Wall clock time and date at job start Mon Mar 30 2020 06:36:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 H 1.09001 * 109.47305 * 2 1 4 4 C 1.53001 * 109.47170 * 120.00294 * 2 1 3 5 5 C 1.50699 * 109.47302 * 185.00293 * 4 2 1 6 6 H 1.07999 * 119.99703 * 359.97438 * 5 4 2 7 7 C 1.37877 * 119.99960 * 179.97438 * 5 4 2 8 8 N 1.31512 * 120.00095 * 179.97438 * 7 5 4 9 9 Si 1.86803 * 120.00064 * 359.97438 * 7 5 4 10 10 H 1.48500 * 109.47237 * 89.99822 * 9 7 5 11 11 H 1.48502 * 109.47145 * 209.99991 * 9 7 5 12 12 H 1.48509 * 109.46839 * 329.99904 * 9 7 5 13 13 O 1.42906 * 109.47268 * 240.00071 * 2 1 3 14 14 C 1.35913 * 117.00048 * 85.08887 * 13 2 1 15 15 C 1.38831 * 119.97178 * 174.57675 * 14 13 2 16 16 C 1.38366 * 120.23737 * 180.02562 * 15 14 13 17 17 Cl 1.73598 * 119.90938 * 179.97438 * 16 15 14 18 18 C 1.38121 * 120.18407 * 0.02562 * 16 15 14 19 19 C 1.39615 * 119.94120 * 359.97438 * 18 16 15 20 20 C 1.43208 * 120.11317 * 179.97438 * 19 18 16 21 21 N 5.80266 * 84.22385 * 322.09490 * 2 1 3 22 22 C 1.38444 * 119.97126 * 354.30149 * 14 13 2 23 23 H 1.08995 * 109.47272 * 179.97438 * 1 2 3 24 24 H 1.09000 * 109.47553 * 300.00425 * 1 2 3 25 25 H 1.09004 * 109.46779 * 59.99965 * 1 2 3 26 26 H 1.09005 * 109.46866 * 304.99855 * 4 2 1 27 27 H 1.09002 * 109.47039 * 64.99794 * 4 2 1 28 28 H 0.97006 * 120.00036 * 180.02562 * 8 7 5 29 29 H 1.07998 * 119.88609 * 0.02562 * 15 14 13 30 30 H 1.07998 * 120.02790 * 179.97438 * 18 16 15 31 31 H 1.08003 * 120.09621 * 0.02562 * 22 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0400 -0.7213 1.2492 5 6 3.5419 -0.6149 1.3128 6 1 4.0789 -0.0861 0.5393 7 6 4.2303 -1.1927 2.3584 8 7 5.5410 -1.1003 2.4136 9 14 3.3012 -2.1068 3.6966 10 1 3.1695 -3.5370 3.3193 11 1 4.0449 -1.9991 4.9774 12 1 1.9504 -1.5107 3.8569 13 8 2.0063 -0.6736 -1.1668 14 6 2.1143 0.0631 -2.3038 15 6 2.6756 -0.4977 -3.4430 16 6 2.7887 0.2475 -4.6033 17 17 3.4926 -0.4621 -6.0227 18 6 2.3441 1.5548 -4.6352 19 6 1.7783 2.1264 -3.4939 20 6 1.3166 3.4816 -3.5227 21 7 0.9460 4.5552 -3.5468 22 6 1.6592 1.3704 -2.3267 23 1 -0.3633 -1.0276 -0.0005 24 1 -0.3634 0.5139 0.8899 25 1 -0.3633 0.5139 -0.8900 26 1 1.6053 -0.2618 2.1370 27 1 1.7516 -1.7716 1.2055 28 1 6.0253 -1.5071 3.1490 29 1 3.0253 -1.5194 -3.4235 30 1 2.4339 2.1343 -5.5421 31 1 1.2187 1.8061 -1.4420 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000695839206.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:36:30 Heat of formation + Delta-G solvation = 1.984804 kcal Electronic energy + Delta-G solvation = -16885.352938 eV Core-core repulsion = 13965.089780 eV Total energy + Delta-G solvation = -2920.263158 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -40.31291 -38.08649 -36.88027 -36.05649 -33.66296 -32.05902 -31.11780 -29.89034 -28.13942 -24.29367 -23.65987 -22.48390 -20.19129 -19.45748 -16.95769 -16.74960 -16.27341 -16.12998 -15.09344 -14.94507 -14.36239 -14.04310 -13.62318 -13.31843 -13.07897 -13.04308 -12.93753 -12.45909 -12.25136 -11.98609 -11.91235 -11.78811 -11.38494 -11.16165 -10.98051 -10.78721 -10.29550 -9.99647 -9.73666 -9.33640 -8.97983 -8.61838 -8.21351 -6.10857 -4.10139 0.55536 1.11427 1.85295 2.52482 2.79674 3.25434 3.33093 3.33379 3.55368 3.66737 3.70722 4.37476 4.80514 4.88115 4.95185 5.09986 5.22842 5.31392 5.42085 5.42786 5.66581 5.88104 5.96121 5.97158 6.10491 6.25176 6.34765 6.39780 6.93253 7.01603 7.30345 7.61051 7.75044 8.42320 8.92669 9.49203 11.02344 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.019313 B = 0.005169 C = 0.004535 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1449.480467 B = 5416.046129 C = 6173.234615 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.183 4.183 2 C 0.092 3.908 3 H 0.072 0.928 4 C -0.011 4.011 5 C -0.520 4.520 6 H 0.074 0.926 7 C 0.069 3.931 8 N -0.899 5.899 9 Si 0.878 3.122 10 H -0.276 1.276 11 H -0.287 1.287 12 H -0.266 1.266 13 O -0.279 6.279 14 C 0.168 3.832 15 C -0.121 4.121 16 C 0.002 3.998 17 Cl -0.058 7.058 18 C -0.115 4.115 19 C 0.021 3.979 20 C 0.261 3.739 21 N -0.414 5.414 22 C -0.165 4.165 23 H 0.065 0.935 24 H 0.071 0.929 25 H 0.053 0.947 26 H 0.039 0.961 27 H 0.026 0.974 28 H 0.264 0.736 29 H 0.150 0.850 30 H 0.140 0.860 31 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.332 1.562 -12.613 15.197 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.240 4.240 2 C 0.036 3.964 3 H 0.090 0.910 4 C -0.048 4.048 5 C -0.558 4.558 6 H 0.092 0.908 7 C -0.132 4.132 8 N -0.537 5.537 9 Si 0.705 3.295 10 H -0.201 1.201 11 H -0.213 1.213 12 H -0.191 1.191 13 O -0.191 6.191 14 C 0.120 3.880 15 C -0.141 4.141 16 C -0.024 4.024 17 Cl -0.029 7.029 18 C -0.137 4.137 19 C 0.018 3.982 20 C -0.054 4.054 21 N -0.089 5.089 22 C -0.187 4.187 23 H 0.085 0.915 24 H 0.090 0.910 25 H 0.072 0.928 26 H 0.057 0.943 27 H 0.044 0.956 28 H 0.074 0.926 29 H 0.168 0.832 30 H 0.158 0.842 31 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges -8.647 2.907 -12.604 15.559 hybrid contribution -0.128 -0.813 0.759 1.120 sum -8.775 2.093 -11.845 14.889 Atomic orbital electron populations 1.22477 0.96461 1.03039 1.02045 1.22740 0.91926 0.97379 0.84311 0.91030 1.19754 0.98280 0.96330 0.90420 1.20979 0.89215 1.35840 1.09762 0.90806 1.24987 0.94730 0.95733 0.97794 1.69902 1.06524 1.45024 1.32252 0.86822 0.80313 0.80741 0.81643 1.20131 1.21305 1.19087 1.86330 1.79487 1.37393 1.15879 1.18692 0.92079 0.89385 0.87863 1.20500 1.01897 1.02041 0.89640 1.20238 1.00184 0.93250 0.88767 1.98383 1.82472 1.83764 1.38251 1.20745 1.00891 0.93829 0.98188 1.15450 1.01870 0.86261 0.94646 1.25523 0.93627 0.92580 0.93708 1.81243 1.08779 1.11472 1.07407 1.21488 1.04496 0.94217 0.98479 0.91545 0.91008 0.92831 0.94270 0.95553 0.92617 0.83234 0.84175 0.83590 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -2.51 9.17 37.16 0.34 -2.17 16 2 C 0.09 1.62 2.17 -26.73 -0.06 1.56 16 3 H 0.07 1.23 6.31 -51.93 -0.33 0.90 16 4 C -0.01 -0.23 3.75 -27.88 -0.10 -0.34 16 5 C -0.52 -13.99 9.43 -34.44 -0.32 -14.32 16 6 H 0.07 2.17 7.99 -52.49 -0.42 1.75 16 7 C 0.07 1.94 5.47 -17.82 -0.10 1.84 16 8 N -0.90 -26.88 13.96 55.43 0.77 -26.10 16 9 Si 0.88 20.66 27.47 -169.99 -4.67 15.99 16 10 H -0.28 -6.42 7.11 56.52 0.40 -6.02 16 11 H -0.29 -6.76 7.11 56.52 0.40 -6.36 16 12 H -0.27 -5.89 6.54 56.52 0.37 -5.52 16 13 O -0.28 -5.02 9.55 -19.47 -0.19 -5.21 16 14 C 0.17 2.51 6.60 -39.29 -0.26 2.25 16 15 C -0.12 -1.61 9.76 -39.32 -0.38 -1.99 16 16 C 0.00 0.03 6.31 -39.58 -0.25 -0.22 16 17 Cl -0.06 -0.61 28.95 -51.86 -1.50 -2.11 16 18 C -0.12 -1.25 9.53 -39.11 -0.37 -1.62 16 19 C 0.02 0.26 5.73 -106.95 -0.61 -0.36 16 20 C 0.26 3.34 15.33 -22.47 -0.34 2.99 16 21 N -0.41 -6.01 18.54 41.84 0.78 -5.23 16 22 C -0.17 -2.19 7.95 -39.01 -0.31 -2.50 16 23 H 0.07 0.90 8.14 -51.93 -0.42 0.48 16 24 H 0.07 0.90 8.14 -51.93 -0.42 0.47 16 25 H 0.05 0.64 6.91 -51.93 -0.36 0.28 16 26 H 0.04 0.83 7.20 -51.93 -0.37 0.46 16 27 H 0.03 0.58 7.57 -51.93 -0.39 0.18 16 28 H 0.26 7.40 8.31 -40.82 -0.34 7.06 16 29 H 0.15 1.91 8.06 -52.49 -0.42 1.49 16 30 H 0.14 1.23 8.06 -52.49 -0.42 0.81 16 31 H 0.15 1.84 5.41 -52.48 -0.28 1.56 16 LS Contribution 292.50 15.07 4.41 4.41 Total: -1.00 -29.40 292.50 -6.19 -35.59 By element: Atomic # 1 Polarization: 0.55 SS G_CDS: -3.01 Total: -2.47 kcal Atomic # 6 Polarization: -12.09 SS G_CDS: -2.78 Total: -14.87 kcal Atomic # 7 Polarization: -32.88 SS G_CDS: 1.55 Total: -31.34 kcal Atomic # 8 Polarization: -5.02 SS G_CDS: -0.19 Total: -5.21 kcal Atomic # 14 Polarization: 20.66 SS G_CDS: -4.67 Total: 15.99 kcal Atomic # 17 Polarization: -0.61 SS G_CDS: -1.50 Total: -2.11 kcal Total LS contribution 4.41 Total: 4.41 kcal Total: -29.40 -6.19 -35.59 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000695839206.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 37.575 kcal (2) G-P(sol) polarization free energy of solvation -29.400 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.175 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.190 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.590 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.985 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds