Wall clock time and date at job start Mon Mar 30 2020 07:51:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35905 * 117.00068 * 2 1 4 4 C 1.38722 * 120.04873 * 359.97438 * 3 2 1 5 5 C 1.38240 * 119.93321 * 179.97438 * 4 3 2 6 6 Cl 1.73603 * 119.98901 * 180.02562 * 5 4 3 7 7 C 1.38411 * 120.02820 * 0.02562 * 5 4 3 8 8 C 1.38232 * 120.09608 * 359.97438 * 7 5 4 9 9 C 1.50698 * 119.96299 * 180.02562 * 8 7 5 10 10 H 1.09004 * 109.47057 * 180.02562 * 9 8 7 11 11 C 1.50700 * 109.46940 * 60.00580 * 9 8 7 12 12 H 1.08000 * 119.99362 * 265.21950 * 11 9 8 13 13 C 1.37875 * 120.00152 * 85.22109 * 11 9 8 14 14 N 1.31511 * 120.00224 * 5.08946 * 13 11 9 15 15 Si 1.86799 * 119.99775 * 185.08876 * 13 11 9 16 16 H 1.48499 * 109.47159 * 90.00244 * 15 13 11 17 17 H 1.48495 * 109.47177 * 210.00037 * 15 13 11 18 18 H 1.48494 * 109.47523 * 330.00159 * 15 13 11 19 19 C 1.52997 * 109.47373 * 300.00214 * 9 8 7 20 20 C 1.52999 * 117.49896 * 254.13001 * 19 9 8 21 21 C 1.53006 * 117.49976 * 185.47062 * 19 9 8 22 22 C 1.38175 * 120.06632 * 0.02562 * 8 7 5 23 23 H 1.09004 * 109.46784 * 60.00172 * 1 2 3 24 24 H 1.08994 * 109.47647 * 180.02562 * 1 2 3 25 25 H 1.09004 * 109.47222 * 300.00755 * 1 2 3 26 26 H 1.07998 * 120.03466 * 0.25692 * 4 3 2 27 27 H 1.07994 * 119.95051 * 179.97438 * 7 5 4 28 28 H 0.96993 * 120.00231 * 179.97438 * 14 13 11 29 29 H 1.09003 * 115.55028 * 39.79768 * 19 9 8 30 30 H 1.08997 * 117.50133 * 0.02562 * 20 19 9 31 31 H 1.09005 * 117.50001 * 145.02074 * 20 19 9 32 32 H 1.08995 * 117.49838 * 214.98206 * 21 19 9 33 33 H 1.08998 * 117.49488 * 359.97438 * 21 19 9 34 34 H 1.07997 * 120.01113 * 179.97438 * 22 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 1.2914 2.3750 -0.0005 5 6 1.9215 3.6054 0.0000 6 17 0.9787 5.0631 0.0000 7 6 3.3039 3.6758 0.0005 8 6 4.0569 2.5165 0.0011 9 6 5.5617 2.5966 0.0022 10 1 5.9791 1.5897 0.0021 11 6 6.0246 3.3325 1.2332 12 1 6.2220 4.3933 1.1857 13 6 6.1961 2.6517 2.4198 14 7 6.0531 1.3448 2.4547 15 14 6.6316 3.5855 3.9778 16 1 5.3856 3.9896 4.6774 17 1 7.4387 2.7134 4.8684 18 1 7.4167 4.7960 3.6264 19 6 6.0337 3.3440 -1.2465 20 6 6.6648 2.5170 -2.3685 21 6 7.5412 3.4200 -1.4969 22 6 3.4312 1.2846 0.0005 23 1 -0.3633 0.5138 -0.8901 24 1 -0.3634 -1.0276 0.0005 25 1 -0.3634 0.5140 0.8899 26 1 0.2129 2.3201 0.0032 27 1 3.7948 4.6377 0.0005 28 1 6.1741 0.8658 3.2893 29 1 5.4317 4.2060 -1.5342 30 1 6.7434 1.4405 -2.2171 31 1 6.4783 2.8352 -3.3942 32 1 7.9309 4.3318 -1.9494 33 1 8.1967 2.9379 -0.7716 34 1 4.0204 0.3795 0.0005 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260430362.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:51:15 Heat of formation + Delta-G solvation = -7.721396 kcal Electronic energy + Delta-G solvation = -17887.984522 eV Core-core repulsion = 15005.414904 eV Total energy + Delta-G solvation = -2882.569618 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -39.63022 -37.66554 -36.50584 -35.58762 -32.94053 -30.79611 -29.79765 -27.28919 -26.79059 -23.70587 -21.96465 -21.54706 -21.04249 -19.20436 -17.39789 -16.42245 -15.79015 -15.40157 -15.21056 -14.83865 -14.63457 -14.02825 -13.47056 -13.17548 -12.70179 -12.62548 -12.07405 -11.58566 -11.49659 -11.45725 -11.15113 -10.93338 -10.77388 -10.68185 -10.54711 -10.37292 -10.30514 -9.88447 -9.40912 -9.31963 -8.81126 -8.51516 -7.85756 -7.56718 -6.11394 -4.14622 1.91715 2.10560 2.60526 3.28220 3.35449 3.37661 3.66704 4.33592 4.45515 4.74902 5.19038 5.24021 5.31829 5.39073 5.59328 5.62102 5.72634 5.80783 5.86086 5.92007 6.22647 6.29841 6.39229 6.44955 6.52399 6.74919 6.82948 6.90891 6.97129 7.04499 7.33443 7.52100 7.74393 7.86817 7.88711 8.25385 8.90899 9.49141 10.96553 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.013712 B = 0.007223 C = 0.006961 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2041.554856 B = 3875.441339 C = 4021.599925 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.317 6.317 3 C 0.128 3.872 4 C -0.233 4.233 5 C -0.002 4.002 6 Cl -0.095 7.095 7 C -0.135 4.135 8 C 0.033 3.967 9 C 0.096 3.904 10 H 0.066 0.934 11 C -0.504 4.504 12 H 0.061 0.939 13 C 0.068 3.932 14 N -0.881 5.881 15 Si 0.889 3.111 16 H -0.280 1.280 17 H -0.287 1.287 18 H -0.272 1.272 19 C -0.121 4.121 20 C -0.199 4.199 21 C -0.170 4.170 22 C -0.139 4.139 23 H 0.051 0.949 24 H 0.094 0.906 25 H 0.051 0.949 26 H 0.124 0.876 27 H 0.128 0.872 28 H 0.263 0.737 29 H 0.086 0.914 30 H 0.087 0.913 31 H 0.077 0.923 32 H 0.077 0.923 33 H 0.095 0.905 34 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.701 0.642 -6.027 9.800 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.231 6.231 3 C 0.083 3.917 4 C -0.252 4.252 5 C -0.028 4.028 6 Cl -0.067 7.067 7 C -0.154 4.154 8 C 0.032 3.968 9 C 0.077 3.923 10 H 0.084 0.916 11 C -0.541 4.541 12 H 0.079 0.921 13 C -0.136 4.136 14 N -0.518 5.518 15 Si 0.717 3.283 16 H -0.206 1.206 17 H -0.212 1.212 18 H -0.197 1.197 19 C -0.139 4.139 20 C -0.237 4.237 21 C -0.207 4.207 22 C -0.157 4.157 23 H 0.069 0.931 24 H 0.112 0.888 25 H 0.070 0.930 26 H 0.141 0.859 27 H 0.146 0.854 28 H 0.073 0.927 29 H 0.104 0.896 30 H 0.106 0.894 31 H 0.096 0.904 32 H 0.095 0.905 33 H 0.114 0.886 34 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -7.685 0.414 -5.895 9.694 hybrid contribution -0.317 0.739 1.104 1.366 sum -8.002 1.154 -4.791 9.397 Atomic orbital electron populations 1.22954 0.79441 1.03179 1.01045 1.86084 1.20543 1.27190 1.89242 1.18867 0.92273 0.83119 0.97401 1.20670 0.99400 0.90876 1.14257 1.20549 0.91726 0.85799 1.04745 1.98309 1.73432 1.37760 1.97168 1.20805 0.90202 1.00087 1.04344 1.20512 0.98739 0.89784 0.87806 1.17673 0.85431 0.98185 0.90969 0.91557 1.20898 1.44843 0.95202 0.93170 0.92083 1.24985 0.94695 0.94787 0.99084 1.69909 1.48555 1.06393 1.26926 0.86624 0.78502 0.79935 0.83243 1.20560 1.21233 1.19695 1.22430 0.94716 1.00194 0.96569 1.23000 1.07295 0.98010 0.95347 1.22731 0.94922 1.00527 1.02518 1.20508 0.90165 0.99323 1.05749 0.93060 0.88799 0.93016 0.85864 0.85411 0.92701 0.89565 0.89413 0.90433 0.90463 0.88603 0.85218 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.36 9.81 101.05 0.99 1.35 16 2 O -0.32 -5.53 10.50 -19.44 -0.20 -5.73 16 3 C 0.13 2.48 6.69 -39.23 -0.26 2.22 16 4 C -0.23 -4.17 8.82 -39.40 -0.35 -4.52 16 5 C 0.00 -0.03 6.32 -39.52 -0.25 -0.28 16 6 Cl -0.10 -1.55 28.95 -51.86 -1.50 -3.05 16 7 C -0.14 -2.79 8.45 -39.52 -0.33 -3.12 16 8 C 0.03 0.72 4.77 -104.65 -0.50 0.22 16 9 C 0.10 2.21 2.06 -92.93 -0.19 2.02 16 10 H 0.07 1.69 7.07 -51.93 -0.37 1.32 16 11 C -0.50 -12.85 7.72 -34.44 -0.27 -13.11 16 12 H 0.06 1.56 7.81 -52.49 -0.41 1.15 16 13 C 0.07 1.80 5.45 -17.82 -0.10 1.70 16 14 N -0.88 -24.24 12.92 55.43 0.72 -23.53 16 15 Si 0.89 20.83 29.54 -169.99 -5.02 15.81 16 16 H -0.28 -6.63 7.11 56.52 0.40 -6.23 16 17 H -0.29 -6.70 7.11 56.52 0.40 -6.29 16 18 H -0.27 -6.26 7.11 56.52 0.40 -5.86 16 19 C -0.12 -2.40 4.92 -90.62 -0.45 -2.85 16 20 C -0.20 -3.49 10.18 -26.69 -0.27 -3.76 16 21 C -0.17 -3.11 10.02 -26.69 -0.27 -3.38 16 22 C -0.14 -2.98 9.61 -39.43 -0.38 -3.36 16 23 H 0.05 0.56 7.66 -51.93 -0.40 0.16 16 24 H 0.09 0.89 8.14 -51.93 -0.42 0.47 16 25 H 0.05 0.60 7.66 -51.93 -0.40 0.20 16 26 H 0.12 1.88 6.30 -52.49 -0.33 1.55 16 27 H 0.13 2.58 7.79 -52.49 -0.41 2.17 16 28 H 0.26 7.00 8.31 -40.82 -0.34 6.66 16 29 H 0.09 1.65 7.42 -51.93 -0.39 1.26 16 30 H 0.09 1.55 8.08 -51.93 -0.42 1.13 16 31 H 0.08 1.19 8.14 -51.93 -0.42 0.77 16 32 H 0.08 1.25 8.14 -51.93 -0.42 0.83 16 33 H 0.10 1.89 8.14 -51.93 -0.42 1.46 16 34 H 0.13 2.86 7.94 -52.49 -0.42 2.44 16 LS Contribution 306.66 15.07 4.62 4.62 Total: -1.00 -27.16 306.66 -8.37 -35.53 By element: Atomic # 1 Polarization: 7.57 SS G_CDS: -4.36 Total: 3.21 kcal Atomic # 6 Polarization: -24.25 SS G_CDS: -2.62 Total: -26.87 kcal Atomic # 7 Polarization: -24.24 SS G_CDS: 0.72 Total: -23.53 kcal Atomic # 8 Polarization: -5.53 SS G_CDS: -0.20 Total: -5.73 kcal Atomic # 14 Polarization: 20.83 SS G_CDS: -5.02 Total: 15.81 kcal Atomic # 17 Polarization: -1.55 SS G_CDS: -1.50 Total: -3.05 kcal Total LS contribution 4.62 Total: 4.62 kcal Total: -27.16 -8.37 -35.53 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260430362.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.807 kcal (2) G-P(sol) polarization free energy of solvation -27.160 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 0.647 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.369 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.529 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.721 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds