Wall clock time and date at job start Mon Mar 30 2020 07:18:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.50706 * 109.46885 * 2 1 4 4 C 1.38285 * 119.94085 * 89.99812 * 3 2 1 5 5 C 1.38210 * 120.04247 * 179.97438 * 4 3 2 6 6 Cl 1.73608 * 120.04108 * 180.02562 * 5 4 3 7 7 C 1.38855 * 119.92247 * 0.30475 * 5 4 3 8 8 O 1.35926 * 120.05784 * 179.70138 * 7 5 4 9 9 C 1.38666 * 119.88208 * 359.43844 * 7 5 4 10 10 C 1.50695 * 120.02136 * 180.28026 * 9 7 5 11 11 C 1.50702 * 115.54924 * 280.11283 * 10 9 7 12 12 H 1.08001 * 119.99888 * 145.58493 * 11 10 9 13 13 C 1.37874 * 120.00398 * 325.58812 * 11 10 9 14 14 N 1.31521 * 119.99463 * 359.97438 * 13 11 10 15 15 Si 1.86791 * 120.00415 * 179.97438 * 13 11 10 16 16 H 1.48495 * 109.47224 * 89.99907 * 15 13 11 17 17 H 1.48500 * 109.47358 * 209.99908 * 15 13 11 18 18 H 1.48502 * 109.47036 * 330.00150 * 15 13 11 19 19 C 1.53006 * 117.49855 * 134.41054 * 10 9 7 20 20 C 1.52998 * 117.50210 * 65.78936 * 10 9 7 21 21 C 1.38193 * 119.95463 * 0.51246 * 9 7 5 22 22 H 1.08994 * 109.47027 * 60.00482 * 1 2 3 23 23 H 1.09004 * 109.46697 * 180.02562 * 1 2 3 24 24 H 1.08998 * 109.47595 * 300.00015 * 1 2 3 25 25 H 1.08998 * 109.47595 * 239.99984 * 2 1 3 26 26 H 1.08999 * 109.47410 * 119.99726 * 2 1 3 27 27 H 1.08002 * 119.97768 * 0.02562 * 4 3 2 28 28 H 0.96699 * 114.00958 * 84.96125 * 8 7 5 29 29 H 0.97003 * 119.99429 * 179.97438 * 14 13 11 30 30 H 1.09000 * 117.49663 * 359.97438 * 19 10 9 31 31 H 1.08998 * 117.49770 * 145.01302 * 19 10 9 32 32 H 1.09003 * 117.50174 * 214.97747 * 20 10 9 33 33 H 1.09000 * 117.49682 * 359.97438 * 20 10 9 34 34 H 1.07994 * 119.96428 * 179.76312 * 21 9 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0322 1.4209 0.0000 4 6 2.2622 2.0716 1.1983 5 6 2.7234 3.3745 1.2008 6 17 3.0128 4.1912 2.7052 7 6 2.9495 4.0315 -0.0015 8 8 3.3972 5.3149 -0.0022 9 6 2.7229 3.3742 -1.2012 10 6 2.9732 4.0821 -2.5078 11 6 1.8855 5.0242 -2.9554 12 1 2.1398 5.9286 -3.4882 13 6 0.5656 4.7317 -2.6847 14 7 0.2558 3.6302 -2.0363 15 14 -0.7826 5.8998 -3.2389 16 1 -1.2366 5.5210 -4.6011 17 1 -1.9266 5.8186 -2.2956 18 1 -0.2565 7.2883 -3.2607 19 6 3.7355 3.3166 -3.5913 20 6 4.4176 4.4618 -2.8402 21 6 2.2628 2.0711 -1.1979 22 1 -0.3633 0.5137 -0.8900 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3634 0.5138 0.8899 25 1 1.8934 -0.5138 -0.8899 26 1 1.8933 -0.5138 0.8900 27 1 2.0822 1.5611 2.1329 28 1 4.3578 5.3966 0.0730 29 1 -0.6728 3.4246 -1.8455 30 1 4.0562 2.3012 -3.3589 31 1 3.4501 3.4942 -4.6282 32 1 4.5811 5.3928 -3.3829 33 1 5.1867 4.1999 -2.1136 34 1 2.0826 1.5604 -2.1322 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260439402.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:18:18 Heat of formation + Delta-G solvation = -10.588398 kcal Electronic energy + Delta-G solvation = -18526.919661 eV Core-core repulsion = 15644.225720 eV Total energy + Delta-G solvation = -2882.693940 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 266.081 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -39.30944 -36.37407 -36.24613 -35.57547 -32.55915 -32.13873 -29.54036 -27.81686 -25.64978 -23.19046 -22.52154 -21.33899 -20.51154 -19.03467 -17.48978 -16.49132 -15.35421 -15.02569 -14.70341 -14.42503 -13.87447 -13.63827 -13.19226 -13.02596 -12.52585 -12.35670 -11.86361 -11.61342 -11.35322 -11.08209 -10.98203 -10.87750 -10.65157 -10.47044 -10.43488 -10.29856 -10.18290 -10.03370 -9.33140 -9.19157 -8.86870 -8.28409 -7.74762 -7.48078 -5.94229 -4.09789 2.06079 2.22431 2.82046 3.28008 3.36014 3.39539 4.37828 4.49836 4.92044 5.02603 5.34304 5.44254 5.52499 5.69631 5.84149 5.98157 6.01659 6.16382 6.19309 6.26429 6.31821 6.41331 6.57667 6.63683 6.70506 6.74137 6.81370 6.93012 7.14442 7.20405 7.41364 7.61171 7.70098 7.83958 8.29868 8.52654 8.85273 9.49361 10.96577 Molecular weight = 266.08amu Principal moments of inertia in cm(-1) A = 0.014421 B = 0.009192 C = 0.008051 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1941.173039 B = 3045.405916 C = 3476.853930 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.072 4.072 3 C -0.099 4.099 4 C -0.122 4.122 5 C -0.071 4.071 6 Cl -0.094 7.094 7 C 0.108 3.892 8 O -0.472 6.472 9 C 0.029 3.971 10 C 0.090 3.910 11 C -0.479 4.479 12 H 0.063 0.937 13 C 0.073 3.927 14 N -0.870 5.870 15 Si 0.895 3.105 16 H -0.281 1.281 17 H -0.286 1.286 18 H -0.273 1.273 19 C -0.207 4.207 20 C -0.201 4.201 21 C -0.027 4.027 22 H 0.065 0.935 23 H 0.046 0.954 24 H 0.051 0.949 25 H 0.065 0.935 26 H 0.060 0.940 27 H 0.116 0.884 28 H 0.369 0.631 29 H 0.261 0.739 30 H 0.066 0.934 31 H 0.081 0.919 32 H 0.079 0.921 33 H 0.065 0.935 34 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.441 -5.455 4.683 8.451 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C -0.109 4.109 3 C -0.100 4.100 4 C -0.141 4.141 5 C -0.098 4.098 6 Cl -0.066 7.066 7 C 0.062 3.938 8 O -0.279 6.279 9 C 0.028 3.972 10 C 0.090 3.910 11 C -0.517 4.517 12 H 0.081 0.919 13 C -0.131 4.131 14 N -0.505 5.505 15 Si 0.723 3.277 16 H -0.207 1.207 17 H -0.212 1.212 18 H -0.198 1.198 19 C -0.245 4.245 20 C -0.238 4.238 21 C -0.046 4.046 22 H 0.084 0.916 23 H 0.065 0.935 24 H 0.070 0.930 25 H 0.084 0.916 26 H 0.078 0.922 27 H 0.134 0.866 28 H 0.222 0.778 29 H 0.071 0.929 30 H 0.085 0.915 31 H 0.099 0.901 32 H 0.098 0.902 33 H 0.084 0.916 34 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges 3.671 -5.338 4.840 8.087 hybrid contribution -0.422 0.661 -0.032 0.785 sum 3.249 -4.677 4.809 7.454 Atomic orbital electron populations 1.21722 0.95058 1.00411 1.02923 1.20369 0.96097 0.92876 1.01555 1.19566 1.01664 0.96160 0.92623 1.20376 1.03219 0.92727 0.97802 1.21182 1.09230 0.94044 0.85340 1.98287 1.95080 1.80005 1.33212 1.17914 1.01693 0.84333 0.89862 1.84962 1.25348 1.21828 1.95764 1.19328 0.93326 0.91699 0.92849 1.17594 0.89432 0.95703 0.88269 1.20392 0.89171 1.05727 1.36360 0.91911 1.24969 0.98677 0.95226 0.94254 1.69965 1.18117 1.23651 1.38816 0.86539 0.81467 0.81478 0.78252 1.20707 1.21176 1.19829 1.23118 1.08193 0.94281 0.98910 1.22856 0.97804 0.98967 1.04212 1.20507 0.93876 0.93750 0.96435 0.91595 0.93518 0.93012 0.91586 0.92155 0.86640 0.77818 0.92857 0.91499 0.90079 0.90212 0.91597 0.86408 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.15 9.89 37.16 0.37 -1.78 16 2 C -0.07 -1.08 6.06 -27.88 -0.17 -1.25 16 3 C -0.10 -1.86 5.13 -104.60 -0.54 -2.39 16 4 C -0.12 -2.28 9.48 -39.57 -0.38 -2.65 16 5 C -0.07 -1.42 6.33 -39.36 -0.25 -1.67 16 6 Cl -0.09 -1.67 28.51 -51.86 -1.48 -3.14 16 7 C 0.11 2.36 6.65 -39.19 -0.26 2.10 16 8 O -0.47 -9.95 12.18 -19.51 -0.24 -10.19 16 9 C 0.03 0.66 3.51 -104.48 -0.37 0.30 16 10 C 0.09 2.13 1.52 -156.81 -0.24 1.90 16 11 C -0.48 -12.76 9.06 -34.44 -0.31 -13.07 16 12 H 0.06 1.69 7.81 -52.49 -0.41 1.28 16 13 C 0.07 1.94 5.37 -17.82 -0.10 1.84 16 14 N -0.87 -23.14 10.02 55.43 0.56 -22.58 16 15 Si 0.89 21.17 29.54 -169.99 -5.02 16.15 16 16 H -0.28 -6.54 7.11 56.52 0.40 -6.14 16 17 H -0.29 -6.82 7.11 56.52 0.40 -6.42 16 18 H -0.27 -6.50 7.11 56.52 0.40 -6.10 16 19 C -0.21 -4.38 9.55 -26.73 -0.26 -4.63 16 20 C -0.20 -4.11 9.68 -26.73 -0.26 -4.37 16 21 C -0.03 -0.58 7.10 -39.60 -0.28 -0.86 16 22 H 0.06 1.12 8.14 -51.93 -0.42 0.70 16 23 H 0.05 0.58 8.14 -51.93 -0.42 0.15 16 24 H 0.05 0.78 8.14 -51.93 -0.42 0.36 16 25 H 0.07 0.93 8.08 -51.93 -0.42 0.51 16 26 H 0.06 0.79 8.08 -51.93 -0.42 0.37 16 27 H 0.12 1.89 8.06 -52.49 -0.42 1.46 16 28 H 0.37 6.02 9.06 45.56 0.41 6.43 16 29 H 0.26 6.81 8.31 -40.82 -0.34 6.47 16 30 H 0.07 1.31 8.00 -51.93 -0.42 0.89 16 31 H 0.08 1.72 8.14 -51.93 -0.42 1.30 16 32 H 0.08 1.61 8.14 -51.93 -0.42 1.19 16 33 H 0.07 1.22 8.14 -51.93 -0.42 0.79 16 34 H 0.12 2.55 7.92 -52.49 -0.42 2.13 16 LS Contribution 305.08 15.07 4.60 4.60 Total: -1.00 -27.96 305.08 -8.38 -36.34 By element: Atomic # 1 Polarization: 9.14 SS G_CDS: -3.76 Total: 5.37 kcal Atomic # 6 Polarization: -23.51 SS G_CDS: -3.03 Total: -26.54 kcal Atomic # 7 Polarization: -23.14 SS G_CDS: 0.56 Total: -22.58 kcal Atomic # 8 Polarization: -9.95 SS G_CDS: -0.24 Total: -10.19 kcal Atomic # 14 Polarization: 21.17 SS G_CDS: -5.02 Total: 16.15 kcal Atomic # 17 Polarization: -1.67 SS G_CDS: -1.48 Total: -3.14 kcal Total LS contribution 4.60 Total: 4.60 kcal Total: -27.96 -8.38 -36.34 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260439402.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.753 kcal (2) G-P(sol) polarization free energy of solvation -27.964 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.211 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.377 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.341 kcal (6) G-S(sol) free energy of system = (1) + (5) -10.588 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds