Wall clock time and date at job start Mon Mar 30 2020 07:50:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.35669 * 116.99947 * 2 1 4 4 C 1.38560 * 120.41702 * 275.14014 * 3 2 1 5 5 Cl 1.73601 * 120.10885 * 0.09594 * 4 3 2 6 6 C 1.38043 * 119.78969 * 180.29182 * 4 3 2 7 7 C 1.39607 * 121.27784 * 359.58678 * 6 4 3 8 8 C 1.35951 * 120.03000 * 0.13506 * 7 6 4 9 9 C 1.40976 * 120.41515 * 95.15325 * 3 2 1 10 10 C 1.41164 * 119.97839 * 0.09140 * 9 3 2 11 11 H 1.07998 * 119.99482 * 217.27451 * 10 9 3 12 12 C 1.39926 * 119.99881 * 37.27506 * 10 9 3 13 13 N 1.30876 * 119.99717 * 212.46769 * 12 10 9 14 14 Si 1.86798 * 120.00290 * 32.47559 * 12 10 9 15 15 H 1.48498 * 109.47521 * 92.04910 * 14 12 10 16 16 H 1.48501 * 109.47067 * 212.04518 * 14 12 10 17 17 H 1.48499 * 109.47006 * 332.04301 * 14 12 10 18 18 C 1.50639 * 122.82412 * 180.32863 * 8 7 6 19 19 C 1.52714 * 110.67754 * 342.34212 * 18 8 7 20 20 C 1.53354 * 108.24446 * 50.85589 * 19 18 8 21 21 C 1.50727 * 117.34182 * 179.86530 * 7 6 4 22 22 H 1.08998 * 109.46925 * 184.82338 * 1 2 3 23 23 H 1.08993 * 109.46701 * 304.82505 * 1 2 3 24 24 H 1.08998 * 109.46687 * 64.82871 * 1 2 3 25 25 H 1.07993 * 119.35769 * 179.97438 * 6 4 3 26 26 H 0.96992 * 119.99753 * 179.97438 * 13 12 10 27 27 H 1.09000 * 109.23282 * 102.65012 * 18 8 7 28 28 H 1.09001 * 109.23643 * 222.03102 * 18 8 7 29 29 H 1.08999 * 109.70625 * 170.54765 * 19 18 8 30 30 H 1.09005 * 109.70817 * 291.16730 * 19 18 8 31 31 H 1.08998 * 109.69955 * 50.27591 * 20 19 18 32 32 H 1.09003 * 109.70044 * 170.83222 * 20 19 18 33 33 H 1.08996 * 109.23425 * 282.87746 * 21 7 6 34 34 H 1.09004 * 109.23223 * 42.25518 * 21 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0450 1.2088 0.0000 4 6 2.2681 1.8825 -1.1901 5 17 1.7574 1.1840 -2.6951 6 6 2.9014 3.1090 -1.1756 7 6 3.3182 3.6954 0.0208 8 6 3.1056 3.0566 1.2019 9 6 2.4663 1.7952 1.2108 10 6 2.2497 1.1229 2.4330 11 1 1.9865 1.6830 3.3181 12 6 2.3759 -0.2692 2.4977 13 7 1.6260 -0.9567 3.3210 14 14 3.6150 -1.1463 1.4092 15 1 4.9011 -1.2882 2.1379 16 1 3.0965 -2.4917 1.0537 17 1 3.8322 -0.3564 0.1706 18 6 3.5225 3.6342 2.5293 19 6 4.5535 4.7438 2.3346 20 6 4.0079 5.7288 1.2935 21 6 4.0035 5.0350 -0.0667 22 1 -0.3633 -1.0240 0.0864 23 1 -0.3632 0.5868 0.8436 24 1 -0.3633 0.4371 -0.9301 25 1 3.0720 3.6278 -2.1072 26 1 1.7132 -1.9216 3.3655 27 1 2.6469 4.0421 3.0343 28 1 3.9557 2.8453 3.1441 29 1 4.7190 5.2617 3.2793 30 1 5.4913 4.3162 1.9800 31 1 2.9922 6.0205 1.5605 32 1 4.6454 6.6122 1.2539 33 1 5.0314 4.8914 -0.3998 34 1 3.4774 5.6611 -0.7874 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000216968061.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:50:10 Heat of formation + Delta-G solvation = -45.464668 kcal Electronic energy + Delta-G solvation = -18718.514358 eV Core-core repulsion = 15834.308069 eV Total energy + Delta-G solvation = -2884.206289 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -39.26363 -37.33068 -35.69877 -34.30241 -33.58152 -31.62509 -28.84475 -28.50900 -26.14389 -24.83045 -22.79191 -21.64823 -20.62193 -18.74716 -17.45831 -16.32371 -15.64169 -15.17875 -14.74536 -14.30487 -13.89145 -13.58932 -13.23584 -12.96507 -12.72840 -12.37275 -12.28921 -11.81264 -11.64594 -11.51929 -11.28989 -11.09120 -10.80092 -10.53231 -10.38382 -10.29151 -9.97775 -9.76642 -9.73318 -9.55627 -9.03763 -8.67066 -7.48321 -7.28042 -7.01363 -4.51164 2.32640 2.46551 3.10817 3.23031 3.29473 3.47322 4.19034 4.27599 4.87986 5.23113 5.36555 5.37831 5.41784 5.86535 5.99601 6.08646 6.10529 6.16027 6.20414 6.24788 6.28960 6.44044 6.46272 6.48371 6.56769 6.72689 6.78934 6.85899 6.97278 7.14070 7.31510 7.53431 7.74307 7.81806 8.19531 8.40398 8.67665 8.89249 9.95447 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.016016 B = 0.011227 C = 0.007592 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1747.782944 B = 2493.343479 C = 3687.146847 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 O -0.313 6.313 3 C -0.020 4.020 4 C 0.000 4.000 5 Cl -0.111 7.111 6 C -0.232 4.232 7 C -0.042 4.042 8 C -0.151 4.151 9 C 0.082 3.918 10 C -0.446 4.446 11 H 0.095 0.905 12 C 0.117 3.883 13 N -0.783 5.783 14 Si 0.907 3.093 15 H -0.287 1.287 16 H -0.280 1.280 17 H -0.230 1.230 18 C -0.056 4.056 19 C -0.119 4.119 20 C -0.116 4.116 21 C -0.072 4.072 22 H 0.071 0.929 23 H 0.044 0.956 24 H 0.030 0.970 25 H 0.103 0.897 26 H 0.286 0.714 27 H 0.056 0.944 28 H 0.073 0.927 29 H 0.055 0.945 30 H 0.060 0.940 31 H 0.061 0.939 32 H 0.055 0.945 33 H 0.064 0.936 34 H 0.062 0.938 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.169 5.840 -3.476 7.134 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.229 6.229 3 C -0.065 4.065 4 C -0.027 4.027 5 Cl -0.083 7.083 6 C -0.252 4.252 7 C -0.043 4.043 8 C -0.152 4.152 9 C 0.078 3.922 10 C -0.471 4.471 11 H 0.113 0.887 12 C -0.107 4.107 13 N -0.404 5.404 14 Si 0.732 3.268 15 H -0.214 1.214 16 H -0.206 1.206 17 H -0.153 1.153 18 C -0.093 4.093 19 C -0.156 4.156 20 C -0.153 4.153 21 C -0.109 4.109 22 H 0.089 0.911 23 H 0.062 0.938 24 H 0.048 0.952 25 H 0.121 0.879 26 H 0.096 0.904 27 H 0.074 0.926 28 H 0.092 0.908 29 H 0.074 0.926 30 H 0.078 0.922 31 H 0.080 0.920 32 H 0.074 0.926 33 H 0.083 0.917 34 H 0.081 0.919 Dipole moment (debyes) X Y Z Total from point charges 2.068 5.378 -3.444 6.713 hybrid contribution 0.041 -0.518 -0.609 0.801 sum 2.109 4.859 -4.053 6.670 Atomic orbital electron populations 1.22748 0.82463 1.01173 0.99359 1.85974 1.18003 1.25345 1.93579 1.18064 1.06378 0.91307 0.90765 1.21048 1.02352 0.94945 0.84326 1.98263 1.90289 1.85120 1.34610 1.20100 1.11660 0.96296 0.97160 1.18792 0.98500 0.94813 0.92188 1.19255 1.04494 0.97969 0.93443 1.17780 0.91139 0.91555 0.91695 1.19228 1.40528 0.91536 0.95840 0.88723 1.26075 0.94070 0.97401 0.93197 1.69847 1.29391 1.09325 1.31864 0.86061 0.79139 0.78927 0.82682 1.21400 1.20581 1.15313 1.20120 0.97367 0.96717 0.95121 1.21577 0.99128 0.96867 0.98056 1.21510 1.00971 0.97405 0.95443 1.20361 0.99686 0.93762 0.97107 0.91067 0.93761 0.95183 0.87863 0.90399 0.92556 0.90825 0.92592 0.92172 0.92015 0.92635 0.91718 0.91936 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.78 11.05 101.05 1.12 1.89 16 2 O -0.31 -7.48 5.64 -18.71 -0.11 -7.58 16 3 C -0.02 -0.48 3.74 -38.43 -0.14 -0.62 16 4 C 0.00 0.00 6.32 -39.53 -0.25 -0.25 16 5 Cl -0.11 -2.23 28.05 -51.86 -1.45 -3.68 16 6 C -0.23 -4.85 9.37 -39.14 -0.37 -5.22 16 7 C -0.04 -0.85 5.71 -104.92 -0.60 -1.45 16 8 C -0.15 -3.27 5.76 -104.26 -0.60 -3.88 16 9 C 0.08 2.00 4.81 -106.54 -0.51 1.48 16 10 C -0.45 -11.31 8.01 -37.84 -0.30 -11.62 16 11 H 0.10 2.48 7.54 -52.49 -0.40 2.08 16 12 C 0.12 2.95 4.50 -17.33 -0.08 2.88 16 13 N -0.78 -19.93 13.93 55.55 0.77 -19.16 16 14 Si 0.91 21.49 25.57 -169.99 -4.35 17.15 16 15 H -0.29 -6.61 7.11 56.52 0.40 -6.21 16 16 H -0.28 -6.56 7.11 56.52 0.40 -6.16 16 17 H -0.23 -5.77 5.76 56.52 0.33 -5.44 16 18 C -0.06 -1.06 4.75 -28.06 -0.13 -1.20 16 19 C -0.12 -1.82 5.99 -26.69 -0.16 -1.98 16 20 C -0.12 -1.66 5.99 -26.70 -0.16 -1.82 16 21 C -0.07 -1.14 5.65 -28.03 -0.16 -1.30 16 22 H 0.07 1.34 8.14 -51.93 -0.42 0.91 16 23 H 0.04 0.96 8.14 -51.93 -0.42 0.54 16 24 H 0.03 0.58 7.73 -51.93 -0.40 0.17 16 25 H 0.10 1.95 8.05 -52.49 -0.42 1.53 16 26 H 0.29 6.71 8.30 -40.82 -0.34 6.37 16 27 H 0.06 1.05 8.14 -51.93 -0.42 0.63 16 28 H 0.07 1.46 7.34 -51.93 -0.38 1.08 16 29 H 0.06 0.74 8.14 -51.93 -0.42 0.32 16 30 H 0.06 0.92 8.10 -51.93 -0.42 0.50 16 31 H 0.06 0.90 8.10 -51.93 -0.42 0.48 16 32 H 0.05 0.66 8.14 -51.93 -0.42 0.24 16 33 H 0.06 0.97 8.14 -51.93 -0.42 0.55 16 34 H 0.06 0.91 8.12 -51.93 -0.42 0.49 16 LS Contribution 286.95 15.07 4.32 4.32 Total: -1.00 -26.20 286.95 -7.77 -33.97 By element: Atomic # 1 Polarization: 2.68 SS G_CDS: -4.61 Total: -1.93 kcal Atomic # 6 Polarization: -20.73 SS G_CDS: -2.35 Total: -23.08 kcal Atomic # 7 Polarization: -19.93 SS G_CDS: 0.77 Total: -19.16 kcal Atomic # 8 Polarization: -7.48 SS G_CDS: -0.11 Total: -7.58 kcal Atomic # 14 Polarization: 21.49 SS G_CDS: -4.35 Total: 17.15 kcal Atomic # 17 Polarization: -2.23 SS G_CDS: -1.45 Total: -3.68 kcal Total LS contribution 4.32 Total: 4.32 kcal Total: -26.20 -7.77 -33.97 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000216968061.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.499 kcal (2) G-P(sol) polarization free energy of solvation -26.197 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.697 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.768 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.965 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.465 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds