Wall clock time and date at job start Mon Mar 30 2020 07:50:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35895 * 117.00318 * 2 1 4 4 C 1.38731 * 120.04865 * 0.02564 * 3 2 1 5 5 C 1.38237 * 119.93002 * 179.97438 * 4 3 2 6 6 Cl 1.73604 * 119.98213 * 179.97438 * 5 4 3 7 7 C 1.38399 * 120.02917 * 0.02562 * 5 4 3 8 8 C 1.38221 * 120.10228 * 359.74177 * 7 5 4 9 9 C 1.38179 * 120.06267 * 0.51152 * 8 7 5 10 10 C 1.50702 * 120.01084 * 179.76339 * 9 8 7 11 11 H 1.09000 * 109.46873 * 179.72260 * 10 9 8 12 12 C 1.50698 * 109.47833 * 299.72470 * 10 9 8 13 13 H 1.08009 * 119.99742 * 64.94083 * 12 10 9 14 14 C 1.37877 * 120.00369 * 244.95252 * 12 10 9 15 15 N 1.31506 * 119.99932 * 184.78719 * 14 12 10 16 16 Si 1.86801 * 119.99576 * 4.78040 * 14 12 10 17 17 H 1.48495 * 109.47158 * 84.63752 * 16 14 12 18 18 H 1.48507 * 109.47019 * 204.63172 * 16 14 12 19 19 H 1.48503 * 109.47382 * 324.63410 * 16 14 12 20 20 C 1.53004 * 109.46895 * 59.72874 * 10 9 8 21 21 C 1.53004 * 117.49696 * 174.85478 * 20 10 9 22 22 C 1.52995 * 60.03060 * 252.49740 * 21 20 10 23 23 H 1.09003 * 109.47142 * 300.00084 * 1 2 3 24 24 H 1.09000 * 109.47397 * 59.99132 * 1 2 3 25 25 H 1.08996 * 109.47617 * 180.02562 * 1 2 3 26 26 H 1.08000 * 120.03043 * 359.95517 * 4 3 2 27 27 H 1.08007 * 119.95293 * 179.97438 * 7 5 4 28 28 H 1.08000 * 119.96904 * 180.25179 * 8 7 5 29 29 H 0.97001 * 120.00043 * 179.97438 * 15 14 12 30 30 H 1.09001 * 115.55212 * 320.52089 * 20 10 9 31 31 H 1.09004 * 117.49943 * 0.02562 * 21 20 10 32 32 H 1.09000 * 117.49931 * 144.99416 * 21 20 10 33 33 H 1.09003 * 117.50131 * 107.50193 * 22 21 20 34 34 H 1.09000 * 117.50142 * 252.52565 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 1.2915 2.3750 0.0005 5 6 1.9217 3.6053 0.0011 6 17 0.9788 5.0630 0.0011 7 6 3.3039 3.6755 0.0005 8 6 4.0569 2.5165 0.0049 9 6 3.4312 1.2845 -0.0010 10 6 4.2534 0.0215 -0.0016 11 1 3.5903 -0.8436 -0.0015 12 6 5.1223 -0.0118 -1.2324 13 1 5.9004 0.7256 -1.3641 14 6 4.9240 -0.9834 -2.1904 15 7 5.7409 -1.0707 -3.2172 16 14 3.4950 -2.1757 -2.0294 17 1 2.2688 -1.5580 -2.5950 18 1 3.8067 -3.4247 -2.7697 19 1 3.2736 -2.4923 -0.5955 20 6 5.1365 -0.0128 1.2473 21 6 5.9623 -1.2770 1.4942 22 6 4.7412 -0.9792 2.3666 23 1 -0.3633 0.5139 0.8900 24 1 -0.3634 0.5140 -0.8899 25 1 -0.3634 -1.0276 0.0005 26 1 0.2129 2.3200 0.0002 27 1 3.7950 4.6375 0.0005 28 1 5.1354 2.5738 0.0085 29 1 5.6016 -1.7545 -3.8910 30 1 5.5772 0.9409 1.5378 31 1 5.8767 -2.0841 0.7665 32 1 6.9462 -1.1550 1.9470 33 1 3.8519 -1.5906 2.2133 34 1 4.9218 -0.6609 3.3933 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260392143.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:50:55 Heat of formation + Delta-G solvation = -0.988900 kcal Electronic energy + Delta-G solvation = -18259.074648 eV Core-core repulsion = 15376.796973 eV Total energy + Delta-G solvation = -2882.277675 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -39.88968 -37.38487 -36.82487 -35.80269 -32.87539 -31.32235 -29.81324 -27.82134 -26.74014 -23.47165 -22.08467 -21.50732 -21.31330 -19.01321 -17.79331 -17.04188 -15.91753 -15.44493 -15.38790 -14.73457 -14.47675 -13.92506 -13.64251 -13.18174 -12.95607 -12.84135 -12.37608 -11.96786 -11.63953 -11.51732 -11.34560 -10.99678 -10.76294 -10.70436 -10.60329 -10.49745 -10.29486 -9.72473 -9.61148 -9.20275 -8.76956 -8.56343 -8.27151 -7.54092 -6.11715 -4.10618 1.69188 1.82647 2.41040 3.30604 3.36433 3.42810 3.69761 4.16970 4.41185 4.70647 5.14005 5.19238 5.23262 5.33344 5.42347 5.46133 5.62105 5.67829 5.82546 5.84282 5.99991 6.11192 6.24146 6.28776 6.42833 6.57983 6.60800 6.73109 6.89584 6.95608 7.11912 7.21093 7.38954 7.67989 7.80950 8.46017 8.92558 9.50459 11.00452 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.018479 B = 0.007354 C = 0.006962 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1514.870091 B = 3806.574816 C = 4020.701864 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.305 6.305 3 C 0.121 3.879 4 C -0.201 4.201 5 C -0.022 4.022 6 Cl -0.092 7.092 7 C -0.144 4.144 8 C -0.065 4.065 9 C -0.047 4.047 10 C 0.065 3.935 11 H 0.065 0.935 12 C -0.494 4.494 13 H 0.077 0.923 14 C 0.076 3.924 15 N -0.895 5.895 16 Si 0.872 3.128 17 H -0.273 1.273 18 H -0.293 1.293 19 H -0.259 1.259 20 C -0.115 4.115 21 C -0.166 4.166 22 C -0.204 4.204 23 H 0.052 0.948 24 H 0.052 0.948 25 H 0.095 0.905 26 H 0.128 0.872 27 H 0.125 0.875 28 H 0.137 0.863 29 H 0.264 0.736 30 H 0.089 0.911 31 H 0.092 0.908 32 H 0.080 0.920 33 H 0.084 0.916 34 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.625 5.117 8.274 13.001 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.219 6.219 3 C 0.076 3.924 4 C -0.221 4.221 5 C -0.048 4.048 6 Cl -0.063 7.063 7 C -0.163 4.163 8 C -0.084 4.084 9 C -0.049 4.049 10 C 0.046 3.954 11 H 0.083 0.917 12 C -0.532 4.532 13 H 0.095 0.905 14 C -0.127 4.127 15 N -0.532 5.532 16 Si 0.700 3.300 17 H -0.199 1.199 18 H -0.220 1.220 19 H -0.184 1.184 20 C -0.134 4.134 21 C -0.203 4.203 22 C -0.241 4.241 23 H 0.071 0.929 24 H 0.071 0.929 25 H 0.113 0.887 26 H 0.146 0.854 27 H 0.143 0.857 28 H 0.155 0.845 29 H 0.074 0.926 30 H 0.107 0.893 31 H 0.111 0.889 32 H 0.099 0.901 33 H 0.102 0.898 34 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -8.582 4.939 8.083 12.782 hybrid contribution -1.154 -0.308 -0.184 1.209 sum -9.736 4.631 7.900 13.365 Atomic orbital electron populations 1.23010 0.79529 1.03498 1.00960 1.86168 1.20325 1.26546 1.88823 1.18746 0.92045 0.83388 0.98249 1.20871 0.99816 0.90845 1.10558 1.20363 0.91552 0.86030 1.06898 1.98318 1.73408 1.37362 1.97250 1.20890 0.91303 0.99342 1.04805 1.20791 1.00255 0.90066 0.97261 1.20176 0.89950 0.98237 0.96503 1.18037 0.92944 0.91155 0.93237 0.91727 1.20792 1.16114 1.14627 1.01619 0.90477 1.25047 0.95649 0.96972 0.95025 1.69887 1.36754 1.34546 1.12031 0.86912 0.83643 0.80728 0.78711 1.19854 1.21958 1.18412 1.22444 1.01691 0.93325 0.95939 1.22695 0.94044 1.01401 1.02149 1.23029 0.99676 1.05919 0.95497 0.92926 0.92927 0.88690 0.85411 0.85672 0.84524 0.92580 0.89327 0.88920 0.90124 0.89768 0.90328 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.34 9.81 101.05 0.99 1.34 16 2 O -0.31 -5.81 9.26 -19.41 -0.18 -5.99 16 3 C 0.12 2.35 6.66 -39.22 -0.26 2.09 16 4 C -0.20 -3.40 8.82 -39.40 -0.35 -3.74 16 5 C -0.02 -0.36 6.32 -39.52 -0.25 -0.61 16 6 Cl -0.09 -1.30 28.95 -51.86 -1.50 -2.80 16 7 C -0.14 -2.40 9.83 -39.53 -0.39 -2.79 16 8 C -0.07 -1.22 8.66 -39.61 -0.34 -1.56 16 9 C -0.05 -0.99 4.78 -104.47 -0.50 -1.49 16 10 C 0.07 1.48 1.97 -92.92 -0.18 1.29 16 11 H 0.06 1.55 3.13 -51.93 -0.16 1.39 16 12 C -0.49 -13.16 8.27 -34.44 -0.28 -13.45 16 13 H 0.08 2.21 8.06 -52.48 -0.42 1.78 16 14 C 0.08 2.12 5.47 -17.82 -0.10 2.02 16 15 N -0.90 -26.68 13.96 55.43 0.77 -25.90 16 16 Si 0.87 21.61 27.38 -169.99 -4.66 16.95 16 17 H -0.27 -6.75 7.11 56.52 0.40 -6.35 16 18 H -0.29 -7.24 7.11 56.52 0.40 -6.84 16 19 H -0.26 -6.17 6.21 56.52 0.35 -5.82 16 20 C -0.12 -2.31 4.94 -90.58 -0.45 -2.76 16 21 C -0.17 -3.18 10.00 -26.73 -0.27 -3.44 16 22 C -0.20 -3.63 10.18 -26.70 -0.27 -3.90 16 23 H 0.05 0.60 7.66 -51.93 -0.40 0.20 16 24 H 0.05 0.66 7.66 -51.93 -0.40 0.26 16 25 H 0.09 1.08 8.14 -51.93 -0.42 0.66 16 26 H 0.13 1.84 6.30 -52.49 -0.33 1.51 16 27 H 0.13 1.78 8.06 -52.48 -0.42 1.35 16 28 H 0.14 2.45 7.79 -52.49 -0.41 2.05 16 29 H 0.26 7.46 8.31 -40.82 -0.34 7.12 16 30 H 0.09 1.66 7.40 -51.93 -0.38 1.27 16 31 H 0.09 1.94 8.14 -51.93 -0.42 1.52 16 32 H 0.08 1.37 8.14 -51.93 -0.42 0.95 16 33 H 0.08 1.53 8.08 -51.93 -0.42 1.11 16 34 H 0.08 1.21 8.14 -51.93 -0.42 0.79 16 LS Contribution 300.70 15.07 4.53 4.53 Total: -1.00 -29.35 300.70 -7.90 -37.25 By element: Atomic # 1 Polarization: 7.19 SS G_CDS: -4.22 Total: 2.96 kcal Atomic # 6 Polarization: -24.36 SS G_CDS: -2.65 Total: -27.01 kcal Atomic # 7 Polarization: -26.68 SS G_CDS: 0.77 Total: -25.90 kcal Atomic # 8 Polarization: -5.81 SS G_CDS: -0.18 Total: -5.99 kcal Atomic # 14 Polarization: 21.61 SS G_CDS: -4.66 Total: 16.95 kcal Atomic # 17 Polarization: -1.30 SS G_CDS: -1.50 Total: -2.80 kcal Total LS contribution 4.53 Total: 4.53 kcal Total: -29.35 -7.90 -37.25 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260392143.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.265 kcal (2) G-P(sol) polarization free energy of solvation -29.349 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.916 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.905 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.254 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.989 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds