Wall clock time and date at job start Mon Mar 30 2020 06:53:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.35921 * 116.99794 * 2 1 4 4 C 1.38746 * 120.04003 * 359.97438 * 3 2 1 5 5 C 1.38126 * 119.95546 * 179.97438 * 4 3 2 6 6 C 1.50701 * 119.97935 * 180.02562 * 5 4 3 7 7 C 1.38389 * 120.04107 * 0.02562 * 5 4 3 8 8 Cl 1.73602 * 119.95857 * 180.02562 * 7 5 4 9 9 C 1.38345 * 120.08631 * 359.97438 * 7 5 4 10 10 C 1.50701 * 119.98016 * 180.02562 * 9 7 5 11 11 C 1.50709 * 115.54683 * 61.92849 * 10 9 7 12 12 H 1.08002 * 119.99724 * 270.97773 * 11 10 9 13 13 C 1.37877 * 120.00005 * 90.98565 * 11 10 9 14 14 N 1.31512 * 119.99739 * 184.96514 * 13 11 10 15 15 Si 1.86802 * 119.99881 * 4.96404 * 13 11 10 16 16 H 1.48501 * 109.47139 * 86.10815 * 15 13 11 17 17 H 1.48500 * 109.46944 * 206.10907 * 15 13 11 18 18 H 1.48499 * 109.47085 * 326.10714 * 15 13 11 19 19 C 1.52997 * 117.50048 * 276.25864 * 10 9 7 20 20 C 1.52992 * 117.50131 * 207.59803 * 10 9 7 21 21 C 1.38163 * 120.04293 * 359.97438 * 9 7 5 22 22 H 1.08999 * 109.46813 * 180.02562 * 1 2 3 23 23 H 1.09004 * 109.46718 * 299.99781 * 1 2 3 24 24 H 1.08997 * 109.47195 * 60.00002 * 1 2 3 25 25 H 1.07997 * 120.02670 * 0.25620 * 4 3 2 26 26 H 1.09001 * 109.47048 * 89.99751 * 6 5 4 27 27 H 1.09002 * 109.46946 * 209.99520 * 6 5 4 28 28 H 1.08996 * 109.46826 * 329.99375 * 6 5 4 29 29 H 0.97005 * 119.99767 * 180.02562 * 14 13 11 30 30 H 1.09000 * 117.49622 * 359.97438 * 19 10 9 31 31 H 1.08995 * 117.49762 * 145.01845 * 19 10 9 32 32 H 1.09002 * 117.50399 * 214.98231 * 20 10 9 33 33 H 1.09001 * 117.50006 * 359.97413 * 20 10 9 34 34 H 1.07996 * 120.02239 * 180.02562 * 21 9 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0461 1.2111 0.0000 4 6 1.2912 2.3752 -0.0005 5 6 1.9201 3.6050 0.0000 6 6 1.1007 4.8698 0.0000 7 6 3.3021 3.6764 0.0005 8 17 4.0902 5.2232 0.0019 9 6 4.0565 2.5168 0.0011 10 6 5.5614 2.5973 0.0022 11 6 6.1752 3.2710 1.2025 12 1 6.3368 4.3388 1.1985 13 6 6.5306 2.5240 2.3056 14 7 6.9751 3.1221 3.3892 15 14 6.3808 0.6626 2.2607 16 1 7.6152 0.0805 1.6753 17 1 6.1971 0.1474 3.6414 18 1 5.2109 0.2800 1.4299 19 6 6.2599 2.7829 -1.3462 20 6 6.3316 1.4342 -0.6259 21 6 3.4311 1.2848 0.0016 22 1 -0.3633 -1.0277 0.0005 23 1 -0.3633 0.5138 0.8901 24 1 -0.3633 0.5138 -0.8900 25 1 0.2127 2.3199 0.0032 26 1 0.9027 5.1744 1.0277 27 1 1.6503 5.6588 -0.5134 28 1 0.1565 4.6909 -0.5143 29 1 7.2255 2.5965 4.1652 30 1 5.6311 2.8463 -2.2343 31 1 7.1637 3.3919 -1.3652 32 1 7.2825 1.1564 -0.1713 33 1 5.7499 0.6104 -1.0396 34 1 4.0204 0.3797 0.0024 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260433623.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:53:30 Heat of formation + Delta-G solvation = 4.505895 kcal Electronic energy + Delta-G solvation = -18345.468894 eV Core-core repulsion = 15463.429491 eV Total energy + Delta-G solvation = -2882.039403 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 1.83 seconds Orbital eigenvalues (eV) -39.95673 -37.98657 -36.24718 -35.30983 -32.21459 -31.86746 -29.38357 -27.73719 -26.20115 -25.76763 -22.48378 -21.96513 -20.90848 -18.94010 -17.37917 -16.44336 -16.03416 -15.69297 -15.58079 -14.85838 -14.12827 -13.83540 -13.61242 -13.22786 -12.70483 -12.63839 -12.29381 -12.11540 -11.95984 -11.58577 -11.44721 -11.16105 -10.96001 -10.78876 -10.33315 -10.29340 -10.05485 -9.75705 -9.51664 -9.32783 -8.68399 -8.43288 -8.02594 -7.51739 -6.07968 -4.10319 1.72527 1.80141 3.03867 3.32964 3.44283 3.48120 3.49697 4.09197 4.46977 4.86973 4.98292 5.07788 5.17083 5.18483 5.29812 5.37165 5.48665 5.71216 5.81886 5.83575 5.91440 6.00267 6.08556 6.14832 6.40963 6.46724 6.55459 6.65117 6.72211 6.76172 7.07626 7.14125 7.25228 7.66705 7.72046 8.52559 8.99535 9.54532 11.02408 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.016242 B = 0.009906 C = 0.007559 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1723.549116 B = 2825.922673 C = 3703.449680 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.319 6.319 3 C 0.124 3.876 4 C -0.220 4.220 5 C -0.050 4.050 6 C -0.114 4.114 7 C -0.051 4.051 8 Cl -0.058 7.058 9 C 0.033 3.967 10 C 0.034 3.966 11 C -0.474 4.474 12 H 0.089 0.911 13 C 0.079 3.921 14 N -0.892 5.892 15 Si 0.870 3.130 16 H -0.279 1.279 17 H -0.299 1.299 18 H -0.246 1.246 19 C -0.164 4.164 20 C -0.204 4.204 21 C -0.155 4.155 22 H 0.095 0.905 23 H 0.053 0.947 24 H 0.052 0.948 25 H 0.126 0.874 26 H 0.073 0.927 27 H 0.073 0.927 28 H 0.062 0.938 29 H 0.265 0.735 30 H 0.072 0.928 31 H 0.091 0.909 32 H 0.091 0.909 33 H 0.077 0.923 34 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.334 -2.129 -7.950 14.828 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.233 6.233 3 C 0.079 3.921 4 C -0.239 4.239 5 C -0.051 4.051 6 C -0.170 4.170 7 C -0.078 4.078 8 Cl -0.029 7.029 9 C 0.032 3.968 10 C 0.033 3.967 11 C -0.511 4.511 12 H 0.107 0.893 13 C -0.124 4.124 14 N -0.529 5.529 15 Si 0.699 3.301 16 H -0.206 1.206 17 H -0.226 1.226 18 H -0.171 1.171 19 C -0.201 4.201 20 C -0.241 4.241 21 C -0.173 4.173 22 H 0.113 0.887 23 H 0.071 0.929 24 H 0.071 0.929 25 H 0.144 0.856 26 H 0.091 0.909 27 H 0.092 0.908 28 H 0.081 0.919 29 H 0.074 0.926 30 H 0.091 0.909 31 H 0.110 0.890 32 H 0.109 0.891 33 H 0.095 0.905 34 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -12.110 -2.194 -7.749 14.544 hybrid contribution -0.236 -0.903 0.296 0.980 sum -12.346 -3.097 -7.453 14.750 Atomic orbital electron populations 1.22979 0.79128 1.03347 1.01149 1.86066 1.20804 1.27312 1.89109 1.18986 0.92207 0.83759 0.97105 1.20748 0.99221 0.91201 1.12727 1.19420 0.91915 0.95135 0.98587 1.20810 0.98764 0.94811 1.02638 1.20379 0.90969 0.87463 1.08981 1.98316 1.80634 1.27149 1.96782 1.19544 0.96628 0.89675 0.90952 1.18153 0.85383 0.98577 0.94592 1.20263 1.38600 0.96115 0.96088 0.89276 1.25005 0.94045 0.98469 0.94863 1.69894 1.43600 1.35992 1.03365 0.87049 0.79865 0.86450 0.76762 1.20552 1.22610 1.17053 1.22862 1.02672 0.99322 0.95254 1.23082 1.02923 0.91847 1.06215 1.20422 0.90747 0.98563 1.07611 0.88707 0.92860 0.92924 0.85631 0.90885 0.90799 0.91889 0.92565 0.90920 0.89047 0.89059 0.90503 0.84668 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.32 9.81 101.05 0.99 1.31 16 2 O -0.32 -5.15 10.50 -19.49 -0.20 -5.35 16 3 C 0.12 2.24 6.69 -39.22 -0.26 1.98 16 4 C -0.22 -3.56 8.69 -39.43 -0.34 -3.90 16 5 C -0.05 -0.86 5.88 -104.61 -0.62 -1.47 16 6 C -0.11 -1.54 9.61 36.01 0.35 -1.20 16 7 C -0.05 -1.04 6.26 -39.49 -0.25 -1.28 16 8 Cl -0.06 -1.16 24.79 -51.86 -1.29 -2.44 16 9 C 0.03 0.73 5.14 -104.61 -0.54 0.19 16 10 C 0.03 0.78 0.49 -156.81 -0.08 0.71 16 11 C -0.47 -12.89 8.37 -34.44 -0.29 -13.18 16 12 H 0.09 2.63 7.35 -52.49 -0.39 2.24 16 13 C 0.08 2.25 5.47 -17.82 -0.10 2.15 16 14 N -0.89 -26.97 13.96 55.43 0.77 -26.20 16 15 Si 0.87 21.57 24.81 -169.99 -4.22 17.35 16 16 H -0.28 -6.76 6.91 56.52 0.39 -6.37 16 17 H -0.30 -7.60 7.11 56.52 0.40 -7.20 16 18 H -0.25 -5.74 4.09 56.52 0.23 -5.50 16 19 C -0.16 -3.34 9.94 -26.70 -0.27 -3.60 16 20 C -0.20 -4.31 6.75 -26.70 -0.18 -4.49 16 21 C -0.15 -3.17 8.29 -39.44 -0.33 -3.50 16 22 H 0.09 0.78 8.14 -51.93 -0.42 0.36 16 23 H 0.05 0.53 7.66 -51.93 -0.40 0.13 16 24 H 0.05 0.49 7.66 -51.93 -0.40 0.10 16 25 H 0.13 1.61 6.30 -52.49 -0.33 1.28 16 26 H 0.07 0.95 8.14 -51.93 -0.42 0.53 16 27 H 0.07 1.00 6.90 -51.93 -0.36 0.64 16 28 H 0.06 0.69 8.08 -51.93 -0.42 0.27 16 29 H 0.26 7.58 8.31 -40.82 -0.34 7.24 16 30 H 0.07 1.34 8.14 -51.93 -0.42 0.92 16 31 H 0.09 1.85 8.14 -51.93 -0.42 1.43 16 32 H 0.09 2.01 6.30 -51.93 -0.33 1.69 16 33 H 0.08 1.49 6.94 -51.93 -0.36 1.13 16 34 H 0.14 2.79 5.29 -52.49 -0.28 2.51 16 LS Contribution 286.94 15.07 4.32 4.32 Total: -1.00 -30.44 286.94 -6.78 -37.21 By element: Atomic # 1 Polarization: 5.66 SS G_CDS: -4.26 Total: 1.39 kcal Atomic # 6 Polarization: -24.39 SS G_CDS: -1.90 Total: -26.29 kcal Atomic # 7 Polarization: -26.97 SS G_CDS: 0.77 Total: -26.20 kcal Atomic # 8 Polarization: -5.15 SS G_CDS: -0.20 Total: -5.35 kcal Atomic # 14 Polarization: 21.57 SS G_CDS: -4.22 Total: 17.35 kcal Atomic # 17 Polarization: -1.16 SS G_CDS: -1.29 Total: -2.44 kcal Total LS contribution 4.32 Total: 4.32 kcal Total: -30.44 -6.78 -37.21 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260433623.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.717 kcal (2) G-P(sol) polarization free energy of solvation -30.435 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 11.282 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.776 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.211 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.506 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.83 seconds