Wall clock time and date at job start Mon Mar 30 2020 06:52:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 C 1.38389 * 119.98025 * 2 1 4 4 Cl 1.73599 * 119.95696 * 0.02562 * 3 2 1 5 5 C 1.38338 * 120.08307 * 180.25275 * 3 2 1 6 6 C 1.38164 * 120.04492 * 359.78563 * 5 3 2 7 7 C 1.38697 * 119.95637 * 359.97438 * 6 5 3 8 8 O 1.35926 * 120.04082 * 180.02562 * 7 6 5 9 9 C 1.38122 * 119.97790 * 179.78560 * 2 1 3 10 10 C 1.50705 * 120.02012 * 0.02562 * 9 2 1 11 11 H 1.09002 * 109.47131 * 354.02753 * 10 9 2 12 12 C 1.50702 * 109.46815 * 114.02663 * 10 9 2 13 13 H 1.07996 * 120.00459 * 359.97438 * 12 10 9 14 14 C 1.37876 * 119.99844 * 180.02562 * 12 10 9 15 15 N 1.31518 * 120.00128 * 359.97438 * 14 12 10 16 16 Si 1.86803 * 120.00216 * 179.97438 * 14 12 10 17 17 H 1.48499 * 109.46839 * 0.02562 * 16 14 12 18 18 H 1.48506 * 109.46801 * 119.99745 * 16 14 12 19 19 H 1.48499 * 109.47401 * 240.00199 * 16 14 12 20 20 C 1.53003 * 109.47122 * 234.02436 * 10 9 2 21 21 C 1.52998 * 117.49675 * 128.62439 * 20 10 9 22 22 C 1.53001 * 117.49699 * 60.00132 * 20 10 9 23 23 H 1.08993 * 109.47315 * 264.94532 * 1 2 3 24 24 H 1.08997 * 109.46640 * 24.94887 * 1 2 3 25 25 H 1.09007 * 109.46699 * 144.94218 * 1 2 3 26 26 H 1.08000 * 119.97854 * 179.76845 * 5 3 2 27 27 H 1.07997 * 120.02106 * 179.97438 * 6 5 3 28 28 H 0.96699 * 114.00409 * 269.97533 * 8 7 6 29 29 H 0.97001 * 120.00235 * 180.02562 * 15 14 12 30 30 H 1.08998 * 115.54495 * 274.33150 * 20 10 9 31 31 H 1.08996 * 117.50130 * 0.02562 * 21 20 10 32 32 H 1.09004 * 117.49481 * 145.02324 * 21 20 10 33 33 H 1.08998 * 117.49412 * 214.97904 * 22 20 10 34 34 H 1.08994 * 117.49753 * 359.97438 * 22 20 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1986 1.1987 0.0000 4 17 1.3290 2.7012 0.0007 5 6 3.5820 1.2012 -0.0053 6 6 4.2759 0.0065 -0.0061 7 6 3.5846 -1.1960 -0.0011 8 8 4.2655 -2.3723 -0.0013 9 6 2.1972 -1.1964 0.0045 10 6 1.4437 -2.5015 0.0088 11 1 0.3768 -2.3047 0.1146 12 6 1.6940 -3.2303 -1.2863 13 1 2.3343 -2.7922 -2.0375 14 6 1.1047 -4.4561 -1.5126 15 7 0.3245 -4.9896 -0.5980 16 14 1.4144 -5.3593 -3.1182 17 1 2.3220 -4.5524 -3.9729 18 1 2.0428 -6.6743 -2.8331 19 1 0.1252 -5.5694 -3.8247 20 6 1.9220 -3.3628 1.1794 21 6 0.8566 -3.9388 2.1143 22 6 1.7538 -2.7942 2.5898 23 1 -0.3633 -0.0905 1.0236 24 1 -0.3632 0.9318 -0.4335 25 1 -0.3633 -0.8413 -0.5903 26 1 4.1199 2.1377 -0.0091 27 1 5.3558 0.0089 -0.0106 28 1 4.4589 -2.7147 -0.8848 29 1 -0.0898 -5.8521 -0.7571 30 1 2.8041 -3.9728 0.9845 31 1 -0.1851 -3.7045 1.8952 32 1 1.0377 -4.9280 2.5347 33 1 2.5250 -3.0305 3.3229 34 1 1.3027 -1.8064 2.6837 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260320088.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:52:39 Heat of formation + Delta-G solvation = -10.871809 kcal Electronic energy + Delta-G solvation = -18530.536275 eV Core-core repulsion = 15647.830045 eV Total energy + Delta-G solvation = -2882.706230 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -39.63225 -36.76065 -36.24251 -35.48703 -32.90927 -32.13402 -29.94300 -27.31833 -26.25974 -23.54425 -21.58127 -21.20689 -20.63697 -19.00841 -17.40533 -16.54123 -15.92911 -15.50043 -14.60168 -14.48969 -14.13139 -13.49310 -13.18405 -12.87643 -12.59060 -12.44514 -12.06059 -11.93381 -11.64164 -11.16015 -11.02143 -10.85640 -10.62296 -10.59149 -10.43307 -10.22612 -9.83583 -9.76327 -9.63000 -8.74387 -8.69542 -8.28434 -8.03780 -7.75154 -6.04753 -4.12791 1.61925 1.83295 2.52388 3.24403 3.33856 3.35184 4.03572 4.38282 4.91450 5.14119 5.22435 5.28149 5.33388 5.74724 5.83273 6.00515 6.02538 6.12013 6.17048 6.25587 6.40279 6.55824 6.58570 6.63550 6.67402 6.88880 6.93820 7.01824 7.22454 7.28000 7.33353 7.56591 7.73905 7.95097 8.27429 8.41120 8.86873 9.50925 11.00577 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.020009 B = 0.007147 C = 0.006931 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1399.029411 B = 3916.691218 C = 4038.681677 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.071 4.071 3 C -0.048 4.048 4 Cl -0.089 7.089 5 C -0.119 4.119 6 C -0.151 4.151 7 C 0.127 3.873 8 O -0.484 6.484 9 C -0.043 4.043 10 C 0.107 3.893 11 H 0.045 0.955 12 C -0.514 4.514 13 H 0.053 0.947 14 C 0.071 3.929 15 N -0.869 5.869 16 Si 0.887 3.113 17 H -0.274 1.274 18 H -0.285 1.285 19 H -0.285 1.285 20 C -0.067 4.067 21 C -0.143 4.143 22 C -0.227 4.227 23 H 0.067 0.933 24 H 0.063 0.937 25 H 0.085 0.915 26 H 0.124 0.876 27 H 0.126 0.874 28 H 0.388 0.612 29 H 0.259 0.741 30 H 0.091 0.909 31 H 0.083 0.917 32 H 0.068 0.932 33 H 0.069 0.931 34 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.550 8.627 1.387 9.431 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.072 4.072 3 C -0.074 4.074 4 Cl -0.061 7.061 5 C -0.138 4.138 6 C -0.170 4.170 7 C 0.082 3.918 8 O -0.294 6.294 9 C -0.044 4.044 10 C 0.089 3.911 11 H 0.063 0.937 12 C -0.552 4.552 13 H 0.071 0.929 14 C -0.133 4.133 15 N -0.506 5.506 16 Si 0.715 3.285 17 H -0.199 1.199 18 H -0.211 1.211 19 H -0.211 1.211 20 C -0.085 4.085 21 C -0.180 4.180 22 C -0.264 4.264 23 H 0.086 0.914 24 H 0.082 0.918 25 H 0.104 0.896 26 H 0.142 0.858 27 H 0.143 0.857 28 H 0.245 0.755 29 H 0.069 0.931 30 H 0.109 0.891 31 H 0.102 0.898 32 H 0.087 0.913 33 H 0.088 0.912 34 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges 3.322 8.647 2.034 9.484 hybrid contribution 0.200 -0.526 -1.323 1.438 sum 3.523 8.121 0.711 8.881 Atomic orbital electron populations 1.20885 0.90713 1.03271 1.02563 1.19558 0.96713 0.90444 1.00473 1.20707 0.92033 0.85825 1.08875 1.98302 1.77345 1.33204 1.97221 1.20583 0.91692 0.98131 1.03365 1.21253 0.99915 0.91643 1.04199 1.18304 0.89694 0.85136 0.98660 1.84742 1.75499 1.35864 1.33283 1.20785 0.93239 0.96322 0.94050 1.17559 0.94359 0.85449 0.93729 0.93706 1.20829 1.30464 1.03616 1.00285 0.92906 1.24913 0.94948 0.97190 0.96211 1.70028 1.30245 1.17382 1.32938 0.86626 0.78044 0.79821 0.84004 1.19907 1.21074 1.21123 1.22127 0.98849 0.99827 0.87744 1.22458 0.96670 0.94894 1.03947 1.23013 1.04282 0.97983 1.01157 0.91425 0.91806 0.89604 0.85799 0.85652 0.75484 0.93090 0.89072 0.89830 0.91300 0.91227 0.90915 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -2.05 8.84 36.01 0.32 -1.73 16 2 C -0.07 -1.33 5.88 -104.61 -0.62 -1.95 16 3 C -0.05 -0.81 6.31 -39.49 -0.25 -1.06 16 4 Cl -0.09 -1.31 27.20 -51.86 -1.41 -2.73 16 5 C -0.12 -1.86 9.82 -39.57 -0.39 -2.24 16 6 C -0.15 -2.46 9.99 -39.44 -0.39 -2.85 16 7 C 0.13 2.40 6.31 -39.23 -0.25 2.16 16 8 O -0.48 -9.01 10.78 -19.51 -0.21 -9.22 16 9 C -0.04 -0.88 4.39 -104.48 -0.46 -1.34 16 10 C 0.11 2.46 1.73 -92.92 -0.16 2.30 16 11 H 0.05 1.11 5.47 -51.93 -0.28 0.82 16 12 C -0.51 -12.74 7.66 -34.44 -0.26 -13.01 16 13 H 0.05 1.30 7.73 -52.49 -0.41 0.89 16 14 C 0.07 1.81 5.30 -17.82 -0.09 1.72 16 15 N -0.87 -22.94 11.44 55.43 0.63 -22.31 16 16 Si 0.89 19.98 29.54 -169.99 -5.02 14.96 16 17 H -0.27 -6.10 7.11 56.52 0.40 -5.69 16 18 H -0.28 -6.46 7.11 56.52 0.40 -6.06 16 19 H -0.29 -6.52 7.11 56.52 0.40 -6.11 16 20 C -0.07 -1.52 3.12 -90.62 -0.28 -1.80 16 21 C -0.14 -3.12 9.05 -26.73 -0.24 -3.36 16 22 C -0.23 -4.66 9.87 -26.73 -0.26 -4.92 16 23 H 0.07 1.12 8.14 -51.93 -0.42 0.70 16 24 H 0.06 0.99 6.69 -51.93 -0.35 0.65 16 25 H 0.09 1.63 6.52 -51.93 -0.34 1.29 16 26 H 0.12 1.61 8.06 -52.49 -0.42 1.19 16 27 H 0.13 1.72 8.06 -52.49 -0.42 1.30 16 28 H 0.39 6.20 8.92 45.56 0.41 6.60 16 29 H 0.26 6.63 8.31 -40.82 -0.34 6.29 16 30 H 0.09 2.23 7.24 -51.93 -0.38 1.85 16 31 H 0.08 1.90 8.05 -51.93 -0.42 1.49 16 32 H 0.07 1.47 8.14 -51.93 -0.42 1.05 16 33 H 0.07 1.35 8.14 -51.93 -0.42 0.92 16 34 H 0.07 1.47 8.14 -51.93 -0.42 1.04 16 LS Contribution 296.14 15.07 4.46 4.46 Total: -1.00 -26.38 296.14 -8.32 -34.70 By element: Atomic # 1 Polarization: 11.65 SS G_CDS: -3.44 Total: 8.22 kcal Atomic # 6 Polarization: -24.75 SS G_CDS: -3.34 Total: -28.09 kcal Atomic # 7 Polarization: -22.94 SS G_CDS: 0.63 Total: -22.31 kcal Atomic # 8 Polarization: -9.01 SS G_CDS: -0.21 Total: -9.22 kcal Atomic # 14 Polarization: 19.98 SS G_CDS: -5.02 Total: 14.96 kcal Atomic # 17 Polarization: -1.31 SS G_CDS: -1.41 Total: -2.73 kcal Total LS contribution 4.46 Total: 4.46 kcal Total: -26.38 -8.32 -34.70 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260320088.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.827 kcal (2) G-P(sol) polarization free energy of solvation -26.378 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.551 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.321 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.699 kcal (6) G-S(sol) free energy of system = (1) + (5) -10.872 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds