Wall clock time and date at job start Mon Mar 30 2020 07:01:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35931 * 116.99616 * 2 1 4 4 C 1.38861 * 120.05979 * 85.63983 * 3 2 1 5 5 Cl 1.73593 * 120.03977 * 359.97438 * 4 3 2 6 6 C 1.38219 * 119.91902 * 180.02562 * 4 3 2 7 7 C 1.38284 * 120.04369 * 359.97438 * 6 4 3 8 8 C 1.50694 * 119.93988 * 180.02562 * 7 6 4 9 9 C 1.38240 * 120.12344 * 0.04396 * 7 6 4 10 10 C 1.38204 * 120.06997 * 359.67950 * 9 7 6 11 11 C 1.50704 * 120.01519 * 180.29810 * 10 9 7 12 12 C 1.50703 * 115.54470 * 145.08822 * 11 10 9 13 13 H 1.08001 * 119.99993 * 144.24120 * 12 11 10 14 14 C 1.37873 * 120.00090 * 324.23620 * 12 11 10 15 15 N 1.31520 * 119.99886 * 164.11677 * 14 12 11 16 16 Si 1.86801 * 120.00258 * 344.12120 * 14 12 11 17 17 H 1.48500 * 109.47365 * 95.45643 * 16 14 12 18 18 H 1.48498 * 109.47499 * 215.46268 * 16 14 12 19 19 H 1.48503 * 109.46663 * 335.45960 * 16 14 12 20 20 C 1.52996 * 117.50309 * 359.37736 * 11 10 9 21 21 C 1.52999 * 117.49714 * 290.74976 * 11 10 9 22 22 H 1.08996 * 109.47180 * 54.96550 * 1 2 3 23 23 H 1.08998 * 109.47413 * 294.95844 * 1 2 3 24 24 H 1.09004 * 109.47026 * 174.96073 * 1 2 3 25 25 H 1.07992 * 119.97331 * 179.97438 * 6 4 3 26 26 H 1.08995 * 109.47503 * 90.00049 * 8 7 6 27 27 H 1.09005 * 109.47472 * 210.00194 * 8 7 6 28 28 H 1.08998 * 109.47362 * 329.99704 * 8 7 6 29 29 H 1.07993 * 119.96418 * 179.97438 * 9 7 6 30 30 H 0.96999 * 119.99551 * 185.01954 * 15 14 12 31 31 H 1.08997 * 117.49905 * 359.97438 * 20 11 10 32 32 H 1.08996 * 117.50149 * 145.02149 * 20 11 10 33 33 H 1.09001 * 117.49325 * 214.98010 * 21 11 10 34 34 H 1.08993 * 117.49843 * 0.02562 * 21 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2112 0.0000 4 6 2.2803 1.8724 1.1984 5 17 1.7850 1.1536 2.6988 6 6 2.9075 3.1041 1.1949 7 6 3.3016 3.6770 -0.0003 8 6 3.9858 5.0198 -0.0013 9 6 3.0689 3.0205 -1.1944 10 6 2.4473 1.7861 -1.1963 11 6 2.2003 1.0684 -2.4982 12 6 2.3131 -0.4334 -2.4439 13 1 1.6565 -1.0462 -3.0437 14 6 3.2545 -1.0250 -1.6287 15 7 3.1597 -2.3035 -1.3350 16 14 4.6645 -0.0108 -0.9412 17 1 4.3143 0.4642 0.4215 18 1 5.8895 -0.8474 -0.8742 19 1 4.9106 1.1573 -1.8245 20 6 2.6477 1.7649 -3.7849 21 6 1.1587 1.6649 -3.4470 22 1 -0.3633 0.5899 -0.8414 23 1 -0.3634 0.4336 0.9317 24 1 -0.3633 -1.0237 -0.0903 25 1 3.0898 3.6194 2.1264 26 1 5.0637 4.8784 0.0766 27 1 3.7542 5.5449 -0.9280 28 1 3.6342 5.6073 0.8467 29 1 3.3774 3.4705 -2.1264 30 1 3.7787 -2.7033 -0.7042 31 1 3.1203 2.7425 -3.6898 32 1 3.0238 1.1370 -4.5925 33 1 0.5554 0.9709 -4.0324 34 1 0.6525 2.5765 -3.1298 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260362917.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:01:47 Heat of formation + Delta-G solvation = 20.521294 kcal Electronic energy + Delta-G solvation = -19063.964127 eV Core-core repulsion = 16182.619204 eV Total energy + Delta-G solvation = -2881.344923 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -39.89952 -36.84132 -36.57534 -35.77870 -32.06383 -31.52582 -29.96716 -27.15212 -25.99167 -25.05210 -22.65768 -21.68958 -20.83237 -18.97110 -17.37657 -16.52920 -15.79067 -15.20884 -14.84186 -14.28377 -14.19725 -13.65916 -13.49378 -13.31713 -12.74556 -12.40304 -12.26957 -12.10513 -11.91934 -11.34877 -11.27730 -11.08952 -10.71706 -10.53711 -10.45296 -10.30391 -9.99815 -9.57606 -9.31385 -9.26710 -8.96790 -8.26413 -7.95156 -7.66290 -6.00058 -3.91055 1.55220 1.64426 2.56329 3.40338 3.51948 3.54670 3.87043 4.54125 4.61876 4.89645 5.07488 5.20239 5.42642 5.53648 5.58656 5.67096 5.71235 5.88602 5.96364 6.00680 6.05283 6.15426 6.25165 6.31055 6.41952 6.44282 6.50805 6.61183 6.72481 6.89788 7.06474 7.11147 7.23553 7.84296 8.38438 8.56273 8.98794 9.66401 11.09889 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.015722 B = 0.012538 C = 0.009896 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1780.501464 B = 2232.726136 C = 2828.621040 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.049 3.951 2 O -0.275 6.275 3 C 0.133 3.867 4 C -0.062 4.062 5 Cl -0.074 7.074 6 C -0.118 4.118 7 C -0.099 4.099 8 C -0.105 4.105 9 C -0.113 4.113 10 C -0.042 4.042 11 C 0.051 3.949 12 C -0.480 4.480 13 H 0.077 0.923 14 C 0.116 3.884 15 N -0.878 5.878 16 Si 0.844 3.156 17 H -0.264 1.264 18 H -0.298 1.298 19 H -0.259 1.259 20 C -0.209 4.209 21 C -0.180 4.180 22 H 0.041 0.959 23 H 0.027 0.973 24 H 0.089 0.911 25 H 0.127 0.873 26 H 0.067 0.933 27 H 0.065 0.935 28 H 0.064 0.936 29 H 0.129 0.871 30 H 0.263 0.737 31 H 0.070 0.930 32 H 0.088 0.912 33 H 0.086 0.914 34 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.187 11.651 4.072 12.534 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.045 4.045 2 O -0.190 6.190 3 C 0.087 3.913 4 C -0.089 4.089 5 Cl -0.045 7.045 6 C -0.137 4.137 7 C -0.099 4.099 8 C -0.162 4.162 9 C -0.131 4.131 10 C -0.042 4.042 11 C 0.050 3.950 12 C -0.516 4.516 13 H 0.095 0.905 14 C -0.090 4.090 15 N -0.513 5.513 16 Si 0.672 3.328 17 H -0.189 1.189 18 H -0.226 1.226 19 H -0.183 1.183 20 C -0.247 4.247 21 C -0.218 4.218 22 H 0.060 0.940 23 H 0.045 0.955 24 H 0.107 0.893 25 H 0.145 0.855 26 H 0.086 0.914 27 H 0.084 0.916 28 H 0.083 0.917 29 H 0.147 0.853 30 H 0.073 0.927 31 H 0.088 0.912 32 H 0.107 0.893 33 H 0.104 0.896 34 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -2.046 11.203 4.267 12.162 hybrid contribution 0.716 0.541 0.638 1.101 sum -1.330 11.745 4.905 12.797 Atomic orbital electron populations 1.22716 0.80404 1.02828 0.98563 1.86485 1.18124 1.20954 1.93394 1.18201 0.96818 0.86806 0.89463 1.21441 1.05143 0.95537 0.86816 1.98315 1.90234 1.83853 1.32138 1.20622 1.00665 0.94135 0.98229 1.19702 1.00469 0.97290 0.92460 1.20697 0.99980 0.93071 1.02462 1.21074 0.99467 0.94802 0.97777 1.19958 0.96445 0.92668 0.95176 1.18044 0.98937 0.94730 0.83251 1.19966 1.18730 0.85543 1.27384 0.90534 1.24635 0.96433 0.94067 0.93861 1.69849 1.36850 1.12060 1.32493 0.87444 0.82953 0.81233 0.81194 1.18897 1.22579 1.18315 1.23268 0.96546 1.01066 1.03810 1.22831 0.91818 1.01476 1.05653 0.94003 0.95471 0.89296 0.85533 0.91416 0.91554 0.91749 0.85325 0.92673 0.91176 0.89329 0.89582 0.91056 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.96 11.08 101.05 1.12 2.08 16 2 O -0.27 -6.48 6.33 -19.52 -0.12 -6.60 16 3 C 0.13 2.95 2.98 -39.20 -0.12 2.83 16 4 C -0.06 -1.24 5.59 -39.36 -0.22 -1.46 16 5 Cl -0.07 -1.35 28.11 -51.86 -1.46 -2.81 16 6 C -0.12 -2.04 9.48 -39.57 -0.38 -2.41 16 7 C -0.10 -1.65 5.88 -104.61 -0.62 -2.27 16 8 C -0.11 -1.28 10.01 36.00 0.36 -0.92 16 9 C -0.11 -2.15 8.08 -39.59 -0.32 -2.47 16 10 C -0.04 -0.91 2.78 -104.48 -0.29 -1.20 16 11 C 0.05 1.18 1.60 -156.81 -0.25 0.93 16 12 C -0.48 -13.07 8.14 -34.44 -0.28 -13.35 16 13 H 0.08 2.26 8.06 -52.49 -0.42 1.84 16 14 C 0.12 3.28 3.80 -17.82 -0.07 3.22 16 15 N -0.88 -26.36 13.95 55.43 0.77 -25.59 16 16 Si 0.84 22.07 23.74 -169.99 -4.03 18.04 16 17 H -0.26 -6.88 5.60 56.52 0.32 -6.56 16 18 H -0.30 -7.98 7.11 56.52 0.40 -7.58 16 19 H -0.26 -6.52 6.49 56.52 0.37 -6.15 16 20 C -0.21 -4.27 9.57 -26.73 -0.26 -4.52 16 21 C -0.18 -3.57 9.94 -26.73 -0.27 -3.84 16 22 H 0.04 0.78 8.14 -51.93 -0.42 0.36 16 23 H 0.03 0.46 7.80 -51.93 -0.40 0.06 16 24 H 0.09 1.65 8.14 -51.93 -0.42 1.23 16 25 H 0.13 1.83 8.06 -52.49 -0.42 1.40 16 26 H 0.07 0.78 8.14 -51.93 -0.42 0.36 16 27 H 0.07 0.72 8.08 -51.93 -0.42 0.30 16 28 H 0.06 0.66 8.08 -51.93 -0.42 0.24 16 29 H 0.13 2.22 5.93 -52.49 -0.31 1.91 16 30 H 0.26 7.63 8.32 -40.82 -0.34 7.29 16 31 H 0.07 1.28 6.08 -51.93 -0.32 0.96 16 32 H 0.09 1.83 8.14 -51.93 -0.42 1.41 16 33 H 0.09 1.69 8.14 -51.93 -0.42 1.27 16 34 H 0.07 1.27 8.14 -51.93 -0.42 0.85 16 LS Contribution 289.50 15.07 4.36 4.36 Total: -1.00 -30.23 289.50 -6.57 -36.80 By element: Atomic # 1 Polarization: 3.69 SS G_CDS: -4.51 Total: -0.82 kcal Atomic # 6 Polarization: -21.81 SS G_CDS: -1.58 Total: -23.39 kcal Atomic # 7 Polarization: -26.36 SS G_CDS: 0.77 Total: -25.59 kcal Atomic # 8 Polarization: -6.48 SS G_CDS: -0.12 Total: -6.60 kcal Atomic # 14 Polarization: 22.07 SS G_CDS: -4.03 Total: 18.04 kcal Atomic # 17 Polarization: -1.35 SS G_CDS: -1.46 Total: -2.81 kcal Total LS contribution 4.36 Total: 4.36 kcal Total: -30.23 -6.57 -36.80 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260362917.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.321 kcal (2) G-P(sol) polarization free energy of solvation -30.233 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.089 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.567 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.800 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.521 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds