Wall clock time and date at job start Mon Mar 30 2020 07:50:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35926 * 117.00617 * 2 1 4 4 C 1.38856 * 120.05899 * 270.30060 * 3 2 1 5 5 Cl 1.73602 * 120.03848 * 359.97438 * 4 3 2 6 6 C 1.38214 * 119.92134 * 180.31043 * 4 3 2 7 7 C 1.38290 * 120.04325 * 359.66103 * 6 4 3 8 8 C 1.38233 * 120.11773 * 0.02562 * 7 6 4 9 9 C 1.38190 * 120.07877 * 0.02562 * 8 7 6 10 10 C 1.50700 * 120.02346 * 179.97438 * 9 8 7 11 11 H 1.09004 * 109.47406 * 180.02562 * 10 9 8 12 12 C 1.50706 * 109.47062 * 299.99721 * 10 9 8 13 13 H 1.07998 * 119.99503 * 0.02562 * 12 10 9 14 14 C 1.37871 * 120.00434 * 179.97438 * 12 10 9 15 15 N 1.31516 * 119.99826 * 359.72891 * 14 12 10 16 16 Si 1.86800 * 120.00406 * 180.02562 * 14 12 10 17 17 H 1.48501 * 109.47364 * 179.72558 * 16 14 12 18 18 H 1.48508 * 109.46883 * 299.72681 * 16 14 12 19 19 H 1.48497 * 109.46870 * 59.72491 * 16 14 12 20 20 C 1.52991 * 109.47315 * 59.99984 * 10 9 8 21 21 C 1.53003 * 117.50168 * 128.75262 * 20 10 9 22 22 C 1.52998 * 117.49954 * 60.08957 * 20 10 9 23 23 H 1.08999 * 109.47124 * 60.00195 * 1 2 3 24 24 H 1.08997 * 109.47314 * 179.97438 * 1 2 3 25 25 H 1.08997 * 109.46700 * 300.00269 * 1 2 3 26 26 H 1.07999 * 119.97847 * 179.67930 * 6 4 3 27 27 H 1.07997 * 119.94147 * 179.97438 * 7 6 4 28 28 H 1.07998 * 119.96210 * 180.02562 * 8 7 6 29 29 H 0.97000 * 120.00236 * 0.27947 * 15 14 12 30 30 H 1.08999 * 115.55163 * 274.41883 * 20 10 9 31 31 H 1.09002 * 117.49518 * 359.97438 * 21 20 10 32 32 H 1.08993 * 117.50661 * 145.02064 * 21 20 10 33 33 H 1.08997 * 117.50075 * 214.98129 * 22 20 10 34 34 H 1.09002 * 117.49630 * 359.97438 * 22 20 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2110 0.0000 4 6 2.3564 1.8336 -1.2018 5 17 1.9570 1.0658 -2.7067 6 6 2.9898 3.0620 -1.1985 7 6 3.3080 3.6738 0.0002 8 6 2.9941 3.0585 1.1976 9 6 2.3618 1.8298 1.2002 10 6 2.0207 1.1600 2.5063 11 1 1.5302 0.2068 2.3087 12 6 3.2837 0.9207 3.2929 13 1 4.2378 1.2238 2.8877 14 6 3.2211 0.3158 4.5303 15 7 2.0586 -0.0475 5.0265 16 14 4.7865 0.0198 5.5057 17 1 4.4498 -0.6338 6.7959 18 1 5.6957 -0.8597 4.7276 19 1 5.4586 1.3176 5.7688 20 6 1.0814 2.0603 3.3112 21 6 -0.2069 1.4350 3.8500 22 6 -0.2649 2.4204 2.6799 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3634 -1.0276 -0.0005 25 1 -0.3632 0.5139 0.8900 26 1 3.2362 3.5447 -2.1327 27 1 3.8033 4.6335 0.0009 28 1 3.2434 3.5387 2.1323 29 1 1.2457 0.1063 4.5202 30 1 1.5681 2.8180 3.9253 31 1 -0.3855 0.3824 3.6306 32 1 -0.5680 1.7816 4.8182 33 1 -0.6641 3.4149 2.8790 34 1 -0.4813 2.0163 1.6910 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000084425231.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:50:59 Heat of formation + Delta-G solvation = -0.484409 kcal Electronic energy + Delta-G solvation = -18544.220173 eV Core-core repulsion = 15661.964374 eV Total energy + Delta-G solvation = -2882.255799 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -39.83320 -37.11969 -36.84157 -36.02248 -32.85969 -31.15300 -29.75316 -27.18901 -26.28869 -23.45490 -22.22518 -21.77357 -21.30194 -19.35378 -17.40385 -16.92877 -15.97639 -15.62532 -15.21745 -14.55295 -14.04487 -13.81171 -13.71754 -13.33414 -13.06613 -12.73777 -12.16010 -11.89691 -11.49637 -11.36416 -11.00835 -10.85460 -10.82066 -10.72372 -10.35216 -10.30453 -10.07070 -9.62021 -9.53861 -9.14572 -8.63967 -8.33416 -8.20956 -7.96991 -6.28313 -4.07788 1.48680 1.70513 2.42490 3.43915 3.46274 3.64187 3.84040 4.30380 4.54156 4.66148 5.16382 5.32456 5.40086 5.51021 5.55752 5.63650 5.68851 5.81752 5.82523 5.86993 5.92153 5.94962 6.28654 6.34350 6.48588 6.57663 6.71610 6.75871 6.80665 6.94073 7.09009 7.19977 7.57028 7.90340 8.13739 8.43789 8.90847 9.65327 11.08407 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.020718 B = 0.007205 C = 0.006628 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1351.168187 B = 3885.087892 C = 4223.296853 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.320 6.320 3 C 0.089 3.911 4 C -0.055 4.055 5 Cl -0.080 7.080 6 C -0.127 4.127 7 C -0.118 4.118 8 C -0.092 4.092 9 C -0.025 4.025 10 C 0.093 3.907 11 H 0.039 0.961 12 C -0.594 4.594 13 H 0.052 0.948 14 C 0.027 3.973 15 N -0.911 5.911 16 Si 1.064 2.936 17 H -0.283 1.283 18 H -0.288 1.288 19 H -0.289 1.289 20 C -0.106 4.106 21 C -0.166 4.166 22 C -0.215 4.215 23 H 0.040 0.960 24 H 0.090 0.910 25 H 0.053 0.947 26 H 0.126 0.874 27 H 0.126 0.874 28 H 0.133 0.867 29 H 0.284 0.716 30 H 0.093 0.907 31 H 0.087 0.913 32 H 0.083 0.917 33 H 0.079 0.921 34 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.684 5.624 -9.562 11.413 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 O -0.236 6.236 3 C 0.045 3.955 4 C -0.082 4.082 5 Cl -0.051 7.051 6 C -0.146 4.146 7 C -0.137 4.137 8 C -0.110 4.110 9 C -0.026 4.026 10 C 0.075 3.925 11 H 0.057 0.943 12 C -0.632 4.632 13 H 0.070 0.930 14 C -0.179 4.179 15 N -0.548 5.548 16 Si 0.892 3.108 17 H -0.208 1.208 18 H -0.215 1.215 19 H -0.215 1.215 20 C -0.125 4.125 21 C -0.203 4.203 22 C -0.252 4.252 23 H 0.059 0.941 24 H 0.108 0.892 25 H 0.071 0.929 26 H 0.144 0.856 27 H 0.144 0.856 28 H 0.151 0.849 29 H 0.098 0.902 30 H 0.111 0.889 31 H 0.106 0.894 32 H 0.102 0.898 33 H 0.097 0.903 34 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -2.082 4.740 -8.267 9.755 hybrid contribution -0.739 0.739 -1.613 1.923 sum -2.822 5.480 -9.881 11.645 Atomic orbital electron populations 1.23083 0.79735 1.02984 1.00531 1.86072 1.19248 1.24245 1.94038 1.18362 0.99539 0.87197 0.90433 1.21317 1.05633 0.95307 0.85934 1.98318 1.92886 1.81768 1.32140 1.20733 1.01132 0.93850 0.98891 1.21084 1.00655 1.00089 0.91845 1.21112 0.96915 0.94848 0.98108 1.20623 0.93774 0.93005 0.95187 1.17631 0.95669 0.92535 0.86683 0.94279 1.21798 0.91760 1.44726 1.04883 0.93016 1.25681 1.03164 0.93407 0.95638 1.70747 0.99318 1.43555 1.41216 0.83623 0.74444 0.76484 0.76233 1.20837 1.21480 1.21513 1.22714 0.87835 1.01144 1.00796 1.22778 1.03371 0.97592 0.96588 1.23157 1.05116 0.99535 0.97393 0.94092 0.89163 0.92893 0.85568 0.85642 0.84945 0.90169 0.88910 0.89444 0.89849 0.90275 0.90089 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.50 10.88 101.05 1.10 1.60 16 2 O -0.32 -6.43 8.72 -19.51 -0.17 -6.60 16 3 C 0.09 1.78 5.69 -39.19 -0.22 1.56 16 4 C -0.05 -0.96 6.33 -39.36 -0.25 -1.21 16 5 Cl -0.08 -1.24 28.51 -51.86 -1.48 -2.72 16 6 C -0.13 -1.96 9.83 -39.57 -0.39 -2.35 16 7 C -0.12 -1.83 10.04 -39.56 -0.40 -2.23 16 8 C -0.09 -1.71 8.82 -39.60 -0.35 -2.06 16 9 C -0.03 -0.53 4.40 -104.48 -0.46 -0.99 16 10 C 0.09 2.22 1.82 -92.93 -0.17 2.05 16 11 H 0.04 1.02 6.36 -51.93 -0.33 0.69 16 12 C -0.59 -15.95 8.22 -34.44 -0.28 -16.23 16 13 H 0.05 1.40 7.60 -52.49 -0.40 1.00 16 14 C 0.03 0.75 5.31 -17.82 -0.09 0.66 16 15 N -0.91 -26.09 13.37 55.43 0.74 -25.35 16 16 Si 1.06 24.64 29.90 -169.99 -5.08 19.56 16 17 H -0.28 -6.60 7.11 56.52 0.40 -6.20 16 18 H -0.29 -6.52 7.11 56.52 0.40 -6.12 16 19 H -0.29 -6.37 7.11 56.52 0.40 -5.97 16 20 C -0.11 -2.30 3.86 -90.62 -0.35 -2.65 16 21 C -0.17 -3.37 8.13 -26.69 -0.22 -3.58 16 22 C -0.22 -3.93 9.83 -26.69 -0.26 -4.19 16 23 H 0.04 0.59 8.14 -51.93 -0.42 0.17 16 24 H 0.09 1.26 8.14 -51.93 -0.42 0.84 16 25 H 0.05 0.88 5.46 -51.93 -0.28 0.60 16 26 H 0.13 1.60 8.06 -52.49 -0.42 1.17 16 27 H 0.13 1.53 8.06 -52.49 -0.42 1.10 16 28 H 0.13 2.45 8.05 -52.49 -0.42 2.02 16 29 H 0.28 7.76 3.55 -40.82 -0.14 7.61 16 30 H 0.09 2.12 8.11 -51.93 -0.42 1.70 16 31 H 0.09 1.84 7.43 -51.93 -0.39 1.45 16 32 H 0.08 1.62 8.14 -51.93 -0.42 1.20 16 33 H 0.08 1.30 8.14 -51.93 -0.42 0.88 16 34 H 0.08 1.44 5.56 -51.93 -0.29 1.15 16 LS Contribution 295.78 15.07 4.46 4.46 Total: -1.00 -29.09 295.78 -7.89 -36.97 By element: Atomic # 1 Polarization: 7.32 SS G_CDS: -4.01 Total: 3.31 kcal Atomic # 6 Polarization: -27.29 SS G_CDS: -2.34 Total: -29.63 kcal Atomic # 7 Polarization: -26.09 SS G_CDS: 0.74 Total: -25.35 kcal Atomic # 8 Polarization: -6.43 SS G_CDS: -0.17 Total: -6.60 kcal Atomic # 14 Polarization: 24.64 SS G_CDS: -5.08 Total: 19.56 kcal Atomic # 17 Polarization: -1.24 SS G_CDS: -1.48 Total: -2.72 kcal Total LS contribution 4.46 Total: 4.46 kcal Total: -29.09 -7.89 -36.97 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000084425231.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.490 kcal (2) G-P(sol) polarization free energy of solvation -29.090 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.401 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.885 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.975 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.484 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds