Wall clock time and date at job start Mon Mar 30 2020 07:04:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38191 * 120.01991 * 2 1 4 4 C 1.38232 * 120.07953 * 179.97438 * 3 2 1 5 5 C 1.38293 * 120.11346 * 0.03024 * 4 3 2 6 6 C 1.50707 * 119.97387 * 180.02562 * 5 4 3 7 7 H 1.09002 * 109.46873 * 179.97438 * 6 5 4 8 8 C 1.50698 * 109.47086 * 299.99872 * 6 5 4 9 9 H 1.07999 * 120.00184 * 359.97438 * 8 6 5 10 10 C 1.37877 * 119.99998 * 180.02562 * 8 6 5 11 11 N 1.31518 * 119.99887 * 359.97438 * 10 8 6 12 12 Si 1.86800 * 120.00420 * 179.97438 * 10 8 6 13 13 H 1.48505 * 109.46836 * 59.99768 * 12 10 8 14 14 H 1.48497 * 109.47401 * 179.97438 * 12 10 8 15 15 H 1.48499 * 109.46773 * 299.99876 * 12 10 8 16 16 C 1.52998 * 109.47224 * 59.99977 * 6 5 4 17 17 C 1.52999 * 117.50348 * 128.74547 * 16 6 5 18 18 C 1.53003 * 117.50102 * 60.08138 * 16 6 5 19 19 C 1.38208 * 120.04523 * 359.71683 * 5 4 3 20 20 Cl 1.73599 * 120.03945 * 180.29668 * 19 5 4 21 21 C 1.38665 * 120.01983 * 180.02562 * 2 1 3 22 22 O 1.35919 * 120.06170 * 359.97438 * 21 2 1 23 23 H 1.09001 * 109.47481 * 269.97275 * 1 2 3 24 24 H 1.08998 * 109.47153 * 29.97829 * 1 2 3 25 25 H 1.09007 * 109.47083 * 149.97602 * 1 2 3 26 26 H 1.07999 * 119.96269 * 0.02562 * 3 2 1 27 27 H 1.07995 * 119.94165 * 180.02562 * 4 3 2 28 28 H 0.97001 * 120.00066 * 179.97438 * 11 10 8 29 29 H 1.09003 * 115.54686 * 274.41654 * 16 6 5 30 30 H 1.09005 * 117.49299 * 359.97438 * 17 16 6 31 31 H 1.08994 * 117.50172 * 145.01537 * 17 16 6 32 32 H 1.09000 * 117.50232 * 214.97837 * 18 16 6 33 33 H 1.08998 * 117.49523 * 0.02562 * 18 16 6 34 34 H 0.96700 * 114.00199 * 90.00156 * 22 21 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1984 1.1965 0.0000 4 6 3.5807 1.1980 0.0005 5 6 4.2758 0.0024 0.0004 6 6 5.7828 0.0076 0.0016 7 1 6.1497 -1.0188 0.0018 8 6 6.2836 0.7204 -1.2281 9 1 5.5810 1.1284 -1.9396 10 6 7.6389 0.8507 -1.4454 11 7 8.4946 0.3535 -0.5793 12 14 8.2598 1.7336 -2.9700 13 1 7.7603 3.1321 -2.9700 14 1 9.7448 1.7389 -2.9688 15 1 7.7678 1.0322 -4.1830 16 6 6.2894 0.7300 1.2516 17 6 7.3275 0.0080 2.1129 18 6 5.8877 0.1551 2.6114 19 6 3.5893 -1.1971 0.0057 20 17 4.4620 -2.6978 0.0134 21 6 2.2008 -1.2006 -0.0005 22 8 1.5228 -2.3787 -0.0005 23 1 -0.3634 -0.0005 1.0277 24 1 -0.3633 0.8902 -0.5135 25 1 -0.3634 -0.8898 -0.5142 26 1 1.6581 2.1317 0.0004 27 1 4.1188 2.1343 0.0010 28 1 9.4481 0.4448 -0.7324 29 1 6.3710 1.8137 1.1676 30 1 7.6493 -0.9819 1.7892 31 1 8.0919 0.6167 2.5959 32 1 5.7055 0.8604 3.4222 33 1 5.2629 -0.7380 2.6154 34 1 1.3263 -2.7194 -0.8839 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260247817.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:04:37 Heat of formation + Delta-G solvation = -13.353752 kcal Electronic energy + Delta-G solvation = -18194.705886 eV Core-core repulsion = 15311.892031 eV Total energy + Delta-G solvation = -2882.813855 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -39.61820 -37.19751 -35.83432 -35.74034 -32.91296 -32.09542 -29.29575 -28.79988 -25.55189 -23.07403 -22.24460 -21.23157 -20.83569 -19.23354 -17.48037 -16.48900 -15.73235 -15.48421 -14.98871 -14.54669 -14.09193 -13.67588 -13.17402 -13.05154 -12.73515 -12.40756 -12.20979 -12.00236 -11.40767 -11.30108 -10.94964 -10.90893 -10.64455 -10.56204 -10.44909 -10.26530 -9.91313 -9.81754 -9.61385 -8.76468 -8.70885 -8.28717 -8.07510 -7.77789 -6.00529 -4.07967 1.62654 1.77880 2.81387 3.30182 3.35417 3.37830 4.04190 4.42940 4.48652 5.06693 5.16804 5.29562 5.30315 5.58152 5.74095 5.81489 5.92067 5.94632 6.03330 6.16540 6.21793 6.36670 6.51046 6.55878 6.76133 6.85867 6.91840 7.02009 7.17096 7.26493 7.32669 7.49821 7.78057 7.87988 7.97168 8.30781 8.93064 9.55560 11.05187 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.019696 B = 0.007308 C = 0.006808 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1421.271676 B = 3830.386401 C = 4112.019142 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.098 4.098 2 C -0.131 4.131 3 C -0.109 4.109 4 C -0.101 4.101 5 C -0.007 4.007 6 C 0.096 3.904 7 H 0.056 0.944 8 C -0.517 4.517 9 H 0.057 0.943 10 C 0.070 3.930 11 N -0.871 5.871 12 Si 0.889 3.111 13 H -0.278 1.278 14 H -0.288 1.288 15 H -0.278 1.278 16 C -0.081 4.081 17 C -0.134 4.134 18 C -0.227 4.227 19 C -0.066 4.066 20 Cl -0.065 7.065 21 C 0.103 3.897 22 O -0.489 6.489 23 H 0.065 0.935 24 H 0.061 0.939 25 H 0.062 0.938 26 H 0.121 0.879 27 H 0.133 0.867 28 H 0.260 0.740 29 H 0.083 0.917 30 H 0.086 0.914 31 H 0.070 0.930 32 H 0.071 0.929 33 H 0.077 0.923 34 H 0.382 0.618 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.103 -0.959 1.452 11.238 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.132 4.132 3 C -0.127 4.127 4 C -0.120 4.120 5 C -0.008 4.008 6 C 0.078 3.922 7 H 0.074 0.926 8 C -0.555 4.555 9 H 0.075 0.925 10 C -0.134 4.134 11 N -0.508 5.508 12 Si 0.716 3.284 13 H -0.203 1.203 14 H -0.213 1.213 15 H -0.203 1.203 16 C -0.100 4.100 17 C -0.171 4.171 18 C -0.264 4.264 19 C -0.093 4.093 20 Cl -0.036 7.036 21 C 0.057 3.943 22 O -0.298 6.298 23 H 0.084 0.916 24 H 0.080 0.920 25 H 0.081 0.919 26 H 0.139 0.861 27 H 0.151 0.849 28 H 0.070 0.930 29 H 0.101 0.899 30 H 0.104 0.896 31 H 0.089 0.911 32 H 0.089 0.911 33 H 0.095 0.905 34 H 0.237 0.763 Dipole moment (debyes) X Y Z Total from point charges -10.783 -1.072 2.108 11.039 hybrid contribution 0.577 0.328 -1.328 1.484 sum -10.206 -0.745 0.780 10.263 Atomic orbital electron populations 1.20531 0.90965 1.01986 1.01953 1.19869 0.96114 0.92035 1.05161 1.20964 0.94420 0.96699 1.00626 1.21062 0.92916 0.98509 0.99478 1.20406 0.99366 0.89717 0.91342 1.17724 0.83123 0.98450 0.92896 0.92633 1.20897 0.91533 1.37320 1.05701 0.92516 1.24923 0.96895 0.95401 0.96133 1.70018 1.01917 1.44174 1.34681 0.86721 0.77628 0.80258 0.83755 1.20324 1.21341 1.20343 1.22160 1.00765 0.97950 0.89150 1.22430 0.89836 1.02002 1.02824 1.23078 1.00366 1.03123 0.99834 1.21308 0.90798 0.88195 1.09013 1.98320 1.76381 1.31913 1.96939 1.17914 0.87795 0.85264 1.03281 1.84825 1.76181 1.35961 1.32866 0.91641 0.92001 0.91930 0.86067 0.84929 0.93015 0.89923 0.89580 0.91143 0.91063 0.90490 0.76321 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -1.14 9.79 36.01 0.35 -0.79 16 2 C -0.13 -2.02 5.89 -104.48 -0.62 -2.64 16 3 C -0.11 -1.72 9.70 -39.60 -0.38 -2.10 16 4 C -0.10 -1.90 8.82 -39.56 -0.35 -2.25 16 5 C -0.01 -0.16 4.39 -104.61 -0.46 -0.62 16 6 C 0.10 2.29 2.00 -92.92 -0.19 2.10 16 7 H 0.06 1.44 5.92 -51.93 -0.31 1.13 16 8 C -0.52 -13.44 8.22 -34.44 -0.28 -13.73 16 9 H 0.06 1.47 7.60 -52.49 -0.40 1.07 16 10 C 0.07 1.85 5.30 -17.82 -0.09 1.76 16 11 N -0.87 -23.63 11.43 55.43 0.63 -23.00 16 12 Si 0.89 20.65 29.54 -169.99 -5.02 15.63 16 13 H -0.28 -6.38 7.11 56.52 0.40 -5.98 16 14 H -0.29 -6.69 7.11 56.52 0.40 -6.29 16 15 H -0.28 -6.48 7.11 56.52 0.40 -6.08 16 16 C -0.08 -1.85 3.87 -90.62 -0.35 -2.20 16 17 C -0.13 -2.94 9.04 -26.69 -0.24 -3.18 16 18 C -0.23 -4.59 9.87 -26.69 -0.26 -4.85 16 19 C -0.07 -1.30 6.33 -39.36 -0.25 -1.54 16 20 Cl -0.06 -1.25 26.55 -51.86 -1.38 -2.63 16 21 C 0.10 1.75 6.67 -39.19 -0.26 1.49 16 22 O -0.49 -7.22 12.01 -19.48 -0.23 -7.46 16 23 H 0.06 0.74 8.14 -51.93 -0.42 0.31 16 24 H 0.06 0.62 8.09 -51.93 -0.42 0.20 16 25 H 0.06 0.67 7.53 -51.92 -0.39 0.28 16 26 H 0.12 1.55 8.06 -52.49 -0.42 1.13 16 27 H 0.13 2.46 8.05 -52.49 -0.42 2.03 16 28 H 0.26 6.84 8.31 -40.82 -0.34 6.50 16 29 H 0.08 1.95 8.11 -51.93 -0.42 1.53 16 30 H 0.09 2.02 8.05 -51.93 -0.42 1.60 16 31 H 0.07 1.49 8.14 -51.93 -0.42 1.06 16 32 H 0.07 1.31 8.14 -51.93 -0.42 0.89 16 33 H 0.08 1.58 8.14 -51.93 -0.42 1.16 16 34 H 0.38 4.00 9.06 45.56 0.41 4.41 16 LS Contribution 302.08 15.07 4.55 4.55 Total: -1.00 -28.04 302.08 -8.44 -36.48 By element: Atomic # 1 Polarization: 8.58 SS G_CDS: -3.61 Total: 4.97 kcal Atomic # 6 Polarization: -25.17 SS G_CDS: -3.38 Total: -28.55 kcal Atomic # 7 Polarization: -23.63 SS G_CDS: 0.63 Total: -23.00 kcal Atomic # 8 Polarization: -7.22 SS G_CDS: -0.23 Total: -7.46 kcal Atomic # 14 Polarization: 20.65 SS G_CDS: -5.02 Total: 15.63 kcal Atomic # 17 Polarization: -1.25 SS G_CDS: -1.38 Total: -2.63 kcal Total LS contribution 4.55 Total: 4.55 kcal Total: -28.04 -8.44 -36.48 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260247817.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.130 kcal (2) G-P(sol) polarization free energy of solvation -28.039 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.909 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.444 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.483 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.354 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds