Wall clock time and date at job start Mon Mar 30 2020 06:58:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.38174 * 119.97711 * 2 1 4 4 C 1.38697 * 119.95569 * 180.02562 * 3 2 1 5 5 O 1.35924 * 120.03923 * 180.02562 * 4 3 2 6 6 C 1.38743 * 119.91972 * 0.02562 * 4 3 2 7 7 C 1.50697 * 120.02573 * 179.97438 * 6 4 3 8 8 H 1.09001 * 109.46794 * 359.97438 * 7 6 4 9 9 C 1.50704 * 109.47276 * 240.00201 * 7 6 4 10 10 H 1.07991 * 120.00009 * 275.51967 * 9 7 6 11 11 C 1.37882 * 119.99942 * 95.51432 * 9 7 6 12 12 N 1.31522 * 119.99633 * 352.01628 * 11 9 7 13 13 Si 1.86792 * 119.99832 * 172.01330 * 11 9 7 14 14 H 1.48497 * 109.47433 * 60.00479 * 13 11 9 15 15 H 1.48505 * 109.47226 * 299.99939 * 13 11 9 16 16 H 1.48503 * 109.47082 * 180.02562 * 13 11 9 17 17 C 1.52991 * 109.47207 * 120.00106 * 7 6 4 18 18 C 1.53004 * 117.49823 * 252.93153 * 17 7 6 19 19 C 1.53005 * 117.50114 * 184.27611 * 17 7 6 20 20 C 1.38119 * 119.95363 * 0.25651 * 6 4 3 21 21 C 1.38347 * 119.98149 * 180.02562 * 2 1 3 22 22 Cl 1.73601 * 119.95685 * 359.97438 * 21 2 1 23 23 H 1.08996 * 109.47203 * 90.00169 * 1 2 3 24 24 H 1.09002 * 109.46513 * 209.99519 * 1 2 3 25 25 H 1.08998 * 109.47403 * 329.99454 * 1 2 3 26 26 H 1.07996 * 120.01512 * 0.03164 * 3 2 1 27 27 H 0.96699 * 113.99708 * 269.97441 * 5 4 3 28 28 H 0.96990 * 120.00242 * 5.26086 * 12 11 9 29 29 H 1.09000 * 115.55418 * 38.60613 * 17 7 6 30 30 H 1.09001 * 117.49930 * 0.02562 * 18 17 7 31 31 H 1.09006 * 117.49626 * 145.01852 * 18 17 7 32 32 H 1.08997 * 117.49999 * 214.98709 * 19 17 7 33 33 H 1.08999 * 117.49555 * 359.97438 * 19 17 7 34 34 H 1.08003 * 119.97988 * 179.72129 * 20 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1974 1.1969 0.0000 4 6 3.5844 1.1964 -0.0005 5 8 4.2652 2.3728 0.0000 6 6 4.2759 -0.0064 -0.0016 7 6 5.7829 -0.0098 -0.0028 8 1 6.1485 1.0171 -0.0031 9 6 6.2828 -0.7207 -1.2340 10 1 6.3756 -1.7966 -1.2360 11 6 6.6215 0.0026 -2.3580 12 7 6.3625 1.2908 -2.4137 13 14 7.4483 -0.8473 -3.8013 14 1 6.5610 -1.9196 -4.3189 15 1 8.7345 -1.4410 -3.3557 16 1 7.7073 0.1434 -4.8768 17 6 6.2923 -0.7327 1.2456 18 6 6.9061 0.1224 2.3561 19 6 7.8039 -0.7560 1.4812 20 6 3.5823 -1.2008 -0.0075 21 6 2.1983 -1.1983 -0.0005 22 17 1.3287 -2.7008 -0.0005 23 1 -0.3633 0.0000 -1.0276 24 1 -0.3632 -0.8901 0.5138 25 1 -0.3634 0.8899 0.5139 26 1 1.6573 2.1321 0.0005 27 1 4.4622 2.7136 -0.8833 28 1 6.0036 1.7474 -1.6368 29 1 5.7228 -1.6127 1.5446 30 1 6.9466 1.2000 2.1973 31 1 6.7406 -0.1952 3.3856 32 1 8.2287 -1.6512 1.9353 33 1 8.4355 -0.2566 0.7465 34 1 4.1202 -2.1373 -0.0129 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260100246.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:58:39 Heat of formation + Delta-G solvation = -22.167169 kcal Electronic energy + Delta-G solvation = -18218.069609 eV Core-core repulsion = 15334.873575 eV Total energy + Delta-G solvation = -2883.196034 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -39.55625 -36.94247 -36.59872 -35.52185 -33.48045 -32.05672 -29.13134 -28.57951 -25.35289 -23.29759 -22.29883 -21.57178 -20.83141 -19.43542 -17.43968 -16.80362 -15.97525 -15.69375 -14.62114 -14.36175 -13.89159 -13.65963 -13.58004 -13.24072 -12.86342 -12.40291 -12.32923 -12.03859 -11.68528 -11.38948 -11.30546 -10.86710 -10.80109 -10.60596 -10.52212 -10.21501 -9.95479 -9.72813 -9.64374 -9.38168 -8.62492 -8.50197 -8.12492 -7.61179 -6.50859 -4.19940 1.66134 1.87780 2.57070 3.38141 3.38961 3.57222 4.05823 4.41583 4.69251 4.84734 5.16912 5.22645 5.30574 5.49576 5.63147 5.76722 5.79148 5.81192 5.93730 6.06974 6.12489 6.23825 6.26426 6.35421 6.54793 6.69040 6.72101 6.80256 6.85337 6.91407 7.20502 7.31547 7.47137 8.04066 8.24655 8.33881 8.74220 9.49088 10.87705 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.015862 B = 0.007557 C = 0.007032 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1764.804949 B = 3704.449131 C = 3980.934565 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.109 4.109 2 C -0.095 4.095 3 C -0.139 4.139 4 C 0.102 3.898 5 O -0.497 6.497 6 C -0.041 4.041 7 C 0.085 3.915 8 H 0.060 0.940 9 C -0.576 4.576 10 H 0.054 0.946 11 C 0.024 3.976 12 N -0.909 5.909 13 Si 1.065 2.935 14 H -0.287 1.287 15 H -0.286 1.286 16 H -0.282 1.282 17 C -0.117 4.117 18 C -0.199 4.199 19 C -0.168 4.168 20 C -0.084 4.084 21 C -0.045 4.045 22 Cl -0.090 7.090 23 H 0.067 0.933 24 H 0.068 0.932 25 H 0.063 0.937 26 H 0.125 0.875 27 H 0.390 0.610 28 H 0.268 0.732 29 H 0.084 0.916 30 H 0.087 0.913 31 H 0.078 0.922 32 H 0.078 0.922 33 H 0.094 0.906 34 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.007 -2.101 4.706 8.698 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.165 4.165 2 C -0.096 4.096 3 C -0.158 4.158 4 C 0.058 3.942 5 O -0.308 6.308 6 C -0.042 4.042 7 C 0.066 3.934 8 H 0.078 0.922 9 C -0.613 4.613 10 H 0.072 0.928 11 C -0.180 4.180 12 N -0.547 5.547 13 Si 0.893 3.107 14 H -0.214 1.214 15 H -0.212 1.212 16 H -0.208 1.208 17 C -0.135 4.135 18 C -0.236 4.236 19 C -0.205 4.205 20 C -0.103 4.103 21 C -0.071 4.071 22 Cl -0.061 7.061 23 H 0.086 0.914 24 H 0.087 0.913 25 H 0.082 0.918 26 H 0.143 0.857 27 H 0.248 0.752 28 H 0.081 0.919 29 H 0.103 0.897 30 H 0.105 0.895 31 H 0.096 0.904 32 H 0.097 0.903 33 H 0.112 0.888 34 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -6.562 -2.029 3.767 7.834 hybrid contribution -0.605 -0.375 0.974 1.206 sum -7.167 -2.404 4.742 8.924 Atomic orbital electron populations 1.20739 0.90982 1.02604 1.02220 1.19300 0.95920 0.91007 1.03416 1.21066 0.93525 0.97179 1.03984 1.18412 0.89229 0.85679 1.00911 1.84709 1.76336 1.35881 1.33904 1.21054 0.99620 0.90542 0.93020 1.17678 0.85472 0.97976 0.92259 0.92187 1.21824 1.46194 0.94881 0.98437 0.92751 1.25843 0.95077 0.96182 1.00944 1.70892 1.42105 1.10039 1.31654 0.83577 0.76385 0.75174 0.75539 1.21368 1.21237 1.20772 1.22343 0.94898 0.99797 0.96469 1.23006 1.07204 0.98000 0.95393 1.22719 0.94501 1.00931 1.02349 1.20702 0.90597 0.99207 0.99772 1.20745 0.92282 0.85555 1.08524 1.98299 1.77125 1.33501 1.97195 0.91386 0.91326 0.91801 0.85705 0.75216 0.91885 0.89749 0.89480 0.90380 0.90330 0.88757 0.85187 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.44 9.61 36.01 0.35 -1.10 16 2 C -0.10 -1.63 5.88 -104.61 -0.62 -2.25 16 3 C -0.14 -2.49 9.64 -39.44 -0.38 -2.87 16 4 C 0.10 2.11 6.68 -39.23 -0.26 1.85 16 5 O -0.50 -10.03 11.88 -19.50 -0.23 -10.26 16 6 C -0.04 -0.90 4.78 -104.48 -0.50 -1.40 16 7 C 0.08 1.98 1.88 -92.93 -0.17 1.81 16 8 H 0.06 1.52 5.17 -51.93 -0.27 1.25 16 9 C -0.58 -14.82 7.67 -34.44 -0.26 -15.08 16 10 H 0.05 1.42 7.83 -52.49 -0.41 1.01 16 11 C 0.02 0.63 5.44 -17.81 -0.10 0.54 16 12 N -0.91 -24.98 13.62 55.43 0.76 -24.22 16 13 Si 1.07 24.01 29.91 -169.99 -5.08 18.92 16 14 H -0.29 -6.30 7.11 56.52 0.40 -5.90 16 15 H -0.29 -6.19 7.11 56.52 0.40 -5.79 16 16 H -0.28 -6.43 7.11 56.52 0.40 -6.03 16 17 C -0.12 -2.42 4.95 -90.62 -0.45 -2.87 16 18 C -0.20 -3.69 10.18 -26.69 -0.27 -3.96 16 19 C -0.17 -3.22 9.99 -26.69 -0.27 -3.49 16 20 C -0.08 -1.72 8.43 -39.57 -0.33 -2.05 16 21 C -0.04 -0.82 6.31 -39.48 -0.25 -1.07 16 22 Cl -0.09 -1.42 27.29 -51.86 -1.41 -2.84 16 23 H 0.07 0.85 8.14 -51.93 -0.42 0.42 16 24 H 0.07 0.87 6.90 -51.93 -0.36 0.51 16 25 H 0.06 0.74 8.08 -51.93 -0.42 0.32 16 26 H 0.13 1.93 8.06 -52.49 -0.42 1.51 16 27 H 0.39 7.32 7.67 45.56 0.35 7.67 16 28 H 0.27 7.06 4.72 -40.82 -0.19 6.87 16 29 H 0.08 1.69 7.43 -51.93 -0.39 1.31 16 30 H 0.09 1.66 8.08 -51.93 -0.42 1.24 16 31 H 0.08 1.28 8.14 -51.93 -0.42 0.85 16 32 H 0.08 1.33 8.14 -51.93 -0.42 0.91 16 33 H 0.09 1.95 8.14 -51.93 -0.42 1.53 16 34 H 0.13 2.65 7.82 -52.48 -0.41 2.24 16 LS Contribution 299.79 15.07 4.52 4.52 Total: -1.00 -27.50 299.79 -8.40 -35.90 By element: Atomic # 1 Polarization: 13.34 SS G_CDS: -3.43 Total: 9.92 kcal Atomic # 6 Polarization: -28.42 SS G_CDS: -3.52 Total: -31.94 kcal Atomic # 7 Polarization: -24.98 SS G_CDS: 0.76 Total: -24.22 kcal Atomic # 8 Polarization: -10.03 SS G_CDS: -0.23 Total: -10.26 kcal Atomic # 14 Polarization: 24.01 SS G_CDS: -5.08 Total: 18.92 kcal Atomic # 17 Polarization: -1.42 SS G_CDS: -1.41 Total: -2.84 kcal Total LS contribution 4.52 Total: 4.52 kcal Total: -27.50 -8.40 -35.90 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260100246.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.731 kcal (2) G-P(sol) polarization free energy of solvation -27.498 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.767 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.400 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.898 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.167 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds