Wall clock time and date at job start Mon Mar 30 2020 06:51:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38283 * 119.94101 * 2 1 4 4 C 1.38217 * 120.04438 * 180.02562 * 3 2 1 5 5 Cl 1.73597 * 120.03855 * 179.97438 * 4 3 2 6 6 C 1.38851 * 119.92161 * 359.97438 * 4 3 2 7 7 O 1.35925 * 120.05820 * 179.97438 * 6 4 3 8 8 C 1.38671 * 119.88184 * 359.97438 * 6 4 3 9 9 C 1.50705 * 120.02009 * 180.02562 * 8 6 4 10 10 C 1.50692 * 115.54749 * 264.28026 * 9 8 6 11 11 H 1.07997 * 120.00454 * 279.57150 * 10 9 8 12 12 C 1.37880 * 119.99612 * 99.57757 * 10 9 8 13 13 N 1.31510 * 120.00314 * 355.30951 * 12 10 9 14 14 Si 1.86802 * 119.99839 * 175.04121 * 12 10 9 15 15 H 1.48497 * 109.47485 * 89.99573 * 14 12 10 16 16 H 1.48507 * 109.46981 * 210.00009 * 14 12 10 17 17 H 1.48509 * 109.47110 * 329.99250 * 14 12 10 18 18 C 1.53001 * 117.51859 * 49.98596 * 9 8 6 19 19 C 1.53000 * 60.00156 * 107.47570 * 18 9 8 20 20 C 1.38189 * 119.95373 * 0.27464 * 8 6 4 21 21 C 1.50706 * 119.95958 * 179.70438 * 20 8 6 22 22 H 1.09000 * 109.47204 * 89.99710 * 1 2 3 23 23 H 1.09007 * 109.46832 * 209.99559 * 1 2 3 24 24 H 1.08993 * 109.47118 * 329.99596 * 1 2 3 25 25 H 1.08001 * 119.97883 * 0.02909 * 3 2 1 26 26 H 0.96698 * 113.99840 * 270.01882 * 7 6 4 27 27 H 0.96999 * 119.99931 * 4.86866 * 13 12 10 28 28 H 1.08996 * 117.49989 * 214.97257 * 18 9 8 29 29 H 1.09002 * 117.49486 * 359.97438 * 18 9 8 30 30 H 1.08996 * 117.50001 * 252.51186 * 19 18 9 31 31 H 1.08999 * 117.49610 * 107.47971 * 19 18 9 32 32 H 1.08996 * 109.47407 * 94.95887 * 21 20 8 33 33 H 1.09000 * 109.47140 * 214.96013 * 21 20 8 34 34 H 1.09001 * 109.46833 * 334.95686 * 21 20 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1972 1.1983 0.0000 4 6 3.5794 1.2008 -0.0005 5 17 4.4457 2.7051 -0.0012 6 6 4.2742 -0.0014 -0.0005 7 8 5.6334 -0.0022 -0.0016 8 6 3.5788 -1.2012 0.0005 9 6 4.3298 -2.5078 0.0011 10 6 4.5356 -3.1397 -1.3513 11 1 3.7381 -3.7051 -1.8103 12 6 5.7423 -2.9961 -2.0028 13 7 6.6809 -2.2324 -1.4879 14 14 6.0467 -3.8925 -3.6132 15 1 5.6156 -3.0349 -4.7463 16 1 7.4944 -4.1960 -3.7448 17 1 5.2721 -5.1595 -3.6286 18 6 5.4389 -2.6853 1.0401 19 6 4.1187 -3.4433 1.1933 20 6 2.1970 -1.1979 -0.0041 21 6 1.4412 -2.5017 -0.0097 22 1 -0.3633 0.0001 -1.0277 23 1 -0.3633 -0.8901 0.5138 24 1 -0.3633 0.8899 0.5139 25 1 1.6559 2.1328 0.0005 26 1 6.0260 -0.0025 -0.8853 27 1 6.5520 -1.8266 -0.6163 28 1 6.3175 -3.2591 0.7453 29 1 5.6258 -1.8567 1.7231 30 1 3.4371 -3.1135 1.9773 31 1 4.1288 -4.5158 0.9992 32 1 1.1787 -2.7739 1.0126 33 1 0.5323 -2.3923 -0.6014 34 1 2.0660 -3.2819 -0.4444 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260368999.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:51:41 Heat of formation + Delta-G solvation = -14.847514 kcal Electronic energy + Delta-G solvation = -18690.849794 eV Core-core repulsion = 15807.971164 eV Total energy + Delta-G solvation = -2882.878630 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -39.80655 -36.69492 -36.49090 -35.72621 -32.00938 -31.80022 -30.81681 -27.04165 -25.50095 -25.27486 -22.43978 -21.31285 -20.45780 -19.18915 -17.67818 -16.53884 -15.87997 -15.25137 -14.67549 -13.89052 -13.81517 -13.77538 -13.16952 -12.98145 -12.61588 -12.47759 -12.25270 -12.10568 -11.91740 -11.40329 -11.25589 -10.90389 -10.87676 -10.54599 -10.40802 -10.34853 -10.20654 -10.11886 -9.42014 -8.92081 -8.48227 -8.38898 -7.81223 -7.73712 -6.37770 -4.20007 1.63639 1.81351 2.59283 3.37384 3.40607 3.56192 3.99536 4.43182 4.88885 5.00117 5.15468 5.27360 5.35719 5.54496 5.62280 5.77082 5.78729 5.99188 6.01136 6.10927 6.16790 6.22931 6.33086 6.43357 6.57759 6.61849 6.69446 6.82528 6.97395 7.09667 7.20609 7.32242 7.45711 8.13872 8.31744 8.42437 8.82341 9.55861 10.99758 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.017217 B = 0.008780 C = 0.007201 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1625.868249 B = 3188.247112 C = 3887.156312 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.106 4.106 2 C -0.097 4.097 3 C -0.121 4.121 4 C -0.068 4.068 5 Cl -0.081 7.081 6 C 0.122 3.878 7 O -0.482 6.482 8 C -0.024 4.024 9 C 0.052 3.948 10 C -0.565 4.565 11 H 0.057 0.943 12 C 0.031 3.969 13 N -0.914 5.914 14 Si 1.066 2.934 15 H -0.288 1.288 16 H -0.284 1.284 17 H -0.288 1.288 18 C -0.161 4.161 19 C -0.194 4.194 20 C -0.066 4.066 21 C -0.112 4.112 22 H 0.067 0.933 23 H 0.067 0.933 24 H 0.060 0.940 25 H 0.124 0.876 26 H 0.396 0.604 27 H 0.294 0.706 28 H 0.089 0.911 29 H 0.073 0.927 30 H 0.065 0.935 31 H 0.082 0.918 32 H 0.061 0.939 33 H 0.057 0.943 34 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.704 4.148 2.369 9.928 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.162 4.162 2 C -0.097 4.097 3 C -0.140 4.140 4 C -0.096 4.096 5 Cl -0.052 7.052 6 C 0.075 3.925 7 O -0.294 6.294 8 C -0.025 4.025 9 C 0.052 3.948 10 C -0.602 4.602 11 H 0.075 0.925 12 C -0.176 4.176 13 N -0.554 5.554 14 Si 0.895 3.105 15 H -0.215 1.215 16 H -0.209 1.209 17 H -0.214 1.214 18 C -0.198 4.198 19 C -0.231 4.231 20 C -0.067 4.067 21 C -0.168 4.168 22 H 0.085 0.915 23 H 0.086 0.914 24 H 0.079 0.921 25 H 0.142 0.858 26 H 0.256 0.744 27 H 0.110 0.890 28 H 0.107 0.893 29 H 0.091 0.909 30 H 0.084 0.916 31 H 0.101 0.899 32 H 0.079 0.921 33 H 0.076 0.924 34 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -7.559 4.105 1.765 8.780 hybrid contribution -0.877 0.520 0.679 1.225 sum -8.436 4.625 2.444 9.926 Atomic orbital electron populations 1.20712 0.91233 1.02311 1.01989 1.19570 0.95727 0.91990 1.02463 1.20516 0.91246 0.98038 1.04194 1.21333 0.92558 0.86105 1.09554 1.98312 1.77483 1.32210 1.97175 1.18062 0.84298 0.89645 1.00451 1.84729 1.14452 1.95760 1.34499 1.20156 0.92630 0.94944 0.94767 1.17659 0.96833 0.88988 0.91331 1.21280 1.01330 1.35601 1.01988 0.92498 1.25781 0.92485 0.95662 1.03635 1.70699 1.36393 1.28107 1.20164 0.83586 0.76198 0.75872 0.74871 1.21480 1.20919 1.21428 1.22759 0.92758 1.01659 1.02670 1.23061 1.00448 0.98023 1.01592 1.19530 0.92771 0.94752 0.99606 1.20827 0.99395 0.95328 1.01245 0.91468 0.91406 0.92053 0.85779 0.74406 0.88998 0.89274 0.90864 0.91632 0.89918 0.92063 0.92406 0.89409 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.32 9.21 36.01 0.33 -0.99 16 2 C -0.10 -1.63 5.88 -104.60 -0.62 -2.24 16 3 C -0.12 -2.06 9.48 -39.57 -0.38 -2.44 16 4 C -0.07 -1.32 6.33 -39.36 -0.25 -1.57 16 5 Cl -0.08 -1.39 28.51 -51.86 -1.48 -2.87 16 6 C 0.12 2.65 6.56 -39.19 -0.26 2.39 16 7 O -0.48 -10.88 9.65 -19.50 -0.19 -11.06 16 8 C -0.02 -0.52 5.00 -104.48 -0.52 -1.05 16 9 C 0.05 1.24 0.37 -156.81 -0.06 1.18 16 10 C -0.56 -14.67 8.45 -34.44 -0.29 -14.97 16 11 H 0.06 1.49 7.34 -52.49 -0.39 1.10 16 12 C 0.03 0.81 5.30 -17.82 -0.09 0.71 16 13 N -0.91 -24.98 12.43 55.43 0.69 -24.30 16 14 Si 1.07 23.80 29.91 -169.99 -5.08 18.72 16 15 H -0.29 -6.30 7.11 56.52 0.40 -5.89 16 16 H -0.28 -6.38 7.11 56.52 0.40 -5.98 16 17 H -0.29 -6.18 7.11 56.52 0.40 -5.78 16 18 C -0.16 -3.77 6.96 -26.73 -0.19 -3.96 16 19 C -0.19 -4.15 8.57 -26.73 -0.23 -4.38 16 20 C -0.07 -1.27 5.86 -104.64 -0.61 -1.88 16 21 C -0.11 -1.88 7.99 36.01 0.29 -1.59 16 22 H 0.07 0.78 8.14 -51.93 -0.42 0.36 16 23 H 0.07 0.78 6.80 -51.93 -0.35 0.43 16 24 H 0.06 0.66 8.08 -51.93 -0.42 0.24 16 25 H 0.12 1.78 8.06 -52.49 -0.42 1.36 16 26 H 0.40 9.05 7.63 45.56 0.35 9.40 16 27 H 0.29 7.80 3.02 -40.82 -0.12 7.68 16 28 H 0.09 2.25 7.34 -51.93 -0.38 1.86 16 29 H 0.07 1.70 7.69 -51.93 -0.40 1.30 16 30 H 0.07 1.29 8.14 -51.93 -0.42 0.87 16 31 H 0.08 1.74 8.14 -51.93 -0.42 1.32 16 32 H 0.06 0.93 8.14 -51.93 -0.42 0.51 16 33 H 0.06 0.83 7.00 -51.93 -0.36 0.47 16 34 H 0.09 1.68 5.64 -51.93 -0.29 1.39 16 LS Contribution 288.94 15.07 4.35 4.35 Total: -1.00 -27.45 288.94 -7.86 -35.31 By element: Atomic # 1 Polarization: 13.91 SS G_CDS: -3.28 Total: 10.63 kcal Atomic # 6 Polarization: -27.91 SS G_CDS: -2.87 Total: -30.78 kcal Atomic # 7 Polarization: -24.98 SS G_CDS: 0.69 Total: -24.30 kcal Atomic # 8 Polarization: -10.88 SS G_CDS: -0.19 Total: -11.06 kcal Atomic # 14 Polarization: 23.80 SS G_CDS: -5.08 Total: 18.72 kcal Atomic # 17 Polarization: -1.39 SS G_CDS: -1.48 Total: -2.87 kcal Total LS contribution 4.35 Total: 4.35 kcal Total: -27.45 -7.86 -35.31 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260368999.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 20.458 kcal (2) G-P(sol) polarization free energy of solvation -27.447 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.989 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.858 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.306 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.848 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds