Wall clock time and date at job start Mon Mar 30 2020 07:50:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35915 * 117.00066 * 2 1 4 4 C 1.38739 * 120.04414 * 0.02562 * 3 2 1 5 5 C 1.38118 * 119.96224 * 179.97438 * 4 3 2 6 6 C 1.38394 * 120.04049 * 359.72652 * 5 4 3 7 7 Cl 1.73602 * 119.96031 * 180.29248 * 6 5 4 8 8 C 1.38341 * 120.08278 * 0.55151 * 6 5 4 9 9 C 1.50702 * 119.98135 * 179.72548 * 8 6 5 10 10 H 1.08999 * 109.46863 * 359.71956 * 9 8 6 11 11 C 1.50690 * 109.47409 * 119.72119 * 9 8 6 12 12 H 1.08004 * 120.00130 * 64.83924 * 11 9 8 13 13 C 1.37870 * 120.00466 * 244.83772 * 11 9 8 14 14 N 1.31514 * 120.00360 * 184.70646 * 13 11 9 15 15 Si 1.86801 * 119.99807 * 4.70709 * 13 11 9 16 16 H 1.48501 * 109.47268 * 84.56690 * 15 13 11 17 17 H 1.48505 * 109.47250 * 204.56964 * 15 13 11 18 18 H 1.48500 * 109.46902 * 324.56571 * 15 13 11 19 19 C 1.53006 * 109.47190 * 239.72522 * 9 8 6 20 20 C 1.52998 * 117.49958 * 123.99767 * 19 9 8 21 21 C 1.53005 * 117.49661 * 55.33883 * 19 9 8 22 22 C 1.38165 * 120.04175 * 359.44997 * 8 6 5 23 23 H 1.09004 * 109.46882 * 180.02562 * 1 2 3 24 24 H 1.08998 * 109.47030 * 300.00141 * 1 2 3 25 25 H 1.08994 * 109.46770 * 60.00562 * 1 2 3 26 26 H 1.08005 * 120.02219 * 0.02562 * 4 3 2 27 27 H 1.08004 * 119.98457 * 180.02562 * 5 4 3 28 28 H 0.97002 * 120.00238 * 179.97438 * 14 13 11 29 29 H 1.08997 * 115.54711 * 269.67750 * 19 9 8 30 30 H 1.09005 * 117.49949 * 0.02562 * 20 19 9 31 31 H 1.09003 * 117.49859 * 145.01903 * 20 19 9 32 32 H 1.08996 * 117.49725 * 214.97592 * 21 19 9 33 33 H 1.09003 * 117.49945 * 0.02562 * 21 19 9 34 34 H 1.08008 * 120.02131 * 180.25742 * 22 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2110 0.0000 4 6 1.2914 2.3752 0.0005 5 6 1.9202 3.6049 0.0011 6 6 3.3023 3.6763 0.0068 7 17 4.0905 5.2231 0.0151 8 6 4.0566 2.5167 0.0005 9 6 5.5615 2.5971 0.0005 10 1 5.8694 3.6427 0.0008 11 6 6.1011 1.9141 1.2305 12 1 5.9628 0.8511 1.3625 13 6 6.7714 2.6460 2.1875 14 7 7.3226 2.0371 3.2146 15 14 6.8968 4.5028 2.0251 16 1 5.6762 5.1326 2.5896 17 1 8.0903 4.9850 2.7656 18 1 7.0237 4.8667 0.5910 19 6 6.1093 1.9047 -1.2492 20 6 7.0178 2.7227 -2.1691 21 6 5.5907 2.3835 -2.6067 22 6 3.4312 1.2847 -0.0001 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3633 0.5138 0.8900 25 1 -0.3633 0.5137 -0.8900 26 1 0.2128 2.3199 0.0014 27 1 1.3330 4.5114 0.0019 28 1 7.7945 2.5520 3.8877 29 1 6.3282 0.8426 -1.1402 30 1 7.2257 3.7540 -1.8839 31 1 7.8344 2.1986 -2.6657 32 1 5.4691 1.6364 -3.3910 33 1 4.8596 3.1920 -2.6096 34 1 4.0204 0.3795 -0.0009 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260059995.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:50:40 Heat of formation + Delta-G solvation = 0.271604 kcal Electronic energy + Delta-G solvation = -18219.980989 eV Core-core repulsion = 15337.757974 eV Total energy + Delta-G solvation = -2882.223015 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 1.59 seconds Orbital eigenvalues (eV) -39.84475 -37.94660 -36.36494 -35.58501 -32.95763 -31.31551 -29.85237 -27.75354 -26.92344 -23.34358 -22.38533 -21.71397 -21.09972 -19.12470 -17.41498 -17.09062 -16.03864 -15.79970 -15.52758 -14.93451 -14.23798 -13.93829 -13.54063 -13.21588 -12.95888 -12.77444 -12.36960 -12.11964 -11.79636 -11.65135 -11.31164 -10.94870 -10.82891 -10.76430 -10.52525 -10.20777 -10.16376 -9.71601 -9.61544 -9.08516 -8.96423 -8.58165 -8.17607 -7.62799 -6.13766 -4.14017 1.75128 1.82923 2.75511 3.32480 3.38403 3.42283 3.53269 4.16829 4.40220 4.56830 5.02917 5.15741 5.20549 5.24387 5.26243 5.46335 5.51675 5.68502 5.78297 5.81044 5.90925 6.12952 6.21887 6.37736 6.41186 6.49929 6.65951 6.69449 6.75582 6.76942 7.08872 7.20465 7.33591 7.64760 7.71438 8.43619 8.90294 9.47887 10.98021 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.017219 B = 0.008142 C = 0.008017 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1625.762288 B = 3438.109889 C = 3491.576703 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.317 6.317 3 C 0.126 3.874 4 C -0.224 4.224 5 C -0.074 4.074 6 C -0.085 4.085 7 Cl -0.085 7.085 8 C 0.022 3.978 9 C 0.054 3.946 10 H 0.070 0.930 11 C -0.500 4.500 12 H 0.079 0.921 13 C 0.079 3.921 14 N -0.892 5.892 15 Si 0.863 3.137 16 H -0.266 1.266 17 H -0.292 1.292 18 H -0.257 1.257 19 C -0.111 4.111 20 C -0.184 4.184 21 C -0.198 4.198 22 C -0.123 4.123 23 H 0.095 0.905 24 H 0.053 0.947 25 H 0.051 0.949 26 H 0.126 0.874 27 H 0.125 0.875 28 H 0.266 0.734 29 H 0.099 0.901 30 H 0.086 0.914 31 H 0.084 0.916 32 H 0.081 0.919 33 H 0.084 0.916 34 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.178 1.324 -8.380 14.033 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.230 6.230 3 C 0.081 3.919 4 C -0.243 4.243 5 C -0.093 4.093 6 C -0.112 4.112 7 Cl -0.056 7.056 8 C 0.020 3.980 9 C 0.035 3.965 10 H 0.088 0.912 11 C -0.537 4.537 12 H 0.097 0.903 13 C -0.124 4.124 14 N -0.528 5.528 15 Si 0.691 3.309 16 H -0.191 1.191 17 H -0.218 1.218 18 H -0.182 1.182 19 C -0.129 4.129 20 C -0.221 4.221 21 C -0.235 4.235 22 C -0.142 4.142 23 H 0.113 0.887 24 H 0.071 0.929 25 H 0.070 0.930 26 H 0.143 0.857 27 H 0.143 0.857 28 H 0.075 0.925 29 H 0.117 0.883 30 H 0.104 0.896 31 H 0.102 0.898 32 H 0.100 0.900 33 H 0.103 0.897 34 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -10.909 1.290 -8.185 13.699 hybrid contribution -0.154 1.291 0.157 1.309 sum -11.063 2.581 -8.028 13.910 Atomic orbital electron populations 1.22980 0.79194 1.03391 1.01063 1.86084 1.20724 1.27272 1.88955 1.19116 0.92475 0.83743 0.96597 1.20865 0.99349 0.91735 1.12391 1.20616 0.92245 0.97502 0.98940 1.20715 0.92279 0.86246 1.11932 1.98306 1.80958 1.29075 1.97278 1.20314 0.98780 0.89532 0.89330 1.18309 0.85588 0.98893 0.93712 0.91224 1.20811 1.34531 0.96482 1.01834 0.90283 1.25044 0.94302 0.98167 0.94899 1.69883 1.35028 1.35997 1.11927 0.87052 0.78203 0.86675 0.79012 1.19106 1.21839 1.18226 1.22589 1.01154 0.99282 0.89895 1.22888 0.93027 1.01059 1.05113 1.22928 0.97102 1.03674 0.99825 1.20166 0.90191 0.98565 1.05248 0.88678 0.92887 0.92991 0.85660 0.85743 0.92452 0.88263 0.89591 0.89754 0.90016 0.89704 0.84546 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.31 9.81 101.05 0.99 1.30 16 2 O -0.32 -5.00 10.50 -19.47 -0.20 -5.20 16 3 C 0.13 2.20 6.69 -39.22 -0.26 1.93 16 4 C -0.22 -3.49 9.04 -39.44 -0.36 -3.84 16 5 C -0.07 -1.23 9.82 -39.57 -0.39 -1.62 16 6 C -0.09 -1.66 6.31 -39.49 -0.25 -1.91 16 7 Cl -0.08 -1.65 25.30 -51.86 -1.31 -2.96 16 8 C 0.02 0.46 4.21 -104.61 -0.44 0.02 16 9 C 0.05 1.23 1.98 -92.92 -0.18 1.05 16 10 H 0.07 1.64 2.39 -51.93 -0.12 1.52 16 11 C -0.50 -13.56 8.44 -34.45 -0.29 -13.85 16 12 H 0.08 2.30 8.06 -52.48 -0.42 1.88 16 13 C 0.08 2.25 5.47 -17.82 -0.10 2.15 16 14 N -0.89 -26.86 13.96 55.43 0.77 -26.08 16 15 Si 0.86 21.63 25.69 -169.99 -4.37 17.27 16 16 H -0.27 -6.59 7.11 56.52 0.40 -6.19 16 17 H -0.29 -7.32 7.11 56.52 0.40 -6.91 16 18 H -0.26 -6.13 6.21 56.52 0.35 -5.77 16 19 C -0.11 -2.25 4.86 -90.62 -0.44 -2.69 16 20 C -0.18 -3.35 10.18 -26.69 -0.27 -3.62 16 21 C -0.20 -3.44 9.78 -26.69 -0.26 -3.70 16 22 C -0.12 -2.45 8.87 -39.44 -0.35 -2.80 16 23 H 0.09 0.78 8.14 -51.93 -0.42 0.35 16 24 H 0.05 0.52 7.66 -51.93 -0.40 0.12 16 25 H 0.05 0.48 7.66 -51.93 -0.40 0.08 16 26 H 0.13 1.53 6.30 -52.48 -0.33 1.20 16 27 H 0.12 1.72 8.06 -52.48 -0.42 1.30 16 28 H 0.27 7.55 8.31 -40.82 -0.34 7.21 16 29 H 0.10 2.03 8.07 -51.93 -0.42 1.61 16 30 H 0.09 1.62 8.03 -51.93 -0.42 1.20 16 31 H 0.08 1.37 8.14 -51.93 -0.42 0.95 16 32 H 0.08 1.26 8.14 -51.93 -0.42 0.84 16 33 H 0.08 1.50 8.02 -51.93 -0.42 1.08 16 34 H 0.14 2.77 8.05 -52.48 -0.42 2.35 16 LS Contribution 296.36 15.07 4.47 4.47 Total: -1.00 -29.83 296.36 -7.47 -37.30 By element: Atomic # 1 Polarization: 7.03 SS G_CDS: -4.23 Total: 2.81 kcal Atomic # 6 Polarization: -24.99 SS G_CDS: -2.60 Total: -27.59 kcal Atomic # 7 Polarization: -26.86 SS G_CDS: 0.77 Total: -26.08 kcal Atomic # 8 Polarization: -5.00 SS G_CDS: -0.20 Total: -5.20 kcal Atomic # 14 Polarization: 21.63 SS G_CDS: -4.37 Total: 17.27 kcal Atomic # 17 Polarization: -1.65 SS G_CDS: -1.31 Total: -2.96 kcal Total LS contribution 4.47 Total: 4.47 kcal Total: -29.83 -7.47 -37.30 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260059995.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 37.567 kcal (2) G-P(sol) polarization free energy of solvation -29.827 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.740 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.468 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.295 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.272 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.59 seconds