Wall clock time and date at job start Mon Mar 30 2020 07:01:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35932 * 116.99892 * 2 1 4 4 C 1.38851 * 120.05850 * 85.99167 * 3 2 1 5 5 Cl 1.73600 * 120.03754 * 359.97438 * 4 3 2 6 6 C 1.38217 * 119.92499 * 179.70127 * 4 3 2 7 7 C 1.50700 * 119.98126 * 180.27570 * 6 4 3 8 8 C 1.38289 * 120.03918 * 0.25777 * 6 4 3 9 9 C 1.38239 * 120.11830 * 0.03993 * 8 6 4 10 10 C 1.38194 * 120.07835 * 359.95749 * 9 8 6 11 11 C 1.50697 * 120.01796 * 180.02562 * 10 9 8 12 12 C 1.50706 * 115.54862 * 117.22583 * 11 10 9 13 13 H 1.07999 * 119.99785 * 145.95351 * 12 11 10 14 14 C 1.37880 * 119.99541 * 325.95349 * 12 11 10 15 15 N 1.31507 * 120.00345 * 0.68984 * 14 12 11 16 16 Si 1.86804 * 119.99686 * 180.68328 * 14 12 11 17 17 H 1.48506 * 109.46856 * 55.00427 * 16 14 12 18 18 H 1.48494 * 109.46993 * 175.00408 * 16 14 12 19 19 H 1.48501 * 109.46983 * 295.00461 * 16 14 12 20 20 C 1.53001 * 117.50248 * 331.55145 * 11 10 9 21 21 C 1.53004 * 117.49966 * 262.89147 * 11 10 9 22 22 H 1.09003 * 109.46558 * 185.26844 * 1 2 3 23 23 H 1.08998 * 109.46896 * 305.27122 * 1 2 3 24 24 H 1.09001 * 109.47028 * 65.27290 * 1 2 3 25 25 H 1.08999 * 109.46683 * 90.00131 * 7 6 4 26 26 H 1.09001 * 109.46846 * 210.00232 * 7 6 4 27 27 H 1.09003 * 109.46743 * 330.00070 * 7 6 4 28 28 H 1.08000 * 119.94070 * 180.02562 * 8 6 4 29 29 H 1.08001 * 119.95909 * 179.97438 * 9 8 6 30 30 H 0.97001 * 120.00162 * 185.00718 * 15 14 12 31 31 H 1.09000 * 117.49913 * 0.02562 * 20 11 10 32 32 H 1.08999 * 117.49339 * 145.02116 * 20 11 10 33 33 H 1.09003 * 117.49492 * 214.98522 * 21 11 10 34 34 H 1.08998 * 117.49705 * 359.97438 * 21 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2112 0.0000 4 6 2.2870 1.8690 1.1988 5 17 1.7998 1.1459 2.7000 6 6 2.9202 3.0976 1.1961 7 6 3.1879 3.8098 2.4969 8 6 3.3087 3.6735 0.0003 9 6 3.0642 3.0229 -1.1947 10 6 2.4315 1.7943 -1.1976 11 6 2.1661 1.0861 -2.5010 12 6 2.8584 -0.2416 -2.6719 13 1 2.3737 -1.0369 -3.2187 14 6 4.1105 -0.4410 -2.1301 15 7 4.6949 0.5228 -1.4526 16 14 4.9767 -2.0803 -2.3582 17 1 5.0592 -2.3992 -3.8063 18 1 6.3463 -1.9996 -1.7902 19 1 4.2130 -3.1451 -1.6595 20 6 1.9779 1.9505 -3.7493 21 6 0.7756 1.2425 -3.1198 22 1 -0.3632 -1.0234 0.0944 23 1 -0.3633 0.5934 0.8390 24 1 -0.3633 0.4299 -0.9334 25 1 4.1638 3.5119 2.8800 26 1 3.1761 4.8870 2.3304 27 1 2.4171 3.5456 3.2210 28 1 3.8037 4.6334 0.0000 29 1 3.3683 3.4752 -2.1271 30 1 5.6040 0.4093 -1.1337 31 1 2.0464 3.0316 -3.6279 32 1 2.3545 1.5587 -4.6941 33 1 0.3617 0.3853 -3.6507 34 1 0.0525 1.8574 -2.5838 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260362610.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:01:42 Heat of formation + Delta-G solvation = 5.651057 kcal Electronic energy + Delta-G solvation = -18805.556194 eV Core-core repulsion = 15923.566449 eV Total energy + Delta-G solvation = -2881.989745 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -39.38628 -36.60299 -36.44073 -35.44518 -32.10028 -31.34846 -29.29358 -26.57961 -26.03017 -25.37800 -22.12299 -21.28707 -20.76245 -19.19450 -17.02190 -16.30979 -15.51017 -14.84490 -14.77210 -14.45987 -13.81918 -13.49675 -13.33461 -13.22335 -12.95659 -12.04268 -11.88849 -11.70904 -11.48210 -11.13443 -11.01416 -10.91569 -10.78045 -10.57723 -10.37350 -10.31484 -10.16640 -9.65972 -9.08212 -8.96287 -8.87977 -8.32525 -7.70536 -7.41185 -5.92394 -4.03041 2.03593 2.20120 2.85732 3.34139 3.39275 3.41805 4.35319 4.44444 4.70864 4.99546 5.41887 5.54433 5.58174 5.84187 5.87310 5.89855 5.99360 6.00645 6.12249 6.16404 6.25840 6.30348 6.39609 6.56661 6.60782 6.65838 6.82979 6.92084 7.09563 7.20684 7.36967 7.58923 7.62531 7.87686 8.33839 8.49053 8.90381 9.55899 11.04191 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.017630 B = 0.009109 C = 0.008618 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1587.800695 B = 3073.018973 C = 3248.405467 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.038 3.962 2 O -0.303 6.303 3 C 0.124 3.876 4 C -0.059 4.059 5 Cl -0.090 7.090 6 C -0.103 4.103 7 C -0.105 4.105 8 C -0.120 4.120 9 C -0.083 4.083 10 C 0.045 3.955 11 C 0.089 3.911 12 C -0.478 4.478 13 H 0.061 0.939 14 C 0.077 3.923 15 N -0.869 5.869 16 Si 0.894 3.106 17 H -0.278 1.278 18 H -0.288 1.288 19 H -0.276 1.276 20 C -0.207 4.207 21 C -0.203 4.203 22 H 0.082 0.918 23 H 0.032 0.968 24 H 0.045 0.955 25 H 0.064 0.936 26 H 0.060 0.940 27 H 0.063 0.937 28 H 0.115 0.885 29 H 0.117 0.883 30 H 0.262 0.738 31 H 0.068 0.932 32 H 0.081 0.919 33 H 0.080 0.920 34 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.182 5.348 4.554 8.729 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.219 6.219 3 C 0.079 3.921 4 C -0.086 4.086 5 Cl -0.062 7.062 6 C -0.104 4.104 7 C -0.162 4.162 8 C -0.138 4.138 9 C -0.102 4.102 10 C 0.044 3.956 11 C 0.088 3.912 12 C -0.515 4.515 13 H 0.079 0.921 14 C -0.127 4.127 15 N -0.504 5.504 16 Si 0.722 3.278 17 H -0.204 1.204 18 H -0.213 1.213 19 H -0.201 1.201 20 C -0.245 4.245 21 C -0.241 4.241 22 H 0.100 0.900 23 H 0.051 0.949 24 H 0.063 0.937 25 H 0.083 0.917 26 H 0.079 0.921 27 H 0.082 0.918 28 H 0.133 0.867 29 H 0.135 0.865 30 H 0.073 0.927 31 H 0.087 0.913 32 H 0.100 0.900 33 H 0.098 0.902 34 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges -4.974 5.112 4.864 8.633 hybrid contribution 0.542 -0.795 -0.025 0.963 sum -4.432 4.317 4.839 7.854 Atomic orbital electron populations 1.22859 0.81150 1.01986 0.99738 1.86167 1.17805 1.24012 1.93899 1.17989 0.98288 0.85973 0.89814 1.21100 1.06522 0.95322 0.85618 1.98272 1.90717 1.83606 1.33570 1.19250 1.01521 0.93845 0.95809 1.20688 1.01895 0.99184 0.94453 1.20682 1.01639 0.99988 0.91534 1.20750 0.97210 0.94955 0.97254 1.19283 0.92235 0.90760 0.93347 1.17657 0.92558 0.94909 0.86040 1.20312 1.01295 0.95499 1.34395 0.92068 1.24903 0.97575 0.96591 0.93657 1.69870 1.13184 1.32223 1.35161 0.86622 0.78620 0.84433 0.78154 1.20361 1.21345 1.20107 1.23137 1.03785 0.96888 1.00729 1.22930 0.92026 1.02485 1.06620 0.89958 0.94945 0.93678 0.91710 0.92087 0.91802 0.86690 0.86496 0.92736 0.91343 0.90011 0.90193 0.91523 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.68 11.10 101.05 1.12 1.80 16 2 O -0.30 -6.97 8.85 -19.53 -0.17 -7.14 16 3 C 0.12 2.84 5.48 -39.20 -0.21 2.63 16 4 C -0.06 -1.22 6.33 -39.36 -0.25 -1.47 16 5 Cl -0.09 -1.66 26.62 -51.86 -1.38 -3.04 16 6 C -0.10 -1.95 5.88 -104.61 -0.62 -2.56 16 7 C -0.11 -1.57 9.61 36.01 0.35 -1.23 16 8 C -0.12 -2.27 9.70 -39.56 -0.38 -2.65 16 9 C -0.08 -1.77 8.78 -39.60 -0.35 -2.12 16 10 C 0.05 1.05 3.02 -104.48 -0.32 0.74 16 11 C 0.09 2.12 1.72 -156.81 -0.27 1.85 16 12 C -0.48 -12.74 8.46 -34.44 -0.29 -13.03 16 13 H 0.06 1.64 7.81 -52.49 -0.41 1.23 16 14 C 0.08 2.08 5.37 -17.82 -0.10 1.98 16 15 N -0.87 -23.89 10.89 55.43 0.60 -23.29 16 16 Si 0.89 21.43 29.54 -169.99 -5.02 16.41 16 17 H -0.28 -6.54 7.11 56.52 0.40 -6.14 16 18 H -0.29 -6.89 7.11 56.52 0.40 -6.49 16 19 H -0.28 -6.68 7.11 56.52 0.40 -6.28 16 20 C -0.21 -4.42 9.44 -26.69 -0.25 -4.68 16 21 C -0.20 -4.21 8.79 -26.69 -0.23 -4.44 16 22 H 0.08 1.30 8.14 -51.93 -0.42 0.87 16 23 H 0.03 0.53 7.95 -51.93 -0.41 0.12 16 24 H 0.04 0.80 6.53 -51.93 -0.34 0.46 16 25 H 0.06 0.94 8.14 -51.93 -0.42 0.52 16 26 H 0.06 0.77 8.09 -51.93 -0.42 0.35 16 27 H 0.06 0.91 6.90 -51.93 -0.36 0.55 16 28 H 0.12 1.81 8.06 -52.49 -0.42 1.39 16 29 H 0.12 2.39 6.86 -52.49 -0.36 2.03 16 30 H 0.26 7.10 8.32 -40.82 -0.34 6.76 16 31 H 0.07 1.34 6.98 -51.93 -0.36 0.98 16 32 H 0.08 1.75 8.14 -51.93 -0.42 1.32 16 33 H 0.08 1.61 8.14 -51.93 -0.42 1.19 16 34 H 0.07 1.27 7.78 -51.93 -0.40 0.87 16 LS Contribution 298.73 15.07 4.50 4.50 Total: -1.00 -28.43 298.73 -7.59 -36.01 By element: Atomic # 1 Polarization: 4.04 SS G_CDS: -4.32 Total: -0.27 kcal Atomic # 6 Polarization: -21.38 SS G_CDS: -1.80 Total: -23.18 kcal Atomic # 7 Polarization: -23.89 SS G_CDS: 0.60 Total: -23.29 kcal Atomic # 8 Polarization: -6.97 SS G_CDS: -0.17 Total: -7.14 kcal Atomic # 14 Polarization: 21.43 SS G_CDS: -5.02 Total: 16.41 kcal Atomic # 17 Polarization: -1.66 SS G_CDS: -1.38 Total: -3.04 kcal Total LS contribution 4.50 Total: 4.50 kcal Total: -28.43 -7.59 -36.01 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260362610.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.664 kcal (2) G-P(sol) polarization free energy of solvation -28.427 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.237 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.586 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.013 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.651 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds