 H 0.11 1.60 8.06 -52.48 -0.42 1.17 16 29 H 0.11 1.41 8.06 -52.49 -0.42 0.98 16 30 H 0.12 1.68 8.06 -52.49 -0.42 1.25 16 31 H 0.15 3.25 5.62 -52.48 -0.29 2.95 16 LS Contribution 278.57 15.07 4.20 4.20 Total: -1.00 -25.06 278.57 -7.12 -32.18 By element: Atomic # 1 Polarization: 10.22 SS G_CDS: -2.62 Total: 7.60 kcal Atomic # 6 Polarization: -7.96 SS G_CDS: -2.68 Total: -10.64 kcal Atomic # 7 Polarization: -32.80 SS G_CDS: 0.42 Total: -32.38 kcal Atomic # 8 Polarization: -11.90 SS G_CDS: 0.07 Total: -11.82 kcal Atomic # 14 Polarization: 18.60 SS G_CDS: -5.02 Total: 13.58 kcal Atomic # 17 Polarization: -1.22 SS G_CDS: -1.50 Total: -2.72 kcal Total LS contribution 4.20 Total: 4.20 kcal Total: -25.06 -7.12 -32.18 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000401200175.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 66.567 kcal (2) G-P(sol) polarization free energy of solvation -25.058 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 41.509 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.124 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.182 kcal (6) G-S(sol) free energy of system = (1) + (5) 34.385 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds