Wall clock time and date at job start Mon Mar 30 2020 07:50:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35908 * 116.99286 * 2 1 4 4 C 1.38722 * 120.05017 * 359.97186 * 3 2 1 5 5 C 1.38245 * 119.92869 * 179.74860 * 4 3 2 6 6 Cl 1.73600 * 119.98430 * 180.29630 * 5 4 3 7 7 C 1.38407 * 120.02794 * 0.55129 * 5 4 3 8 8 C 1.38220 * 120.09529 * 359.44790 * 7 5 4 9 9 C 1.38171 * 120.07334 * 0.27518 * 8 7 5 10 10 C 1.50697 * 120.01713 * 179.97438 * 9 8 7 11 11 H 1.08993 * 109.47052 * 180.02562 * 10 9 8 12 12 C 1.50702 * 109.47025 * 59.99979 * 10 9 8 13 13 H 1.07994 * 120.00158 * 304.89050 * 12 10 9 14 14 C 1.37876 * 119.99880 * 124.88606 * 12 10 9 15 15 N 1.31514 * 120.00070 * 184.79588 * 14 12 10 16 16 Si 1.86803 * 120.00196 * 4.80256 * 14 12 10 17 17 H 1.48504 * 109.47021 * 84.60271 * 16 14 12 18 18 H 1.48496 * 109.47170 * 204.60941 * 16 14 12 19 19 H 1.48507 * 109.46884 * 324.60529 * 16 14 12 20 20 C 1.53007 * 109.47316 * 300.00221 * 10 9 8 21 21 C 1.52995 * 117.49794 * 243.83862 * 20 10 9 22 22 C 1.52994 * 117.50015 * 175.21255 * 20 10 9 23 23 H 1.08992 * 109.47761 * 300.00247 * 1 2 3 24 24 H 1.08998 * 109.47022 * 60.00944 * 1 2 3 25 25 H 1.09004 * 109.46281 * 180.02562 * 1 2 3 26 26 H 1.08003 * 120.03907 * 0.02562 * 4 3 2 27 27 H 1.08002 * 119.94953 * 179.72286 * 7 5 4 28 28 H 1.08011 * 119.96141 * 180.29863 * 8 7 5 29 29 H 0.96999 * 120.00170 * 179.97438 * 15 14 12 30 30 H 1.09000 * 115.54744 * 29.54234 * 20 10 9 31 31 H 1.08995 * 117.50154 * 359.97438 * 21 20 10 32 32 H 1.08999 * 117.49945 * 145.02326 * 21 20 10 33 33 H 1.08998 * 117.49911 * 214.97873 * 22 20 10 34 34 H 1.09010 * 117.49578 * 0.02562 * 22 20 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2110 0.0000 4 6 1.2912 2.3750 -0.0006 5 6 1.9213 3.6055 0.0047 6 17 0.9783 5.0631 0.0117 7 6 3.3036 3.6759 -0.0010 8 6 4.0566 2.5169 -0.0004 9 6 3.4311 1.2848 0.0001 10 6 4.2534 0.0219 0.0001 11 1 3.5904 -0.8432 0.0001 12 6 5.1232 -0.0111 1.2304 13 1 5.7911 0.8109 1.4417 14 6 5.0663 -1.0906 2.0861 15 7 5.7538 -1.0781 3.2072 16 14 4.0127 -2.5712 1.6532 17 1 4.7808 -3.4836 0.7683 18 1 3.6340 -3.2897 2.8963 19 1 2.7857 -2.1171 0.9506 20 6 5.1358 -0.0123 -1.2494 21 6 4.8832 -1.1309 -2.2621 22 6 6.1323 -1.1659 -1.3792 23 1 -0.3634 0.5138 0.8899 24 1 -0.3633 0.5137 -0.8901 25 1 -0.3632 -1.0278 0.0005 26 1 0.2126 2.3200 -0.0006 27 1 3.7945 4.6379 -0.0014 28 1 5.1352 2.5743 0.0000 29 1 5.7135 -1.8374 3.8094 30 1 5.4382 0.9602 -1.6381 31 1 4.0888 -1.8427 -2.0381 32 1 5.0194 -0.8946 -3.3174 33 1 7.0901 -0.9526 -1.8536 34 1 6.1589 -1.9008 -0.5745 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260392139.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:50:53 Heat of formation + Delta-G solvation = -0.277723 kcal Electronic energy + Delta-G solvation = -18223.635480 eV Core-core repulsion = 15341.388644 eV Total energy + Delta-G solvation = -2882.246836 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -39.87894 -37.38328 -36.83878 -35.80853 -32.81914 -31.34391 -29.81046 -27.79618 -26.72644 -23.52509 -22.06382 -21.47450 -21.30768 -18.99326 -17.79052 -17.04437 -15.89235 -15.43646 -15.39627 -14.70696 -14.43289 -13.91770 -13.67222 -13.21398 -12.97583 -12.83383 -12.37226 -11.97164 -11.62292 -11.47890 -11.33688 -11.07078 -10.70339 -10.59601 -10.57581 -10.52024 -10.29104 -9.69545 -9.63215 -9.24058 -8.77531 -8.50040 -8.27220 -7.53867 -6.10793 -4.09435 1.68688 1.82749 2.40894 3.29240 3.36992 3.43211 3.69437 4.16636 4.41436 4.72666 5.14394 5.19837 5.24563 5.34452 5.42642 5.45615 5.63345 5.68362 5.83271 5.85808 6.01216 6.11275 6.22929 6.28756 6.44220 6.58551 6.61197 6.74587 6.89725 6.97885 7.16462 7.21303 7.37428 7.68981 7.82533 8.46856 8.93599 9.51296 11.01508 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.019783 B = 0.006998 C = 0.006701 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1415.041861 B = 4000.043531 C = 4177.602182 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.302 6.302 3 C 0.124 3.876 4 C -0.203 4.203 5 C -0.021 4.021 6 Cl -0.092 7.092 7 C -0.145 4.145 8 C -0.066 4.066 9 C -0.045 4.045 10 C 0.065 3.935 11 H 0.065 0.935 12 C -0.494 4.494 13 H 0.077 0.923 14 C 0.077 3.923 15 N -0.896 5.896 16 Si 0.857 3.143 17 H -0.274 1.274 18 H -0.291 1.291 19 H -0.246 1.246 20 C -0.120 4.120 21 C -0.205 4.205 22 C -0.166 4.166 23 H 0.052 0.948 24 H 0.051 0.949 25 H 0.095 0.905 26 H 0.128 0.872 27 H 0.125 0.875 28 H 0.137 0.863 29 H 0.264 0.736 30 H 0.088 0.912 31 H 0.082 0.918 32 H 0.078 0.922 33 H 0.080 0.920 34 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.574 5.075 -8.306 12.971 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.215 6.215 3 C 0.078 3.922 4 C -0.222 4.222 5 C -0.047 4.047 6 Cl -0.063 7.063 7 C -0.164 4.164 8 C -0.085 4.085 9 C -0.046 4.046 10 C 0.046 3.954 11 H 0.083 0.917 12 C -0.531 4.531 13 H 0.095 0.905 14 C -0.126 4.126 15 N -0.533 5.533 16 Si 0.685 3.315 17 H -0.200 1.200 18 H -0.218 1.218 19 H -0.170 1.170 20 C -0.139 4.139 21 C -0.242 4.242 22 C -0.203 4.203 23 H 0.071 0.929 24 H 0.069 0.931 25 H 0.113 0.887 26 H 0.146 0.854 27 H 0.143 0.857 28 H 0.155 0.845 29 H 0.074 0.926 30 H 0.106 0.894 31 H 0.101 0.899 32 H 0.097 0.903 33 H 0.098 0.902 34 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -8.530 4.893 -8.120 12.753 hybrid contribution -0.877 -0.514 0.018 1.016 sum -9.406 4.379 -8.102 13.164 Atomic orbital electron populations 1.23004 0.79645 1.03461 1.00885 1.86239 1.20197 1.26313 1.88723 1.18750 0.92034 0.83450 0.97935 1.20873 0.99825 0.90831 1.10673 1.20376 0.91549 0.86049 1.06758 1.98318 1.73394 1.37369 1.97239 1.20887 0.91307 0.99333 1.04901 1.20807 1.00291 0.90088 0.97265 1.20019 0.89966 0.97915 0.96707 1.18047 0.92887 0.91415 0.93060 0.91690 1.20800 1.21814 1.06029 1.04443 0.90496 1.25030 0.95042 0.98087 0.94413 1.69887 1.41986 1.31105 1.10323 0.87138 0.82837 0.83415 0.78134 1.19968 1.21789 1.17008 1.22593 1.01589 0.92577 0.97136 1.23033 1.01036 1.04304 0.95858 1.22749 0.92614 1.03257 1.01676 0.92933 0.93052 0.88707 0.85397 0.85674 0.84493 0.92599 0.89412 0.89905 0.90313 0.90192 0.88686 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.34 9.81 101.05 0.99 1.33 16 2 O -0.30 -5.72 9.13 -19.45 -0.18 -5.90 16 3 C 0.12 2.39 6.66 -39.22 -0.26 2.13 16 4 C -0.20 -3.39 8.82 -39.40 -0.35 -3.73 16 5 C -0.02 -0.34 6.32 -39.52 -0.25 -0.59 16 6 Cl -0.09 -1.29 28.95 -51.86 -1.50 -2.79 16 7 C -0.15 -2.40 9.83 -39.53 -0.39 -2.79 16 8 C -0.07 -1.23 8.52 -39.61 -0.34 -1.57 16 9 C -0.04 -0.93 4.78 -104.47 -0.50 -1.43 16 10 C 0.06 1.46 2.04 -92.92 -0.19 1.27 16 11 H 0.07 1.55 3.06 -51.93 -0.16 1.39 16 12 C -0.49 -13.10 7.94 -34.44 -0.27 -13.37 16 13 H 0.08 2.20 7.89 -52.49 -0.41 1.79 16 14 C 0.08 2.13 5.47 -17.82 -0.10 2.04 16 15 N -0.90 -26.67 13.96 55.43 0.77 -25.90 16 16 Si 0.86 20.97 26.75 -169.99 -4.55 16.42 16 17 H -0.27 -6.53 7.11 56.52 0.40 -6.13 16 18 H -0.29 -7.20 7.11 56.52 0.40 -6.80 16 19 H -0.25 -5.81 6.07 56.52 0.34 -5.47 16 20 C -0.12 -2.41 5.10 -90.62 -0.46 -2.87 16 21 C -0.21 -3.70 10.18 -26.73 -0.27 -3.97 16 22 C -0.17 -3.24 9.78 -26.73 -0.26 -3.50 16 23 H 0.05 0.64 7.66 -51.93 -0.40 0.25 16 24 H 0.05 0.58 7.66 -51.93 -0.40 0.18 16 25 H 0.09 1.07 8.14 -51.93 -0.42 0.65 16 26 H 0.13 1.82 6.30 -52.48 -0.33 1.49 16 27 H 0.13 1.77 8.06 -52.49 -0.42 1.35 16 28 H 0.14 2.46 7.81 -52.48 -0.41 2.05 16 29 H 0.26 7.45 8.31 -40.82 -0.34 7.11 16 30 H 0.09 1.63 7.40 -51.93 -0.38 1.25 16 31 H 0.08 1.53 8.03 -51.93 -0.42 1.11 16 32 H 0.08 1.23 8.14 -51.93 -0.42 0.80 16 33 H 0.08 1.38 8.14 -51.93 -0.42 0.96 16 34 H 0.09 2.08 7.37 -51.92 -0.38 1.70 16 LS Contribution 298.29 15.07 4.50 4.50 Total: -1.00 -29.27 298.29 -7.78 -37.06 By element: Atomic # 1 Polarization: 7.85 SS G_CDS: -4.18 Total: 3.67 kcal Atomic # 6 Polarization: -24.41 SS G_CDS: -2.65 Total: -27.06 kcal Atomic # 7 Polarization: -26.67 SS G_CDS: 0.77 Total: -25.90 kcal Atomic # 8 Polarization: -5.72 SS G_CDS: -0.18 Total: -5.90 kcal Atomic # 14 Polarization: 20.97 SS G_CDS: -4.55 Total: 16.42 kcal Atomic # 17 Polarization: -1.29 SS G_CDS: -1.50 Total: -2.79 kcal Total LS contribution 4.50 Total: 4.50 kcal Total: -29.27 -7.78 -37.06 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260392139.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.779 kcal (2) G-P(sol) polarization free energy of solvation -29.274 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.505 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.783 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.057 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.278 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds